BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010437
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   473   e-131
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   404   e-110
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   384   e-104
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   337   2e-90
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              306   7e-81

>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  473 bits (1218), Expect = e-131
 Identities = 247/343 (72%), Positives = 263/343 (76%)
 Frame = +3

Query: 3    GLLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAATHDIKTPFMTCPLRPN 182
            G+LASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAA  DIKTPFMTCPLR +
Sbjct: 1131 GVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHD 1190

Query: 183  KSMEDAICLADKLKKITVADIIKSMKVSVVPVAVRDGCICSIYKLVMKLYKPKHYPKYTD 362
            KSM+DAICLADKLKKITVADIIKSMKVSVVPV V  G +CSIYKLVMKLYK K YP+YTD
Sbjct: 1191 KSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTD 1250

Query: 363  TTLDVWEETLRVGFVRELEDAIENHITLLSKISGIKNFKTDPESNSSNGLEDVHGNGSES 542
             TLD WEETLRV FVRELEDAI+NH+TLLSKISGIK FKTDP+SN SN  ED H NGSES
Sbjct: 1251 ITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSES 1310

Query: 543  EKKGQANXXXXXXXXXXXXXXXXXXLGLDAQKRKQQGTDEVDYEDGPEEEMHXXXXXXXX 722
            EKKGQ N                  LG DAQKRK QGTDEVDYEDGPEEE H        
Sbjct: 1311 EKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEI 1370

Query: 723  XXXXXXXXXXXXXXXXXXVTLEANNSQGLESPSKPKSIDEKDGLKAEKRKSGPTRKKYDR 902
                                 +ANNS+GLE PSK K+IDEK  LK EK+KS PT KKYDR
Sbjct: 1371 EGDEDGSDVDANENYNN--VTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDR 1428

Query: 903  AVFVKAEGMHFEIHFKFTDEPHILLAQIAQRAAKKVCIQNFGK 1031
            A+FV+A+G HFEIHF+FT EPHILL QIAQR AKKVCIQNFGK
Sbjct: 1429 AIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGK 1471


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  404 bits (1037), Expect = e-110
 Identities = 218/344 (63%), Positives = 252/344 (73%), Gaps = 1/344 (0%)
 Frame = +3

Query: 3    GLLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAATHDIKTPFMTCPLRPN 182
            G+LASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRL EI++AA+ +IKTPFMTCPLRPN
Sbjct: 1117 GVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLHEIVVAASKNIKTPFMTCPLRPN 1176

Query: 183  KSMEDAICLADKLKKITVADIIKSMKVSVVPVAVRDGCICSIYKLVMKLYKPKHYPKYTD 362
            KSMEDAI LADK+KKITVADII+SMKVSVVPVAV++G ICSIYKL MKL+KPKHYPKYTD
Sbjct: 1177 KSMEDAIRLADKMKKITVADIIESMKVSVVPVAVKEGRICSIYKLTMKLHKPKHYPKYTD 1236

Query: 363  TTLDVWEETLRVGFVRELEDAIENHITLLSKISGIKNFKTDPESNSSNGLEDVHGNGSES 542
             TL+ WEETLRVGFVRELEDAIENHI+LL++ISGIK+F+   +SNSSNGL++ H N S S
Sbjct: 1237 VTLEDWEETLRVGFVRELEDAIENHISLLARISGIKDFQ--GKSNSSNGLDNDHSNESAS 1294

Query: 543  EKKGQANXXXXXXXXXXXXXXXXXXLGLDAQKRKQQGTDEVDYEDGPEEEMHXXXXXXXX 722
             + GQ +                   G DAQK KQ+ TDEVDY+DGPEEE H        
Sbjct: 1295 NQNGQTDDDDEVGDTEDAEED-----GFDAQKSKQRATDEVDYDDGPEEETHDGEKSEDV 1349

Query: 723  XXXXXXXXXXXXXXXXXXVTLEAN-NSQGLESPSKPKSIDEKDGLKAEKRKSGPTRKKYD 899
                                +E N +   +E     K++  ++  K++KRK  P  KKYD
Sbjct: 1350 EVSEDGKDDEDDNG------VEVNGDDSDIEVNDSDKNVTLEETSKSKKRKFEPASKKYD 1403

Query: 900  RAVFVKAEGMHFEIHFKFTDEPHILLAQIAQRAAKKVCIQNFGK 1031
            R V+VKA GM FEIHFKF  EPHILLAQIAQR A+KVCIQNFGK
Sbjct: 1404 RRVYVKAGGMRFEIHFKFIGEPHILLAQIAQRTAEKVCIQNFGK 1447


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA190-like [Glycine max]
          Length = 1568

 Score =  384 bits (985), Expect = e-104
 Identities = 218/345 (63%), Positives = 238/345 (68%), Gaps = 2/345 (0%)
 Frame = +3

Query: 3    GLLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAATHDIKTPFMTCPLRPN 182
            G+LASQSVGEPATQMT +  H +     NVTLGIP LQEILMAA  DIKTPFMTCPLR  
Sbjct: 1076 GVLASQSVGEPATQMTXDFLH-SFHXWSNVTLGIPCLQEILMAAARDIKTPFMTCPLRHE 1134

Query: 183  KSMEDAICLADKLKKITVADIIKSMKVSVVPVAVRDGCICSIYKLVMKLYKPKHYPKYTD 362
            KSM+DAICLAD LKKITVADIIKSMKVSVVPV V  G ICSIYKLVMKLYK K YP+YTD
Sbjct: 1135 KSMKDAICLADXLKKITVADIIKSMKVSVVPVTVLGGQICSIYKLVMKLYKSKQYPEYTD 1194

