BLASTX nr result

ID: Glycyrrhiza24_contig00010381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010381
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795...   201   4e-49
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...   197   3e-48
gb|AFK36549.1| unknown [Lotus japonicus]                              180   6e-43
ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2...   152   1e-34
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...   144   3e-32

>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
          Length = 206

 Score =  201 bits (510), Expect = 4e-49
 Identities = 110/213 (51%), Positives = 114/213 (53%)
 Frame = +3

Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLXX 302
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 303 XXXXXXXXXXYNHLMVQXXXXXXXXXXXXXXXXGGAQVPGSQXXXXXXXXXXXXXXXXAP 482
                     YNHLMVQ                G AQ+PGSQ                AP
Sbjct: 61  AAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGSQPLMPGMRPPVFPRPPGAP 120

Query: 483 GYVXXXXXXXXXXXXXXXXXXXXXNTMPGQXXXXXXXXXXXXXXXXXXXXXXXXXNGAPL 662
           GYV                     NT+P                           NGAP 
Sbjct: 121 GYVSAPTMPPMLPPPGAPQAPGQLNTIP-------RPPSLAPPPAVPGSTAAPASNGAPS 173

Query: 663 MSSSGMYQANPSAPSPGGYDNYNANAQAPEGNH 761
           M SS MYQANP APS G YDNYNA+AQAPEGNH
Sbjct: 174 MVSSAMYQANPPAPSSGSYDNYNASAQAPEGNH 206


>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score =  197 bits (502), Expect = 3e-48
 Identities = 108/213 (50%), Positives = 112/213 (52%)
 Frame = +3

Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLXX 302
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 303 XXXXXXXXXXYNHLMVQXXXXXXXXXXXXXXXXGGAQVPGSQXXXXXXXXXXXXXXXXAP 482
                     YNHLMVQ                G AQ+PG Q                AP
Sbjct: 61  AAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAP 120

Query: 483 GYVXXXXXXXXXXXXXXXXXXXXXNTMPGQXXXXXXXXXXXXXXXXXXXXXXXXXNGAPL 662
           GYV                       +PGQ                         NGAP 
Sbjct: 121 GYVSAHTMPPMLPPPGAP-------QVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPS 173

Query: 663 MSSSGMYQANPSAPSPGGYDNYNANAQAPEGNH 761
           M SS MYQANP APS G YDNYN +AQAPEGNH
Sbjct: 174 MVSSAMYQANPPAPSSGSYDNYNTSAQAPEGNH 206


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score =  180 bits (456), Expect = 6e-43
 Identities = 104/215 (48%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
 Frame = +3

Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLXX 302
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR+YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 303 XXXXXXXXXXYNHLMV--QXXXXXXXXXXXXXXXXGGAQVPGSQXXXXXXXXXXXXXXXX 476
                     YNHLMV                   G  Q+PG Q                
Sbjct: 61  AAAFQQVGVAYNHLMVPRPGGPPLLPMPQPRFPMPGNVQMPGGQ-PLMPGMRPLMPLPRP 119

Query: 477 APGYVXXXXXXXXXXXXXXXXXXXXXNTMPGQXXXXXXXXXXXXXXXXXXXXXXXXXNGA 656
            PG                         +PGQ                         NGA
Sbjct: 120 VPG----------------------APHVPGQLNAIPRPPSFAPPTTAPGSTAAPASNGA 157

Query: 657 PLMSSSGMYQANPSAPSPGGYDNYNANAQAPEGNH 761
           P M SS MYQ NPSAPS GGYDNYNANAQAP+GNH
Sbjct: 158 PSMVSSAMYQPNPSAPSSGGYDNYNANAQAPDGNH 192


>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  152 bits (385), Expect = 1e-34
 Identities = 92/215 (42%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
 Frame = +3

Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLXX 302
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQS+IDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60

Query: 303 XXXXXXXXXXYN-HLMVQXXXXXXXXXXXXXXXXGGAQV-PGSQXXXXXXXXXXXXXXXX 476
                     YN HLMVQ                  A + PG +                
Sbjct: 61  TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNAPLFPGMR------PPVLPRPMPG 114

Query: 477 APGYVXXXXXXXXXXXXXXXXXXXXXNTMPGQXXXXXXXXXXXXXXXXXXXXXXXXXNGA 656
           APGY+                      ++PGQ                         +G 
Sbjct: 115 APGYMNPPMMPPMMAPPGAP-------SLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGP 167

Query: 657 PLMSSSGMYQANPSAPSPGGYDNYNANAQAPEGNH 761
           P M     YQAN +A + GG+D++N NA APE NH
Sbjct: 168 PSMGPPVTYQANQAATTSGGFDSFNVNAAAPEANH 202


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score =  144 bits (364), Expect = 3e-32
 Identities = 88/215 (40%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
 Frame = +3

Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLXX 302
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 303 XXXXXXXXXXYNHLMVQXXXXXXXXXXXXXXXXGGAQVPGSQ--XXXXXXXXXXXXXXXX 476
                     YN  ++Q                G AQ+P +                   
Sbjct: 61  AAAFQQVGAAYNQHLLQ-RPRLPVLPTPMMPIPGSAQLPANTPLMPGIRPPPVLPRPVPA 119

Query: 477 APGYVXXXXXXXXXXXXXXXXXXXXXNTMPGQXXXXXXXXXXXXXXXXXXXXXXXXXNGA 656
           APGY+                      ++PGQ                         +GA
Sbjct: 120 APGYMSSPAMPPMVAPPGAP-------SLPGQVNGLPRPPMSIPPATVPGSAAVAPPSGA 172

Query: 657 PLMSSSGMYQANPSAPSPGGYDNYNANAQAPEGNH 761
           P M     YQ NP+ P+  G+D++N N    E NH
Sbjct: 173 PSMVPPASYQTNPAPPTSAGFDSFN-NTPNLEANH 206


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