BLASTX nr result

ID: Glycyrrhiza24_contig00010435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010435
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   229   2e-58
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   227   7e-58
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   227   9e-58
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...   227   9e-58
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   222   3e-56

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  229 bits (584), Expect = 2e-58
 Identities = 117/149 (78%), Positives = 128/149 (85%), Gaps = 1/149 (0%)
 Frame = -3

Query: 445 ASLKPYQVEGVSWLIRRYKLGVNVVLGDEMGLGKTLQAISFLSYLKVRRLSLGPFLVICP 266
           A+LKP+QVEGVSWLIRRY LGVNVVLGDEMGLGKTLQAISFLSY+KV + S GPFLV+CP
Sbjct: 35  ATLKPHQVEGVSWLIRRYLLGVNVVLGDEMGLGKTLQAISFLSYMKVHQKSPGPFLVLCP 94

Query: 265 LSVTDGWVSEMVKFAPKLEVFKYVGDKEYRRSLRMKIREHVTRKSSTPNV-ILPFDLLLT 89
           LSVTDGWVSE+  FAPKL V +YVGDKE+RRSLR  I E V  + S  +V  LPFDLLLT
Sbjct: 95  LSVTDGWVSEIANFAPKLRVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVSALPFDLLLT 154

Query: 88  TYDIALMDKDFLSQIPWQYAIIDEAQRLK 2
           TYDIALMD+ FLSQIPW YAIIDEAQRLK
Sbjct: 155 TYDIALMDQHFLSQIPWHYAIIDEAQRLK 183


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  227 bits (579), Expect = 7e-58
 Identities = 109/149 (73%), Positives = 129/149 (86%), Gaps = 1/149 (0%)
 Frame = -3

Query: 445 ASLKPYQVEGVSWLIRRYKLGVNVVLGDEMGLGKTLQAISFLSYLKVRRLSLGPFLVICP 266
           A+LKP+QVEGV WLIRRY LGVNV+LGDEMGLGKTLQA+ FLSYLK +++S GPFLV+CP
Sbjct: 35  ATLKPHQVEGVFWLIRRYLLGVNVILGDEMGLGKTLQAVCFLSYLKAQQISAGPFLVLCP 94

Query: 265 LSVTDGWVSEMVKFAPKLEVFKYVGDKEYRRSLRMKIREHV-TRKSSTPNVILPFDLLLT 89
           LSVTDGW+SEM KF PKL+  +YVGDK++RR+LR  + +HV    SST   +LPFD+LLT
Sbjct: 95  LSVTDGWISEMAKFTPKLKALRYVGDKDHRRNLRRNMYQHVKNHPSSTDGSLLPFDVLLT 154

Query: 88  TYDIALMDKDFLSQIPWQYAIIDEAQRLK 2
           TYDIALMD++FLSQIPW YAIIDEAQRLK
Sbjct: 155 TYDIALMDQNFLSQIPWHYAIIDEAQRLK 183


>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 1-like [Cucumis sativus]
          Length = 867

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 445 ASLKPYQVEGVSWLIRRYKLGVNVVLGDEMGLGKTLQAISFLSYLKVRRLSLGPFLVICP 266
           A+LKPYQ++GV WLIRRY LGVNV+LGDEMGLGKTLQAISFLSYLKV ++S  PFLV+CP
Sbjct: 35  ATLKPYQIDGVQWLIRRYHLGVNVILGDEMGLGKTLQAISFLSYLKVHQISPTPFLVLCP 94

Query: 265 LSVTDGWVSEMVKFAPKLEVFKYVGDKEYRRSLRMKIREHVTRKSSTPNVILPFDLLLTT 86
           LSVTDGWVSE+VKFAP L+V +YVGDKE RR+ R ++ EH T +    + + PFD+LLTT
Sbjct: 95  LSVTDGWVSEIVKFAPCLKVLQYVGDKETRRNARRRMCEHAT-EQPVSDALFPFDILLTT 153

Query: 85  YDIALMDKDFLSQIPWQYAIIDEAQRLK 2
           YDIALMD+DFLSQIPWQYA+IDEAQRLK
Sbjct: 154 YDIALMDQDFLSQIPWQYAVIDEAQRLK 181


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Cucumis sativus]
          Length = 868

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 445 ASLKPYQVEGVSWLIRRYKLGVNVVLGDEMGLGKTLQAISFLSYLKVRRLSLGPFLVICP 266
           A+LKPYQ++GV WLIRRY LGVNV+LGDEMGLGKTLQAISFLSYLKV ++S  PFLV+CP
Sbjct: 35  ATLKPYQIDGVQWLIRRYHLGVNVILGDEMGLGKTLQAISFLSYLKVHQISPTPFLVLCP 94

Query: 265 LSVTDGWVSEMVKFAPKLEVFKYVGDKEYRRSLRMKIREHVTRKSSTPNVILPFDLLLTT 86
           LSVTDGWVSE+VKFAP L+V +YVGDKE RR+ R ++ EH T +    + + PFD+LLTT
Sbjct: 95  LSVTDGWVSEIVKFAPCLKVLQYVGDKETRRNARRRMCEHAT-EQPVSDALFPFDILLTT 153

Query: 85  YDIALMDKDFLSQIPWQYAIIDEAQRLK 2
           YDIALMD+DFLSQIPWQYA+IDEAQRLK
Sbjct: 154 YDIALMDQDFLSQIPWQYAVIDEAQRLK 181


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  222 bits (565), Expect = 3e-56
 Identities = 117/157 (74%), Positives = 128/157 (81%), Gaps = 9/157 (5%)
 Frame = -3

Query: 445 ASLKPYQVEGVSWLIRRYKLGVNVVLG--------DEMGLGKTLQAISFLSYLKVRRLSL 290
           A+LKP+QVEGVSWLIRRY LGVNVVLG        DEMGLGKTLQAISFLSY+KV + S 
Sbjct: 35  ATLKPHQVEGVSWLIRRYLLGVNVVLGRVFIVYAGDEMGLGKTLQAISFLSYMKVHQKSP 94

Query: 289 GPFLVICPLSVTDGWVSEMVKFAPKLEVFKYVGDKEYRRSLRMKIREHVTRKSSTPNV-I 113
           GPFLV+CPLSVTDGWVSE+  FAPKL V +YVGDKE+RRSLR  I E V  + S  +V  
Sbjct: 95  GPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVSA 154

Query: 112 LPFDLLLTTYDIALMDKDFLSQIPWQYAIIDEAQRLK 2
           LPFDLLLTTYDIALMD+ FLSQIPW YAIIDEAQRLK
Sbjct: 155 LPFDLLLTTYDIALMDQHFLSQIPWHYAIIDEAQRLK 191


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