BLASTX nr result

ID: Glycyrrhiza24_contig00010341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010341
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like...   120   5e-25
ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like...   114   3e-23
gb|ABU98949.1| unknown [Lupinus albus]                                106   6e-21
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    90   6e-16
gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]        86   1e-14

>ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 160

 Score =  120 bits (300), Expect = 5e-25
 Identities = 72/163 (44%), Positives = 76/163 (46%)
 Frame = -3

Query: 734 MTEEDKPKAFSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXXX 555
           MT+EDKPKAFSG                 YGTFQGV+NYPPP+P                
Sbjct: 1   MTDEDKPKAFSGGHHNHPPPQPQPFPAAQYGTFQGVANYPPPQPHPAIGFPHPVPPPGAV 60

Query: 554 XXXXXXXXXXXXXXXXXAVPGYAVAEGRPVRERRXXXXXXXXXXXXXXXGFFLAGIPWYV 375
                             VPGYAVAEGRPVRERR               GFFLAGIPWYV
Sbjct: 61  DSSAPPPPYYPGYQA---VPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLAGIPWYV 117

Query: 374 GAIIMLCSRVDYREKPGYVXXXXXXXXXXXXXXXXXXXXADDW 246
           GAIIMLCSRVDYREKPGY+                     DDW
Sbjct: 118 GAIIMLCSRVDYREKPGYIACVVAAVLGTIAIILGVTEGVDDW 160


>ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 161

 Score =  114 bits (285), Expect = 3e-23
 Identities = 71/163 (43%), Positives = 74/163 (45%)
 Frame = -3

Query: 734 MTEEDKPKAFSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXXX 555
           MT+EDKPKAFSG                 YGTFQGV+NYPPP                  
Sbjct: 1   MTDEDKPKAFSGHHHHPPPPQPQPFPAAQYGTFQGVANYPPP--PQPHPAIGFPHPVPPP 58

Query: 554 XXXXXXXXXXXXXXXXXAVPGYAVAEGRPVRERRXXXXXXXXXXXXXXXGFFLAGIPWYV 375
                            AVPGYAVAEGRPVRER                GFFLAGIPWYV
Sbjct: 59  GAADSSAPPPPYYPGYQAVPGYAVAEGRPVRERHLGCCGLGCGWCLFILGFFLAGIPWYV 118

Query: 374 GAIIMLCSRVDYREKPGYVXXXXXXXXXXXXXXXXXXXXADDW 246
           GAIIMLCSRVDYREKPGY+                     DDW
Sbjct: 119 GAIIMLCSRVDYREKPGYIACVVAAVLGTIAIILGVTKGVDDW 161


>gb|ABU98949.1| unknown [Lupinus albus]
          Length = 163

 Score =  106 bits (265), Expect = 6e-21
 Identities = 66/140 (47%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
 Frame = -3

Query: 734 MTEEDKPKA-FSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXX 558
           MTEEDKP                       YGTFQGVSNYPPP PD              
Sbjct: 1   MTEEDKPAVVLHHHHQPPPLSYPQPYPPPQYGTFQGVSNYPPPPPDLHPAIGFPQPAPPH 60

Query: 557 XXXXXXXXXXXXXXXXXXAVPGYAVAEGRPVRERRXXXXXXXXXXXXXXXGFFLAGIPWY 378
                             AVPGYAVAEGRPV ERR               GF LAGIPWY
Sbjct: 61  GFTNQSPPPPPYYTHGYQAVPGYAVAEGRPVSERRLPFCGLGCGWFLFMFGFLLAGIPWY 120

Query: 377 VGAIIMLCSRVDYREKPGYV 318
           VGAI+MLCSRVDYREKPGYV
Sbjct: 121 VGAILMLCSRVDYREKPGYV 140


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 54/133 (40%), Positives = 58/133 (43%)
 Frame = -3

Query: 644 GTFQGVSNYPPPRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGYAVAEGRPV 465
           GTFQGV+NYPPP P                                  VPGYAVAEGRPV
Sbjct: 39  GTFQGVANYPPPHPPQHPVIGFPQPVPPPGASEPPAYPHGYQT-----VPGYAVAEGRPV 93

Query: 464 RERRXXXXXXXXXXXXXXXGFFLAGIPWYVGAIIMLCSRVDYREKPGYVXXXXXXXXXXX 285
           RERR               GFFL  IPWYVG  I+LC+R+D REKPGYV           
Sbjct: 94  RERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFILLCARIDPREKPGYVACTIAAVLATI 153

Query: 284 XXXXXXXXXADDW 246
                    ADDW
Sbjct: 154 AIVLGATKGADDW 166


>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 47/109 (43%), Positives = 53/109 (48%)
 Frame = -3

Query: 644 GTFQGVSNYPPPRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGYAVAEGRPV 465
           GTFQGV+NYPPP                                    VPGYAVAEGRPV
Sbjct: 22  GTFQGVANYPPPHHQPVIGFPQPVPPPGATEPSSPLPPYYAYAYQT--VPGYAVAEGRPV 79

Query: 464 RERRXXXXXXXXXXXXXXXGFFLAGIPWYVGAIIMLCSRVDYREKPGYV 318
           RERR               GFFL  IPWYVG  ++LC+R+D REKPGY+
Sbjct: 80  RERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFVLLCARIDPREKPGYI 128


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