BLASTX nr result

ID: Glycyrrhiza24_contig00010396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010396
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula] gi|3554...   509   e-142
gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]   509   e-142
gb|ACU21557.1| phytochrome B [Medicago sativa]                        503   e-140
gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]                503   e-140
ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Gly...   498   e-139

>ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula] gi|355483782|gb|AES64985.1|
           Phytochrome b1 [Medicago truncatula]
          Length = 1198

 Score =  509 bits (1311), Expect = e-142
 Identities = 263/306 (85%), Positives = 278/306 (90%), Gaps = 3/306 (0%)
 Frame = +3

Query: 72  TMRKAIAQYTEDARLHAVFEQSGDTFDYSQSLRVTA---SESVPEQQITAYLAKIQRGGA 242
           +M+KAIAQYTEDARLHAVFEQSGD+FDYSQS+R+T    S+SVPEQQITAYLAKIQRGG 
Sbjct: 43  SMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGGF 102

Query: 243 IQPFGSMIAVDEPSFRILGFSENARDMLGISPQSVPXXXXXXXXXXXXXXXXXXTDVRSL 422
           IQPFGSMIAVDEPSFR+L +SENARDMLGI+PQSVP                  TDVRSL
Sbjct: 103 IQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIG--TDVRSL 160

Query: 423 FTHSSSILLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL 602
           FTHSS +LLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL
Sbjct: 161 FTHSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL 220

Query: 603 SIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVESVRELTGYDRVMVYRFHEDEHGEV 782
           SIAGAVQSQKLAVRAISQLQSLPGGDVK+LCDAVVESVRELTGYDRVMVY+FHEDEHGEV
Sbjct: 221 SIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEV 280

Query: 783 VAESKRPDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHASPVRVVQDEALLQPFCL 962
           VAESKR DLEPYIGLHYPATDIPQASRFLF+QNRVRMIVDC+ASPVRV QDEAL+QP CL
Sbjct: 281 VAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCL 340

Query: 963 VGSTLR 980
           VGSTLR
Sbjct: 341 VGSTLR 346


>gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
          Length = 1152

 Score =  509 bits (1311), Expect = e-142
 Identities = 263/306 (85%), Positives = 278/306 (90%), Gaps = 3/306 (0%)
 Frame = +3

Query: 72  TMRKAIAQYTEDARLHAVFEQSGDTFDYSQSLRVTA---SESVPEQQITAYLAKIQRGGA 242
           +M+KAIAQYTEDARLHAVFEQSGD+FDYSQS+R+T    S+SVPEQQITAYLAKIQRGG 
Sbjct: 43  SMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGGF 102

Query: 243 IQPFGSMIAVDEPSFRILGFSENARDMLGISPQSVPXXXXXXXXXXXXXXXXXXTDVRSL 422
           IQPFGSMIAVDEPSFR+L +SENARDMLGI+PQSVP                  TDVRSL
Sbjct: 103 IQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIG--TDVRSL 160

Query: 423 FTHSSSILLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL 602
           FTHSS +LLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL
Sbjct: 161 FTHSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPAL 220

Query: 603 SIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVESVRELTGYDRVMVYRFHEDEHGEV 782
           SIAGAVQSQKLAVRAISQLQSLPGGDVK+LCDAVVESVRELTGYDRVMVY+FHEDEHGEV
Sbjct: 221 SIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEV 280

Query: 783 VAESKRPDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHASPVRVVQDEALLQPFCL 962
           VAESKR DLEPYIGLHYPATDIPQASRFLF+QNRVRMIVDC+ASPVRV QDEAL+QP CL
Sbjct: 281 VAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCL 340

Query: 963 VGSTLR 980
           VGSTLR
Sbjct: 341 VGSTLR 346


>gb|ACU21557.1| phytochrome B [Medicago sativa]
          Length = 1141

 Score =  503 bits (1296), Expect = e-140
 Identities = 259/303 (85%), Positives = 276/303 (91%)
 Frame = +3

Query: 72  TMRKAIAQYTEDARLHAVFEQSGDTFDYSQSLRVTASESVPEQQITAYLAKIQRGGAIQP 251
           +M+KAIAQY EDARLHAVFEQSGD+FDYSQS+R+T + SVPEQQITAYLAKIQRGG IQP
Sbjct: 42  SMKKAIAQYIEDARLHAVFEQSGDSFDYSQSIRLTTA-SVPEQQITAYLAKIQRGGFIQP 100

Query: 252 FGSMIAVDEPSFRILGFSENARDMLGISPQSVPXXXXXXXXXXXXXXXXXXTDVRSLFTH 431
           FGSMIAVDEPSFR+L +SENARDMLGI+PQSVP                  TDVRSLFTH
Sbjct: 101 FGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIG--TDVRSLFTH 158