Query: 363  TTLDVWEETLRVGFVRELEDAIENHITLLSKISGIKNFKTDPESNSSNGLEDVHGNGSES 542
             TL+ WEETLRV FVRELEDAIENH+ LLSKISGIK  K  P+SN SN  ED H NGSES
Sbjct: 1195 ITLEDWEETLRVNFVRELEDAIENHMALLSKISGIKKIKDRPQSNYSNSSEDAHDNGSES 1254

Query: 543  EKKGQANXXXXXXXXXXXXXXXXXXLGLDAQKRKQQGTDEVDYEDGPEEEMHXXXXXXXX 722
            EKKGQ+N                  LG DAQKRK QGTDEVDYEDGPEEE H        
Sbjct: 1255 EKKGQSN-DEDDDGVVVEDTEGNEDLGSDAQKRKLQGTDEVDYEDGPEEETHDG------ 1307

Query: 723  XXXXXXXXXXXXXXXXXXVTLEANNSQGLESPSKPKSIDEKDG--LKAEKRKSGPTRKKY 896
                                 E + + G E  S    ++E D   LK EK+KS PT K+Y
Sbjct: 1308 ---------------------ELSGNXGDEDGS-DVDVNENDNNKLKREKKKSEPT-KRY 1344

Query: 897  DRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQRAAKKVCIQNFGK 1031
            D A+FV+A+GMHFEIHF+FT EPHILL QI QR AKK C+QNFGK
Sbjct: 1345 DWAIFVEAKGMHFEIHFRFTGEPHILLTQIVQRTAKKFCLQNFGK 1389


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  337 bits (865), Expect = 2e-90
 Identities = 190/361 (52%), Positives = 240/361 (66%), Gaps = 18/361 (4%)
 Frame = +3

Query: 3    GLLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAATHDIKTPFMTCPLRPN 182
            G+LA+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A+ DIKTP MTCPL+  
Sbjct: 1152 GVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPLQEG 1211

Query: 183  KSMEDAICLADKLKKITVADIIKSMKVSVVPVAVRDGCICSIYKLVMKLYKPKHYPKYTD 362
            ++ EDA  LADKL+K+TVADI++SM+VSVVP A++DG +C IYKL MKLY+P HYP+Y +
Sbjct: 1212 RTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYAN 1271

Query: 363  TTLDVWEETLRVGFVRELEDAIENHITLLSKISGIKNFKTDPESNSSNGL-EDVHGNGSE 539
             +++ WEETL V F+RELEDAI+NH+ LLS+ISGIK+F  +  S +S    EDV G+ S 
Sbjct: 1272 ISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSH 1331

Query: 540  SEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQKRKQQGTDEVDYEDGPEEEMH-----XX 704
             E++   N                  LGLDAQKRK Q TDE+DY+DG EEE++       
Sbjct: 1332 REERDDDN--------DDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTAS 1383

Query: 705  XXXXXXXXXXXXXXXXXXXXXXXXVTLEANNSQGLESPSKPKSIDE-----KDGLKAEKR 869
                                    +  EA+ +  L  PSKPKS  +       G K++ +
Sbjct: 1384 EEESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDK 1443

Query: 870  KSGPTRKK-------YDRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQRAAKKVCIQNFG 1028
            K  P  K+       +DRA+FV+A  MHFE+HFKFT+EPHILLA+IAQ+ AKKV IQN G
Sbjct: 1444 KKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPG 1503

Query: 1029 K 1031
            K
Sbjct: 1504 K 1504


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  306 bits (783), Expect = 7e-81
 Identities = 179/346 (51%), Positives = 218/346 (63%), Gaps = 3/346 (0%)
 Frame = +3

Query: 3    GLLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAATHDIKTPFMTCPLRPN 182
            G+LA+QSVGEP+TQMTLNTFHLAGRGE+NVTLGIPRLQEILM A +DIKTP MTCPL+  
Sbjct: 1151 GVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMG 1210

Query: 183  KSMEDAICLADKLKKITVADIIKSMKVSVVPVAVRDGCICSIYKLVMKLYKPKHYPKYTD 362
            +S +DA  LA KLKK+TVADI +SM+VS+VP  V+D   CSIYKL MKLY+P  YP +T 
Sbjct: 1211 RSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTG 1270

Query: 363  TTLDVWEETLRVGFVRELEDAIENHITLLSKISGIKNFKTDPESNSSNGL-EDVHGNGSE 539
             +L+  EETL   FVRELEDAI+NH+ LLSKISGIKNF  D  S +S    ED  G+G  
Sbjct: 1271 ISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLA 1330

Query: 540  SEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQKRKQQGTDEVDYEDGPEEEMHXXXXXXX 719
                 + +                  LGLDAQKRKQQ +DE+DY D  E E         
Sbjct: 1331 GGNGDEDD--------DGEDDGGAEDLGLDAQKRKQQASDEMDYGDS-EGEPDEGEPSAG 1381

Query: 720  XXXXXXXXXXXXXXXXXXXVTLEANNSQGLESPSKPKSIDEKDGLKAEKRKS--GPTRKK 893
                               V +     +  + PSK KS   K      KRK      +K 
Sbjct: 1382 LTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKD 1441

Query: 894  YDRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQRAAKKVCIQNFGK 1031
            +DRA+ VKA+G +FE+HF+FT+EPHILLAQIAQ+AA KV I++ GK
Sbjct: 1442 FDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGK 1487