Query: 432 SSSILLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA 611
           SS +LLEKAF+AREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA
Sbjct: 159 SSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA 218

Query: 612 GAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVESVRELTGYDRVMVYRFHEDEHGEVVAE 791
           GAVQSQKLAVRAISQLQSLPGGDVK+LCDAVVESVRELTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 219 GAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAE 278

Query: 792 SKRPDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHASPVRVVQDEALLQPFCLVGS 971
           SKR DLEPY+GLHYPATDIPQASRFLF+QNRVRMIVDC+ASPVRV QDEAL+QP CLVGS
Sbjct: 279 SKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGS 338

Query: 972 TLR 980
           TLR
Sbjct: 339 TLR 341


>gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
          Length = 1121

 Score =  503 bits (1295), Expect = e-140
 Identities = 260/307 (84%), Positives = 279/307 (90%), Gaps = 1/307 (0%)
 Frame = +3

Query: 63  ESMTMRKAIAQYTEDARLHAVFEQSGDTFDYSQSLRVTAS-ESVPEQQITAYLAKIQRGG 239
           ES++MRKAIAQYTEDA LHAVFE+SGD+FDY+QS+RVTA+ ESVPEQQITAYLAKIQRGG
Sbjct: 12  ESLSMRKAIAQYTEDAXLHAVFEKSGDSFDYAQSIRVTAATESVPEQQITAYLAKIQRGG 71

Query: 240 AIQPFGSMIAVDEPSFRILGFSENARDMLGISPQSVPXXXXXXXXXXXXXXXXXXTDVRS 419
            IQPFGSMIAVDE SFR+L +SENARDMLGI+PQSVP                   DVRS
Sbjct: 72  FIQPFGSMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLG---VDVRS 128

Query: 420 LFTHSSSILLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPA 599
           LF+ SSS+LLEKAF+AREISLMNPIWIHSRSTGKPFYGILHRID+GVVIDLEPARSEDPA
Sbjct: 129 LFSASSSVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDIGVVIDLEPARSEDPA 188

Query: 600 LSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVESVRELTGYDRVMVYRFHEDEHGE 779
           LSIAGAVQSQKLAVRAISQLQ+LPGGDVKLLCDAVVESVRELTGYDRVMVY+FHEDEHGE
Sbjct: 189 LSIAGAVQSQKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGE 248

Query: 780 VVAESKRPDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHASPVRVVQDEALLQPFC 959
           VVAESKR DLEPYIGLHYPATDIPQASRFLF+QNRVRMIVDC+ASPVRV QDEAL+QP C
Sbjct: 249 VVAESKRVDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 308

Query: 960 LVGSTLR 980
           LVGSTLR
Sbjct: 309 LVGSTLR 315


>ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
          Length = 1149

 Score =  498 bits (1283), Expect = e-139
 Identities = 257/303 (84%), Positives = 275/303 (90%), Gaps = 3/303 (0%)
 Frame = +3

Query: 81  KAIAQYTEDARLHAVFEQSGDT---FDYSQSLRVTASESVPEQQITAYLAKIQRGGAIQP 251
           KAIAQYTEDARLHAVFEQSG++   FDYSQS+RVT SESVPEQQITAYL KIQRGG IQP
Sbjct: 52  KAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVT-SESVPEQQITAYLLKIQRGGFIQP 110

Query: 252 FGSMIAVDEPSFRILGFSENARDMLGISPQSVPXXXXXXXXXXXXXXXXXXTDVRSLFTH 431
           FGSMIAVDEPSFRIL +S+NARDMLGI+PQSVP                  TD+R+LFTH
Sbjct: 111 FGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALG-----TDIRTLFTH 165

Query: 432 SSSILLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA 611
           SS++LLEKAF+AREISLMNPIWIHSR++GKPFYGILHRIDVG+VIDLEPAR+EDPALSIA
Sbjct: 166 SSAVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIA 225

Query: 612 GAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVESVRELTGYDRVMVYRFHEDEHGEVVAE 791
           GAVQSQKLAVRAISQLQSLPGGDVKLLCD VVESVRELTGYDRVMVYRFHEDEHGEVVAE
Sbjct: 226 GAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAE 285

Query: 792 SKRPDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHASPVRVVQDEALLQPFCLVGS 971
           +KRPDLEPYIGLHYPATDIPQASRFLF+QNRVRMIVDCHAS VRVVQDEAL+QP CLVGS
Sbjct: 286 TKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGS 345

Query: 972 TLR 980
           TLR
Sbjct: 346 TLR 348


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