BLASTX nr result

ID: Glycyrrhiza24_contig00010301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010301
         (1596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...   535   e-149
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   521   e-145
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   503   e-140
ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   419   e-115

>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
            gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
            SKIP6 [Medicago truncatula]
          Length = 356

 Score =  535 bits (1378), Expect = e-149
 Identities = 261/349 (74%), Positives = 292/349 (83%), Gaps = 9/349 (2%)
 Frame = -3

Query: 1528 HLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTL 1349
            +LIPSLPDDVA+NCLARV RS H TL+LVSKPI SLL SSLFF ARSL+  TQH+LYL+L
Sbjct: 8    NLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHILYLSL 67

Query: 1348 RTRASSLQWFTLHHNRXXXXXXXXXXPAIGSAYAVLGSTIYVIGGSINDIPSRQVWLLDC 1169
            RTR++SLQ+FTLH+N           P IGSAYAV+   IY+IGGS+ND+PSR VW+LDC
Sbjct: 68   RTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDC 127

Query: 1168 RFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWERVPS 989
            RFHRWL GPSMRV+REFAAAGV+DGKIYVIGGCVPD F+RSANW+E  DP   RWE VPS
Sbjct: 128  RFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPVNNRWESVPS 187

Query: 988  PPEIREKWMHASAVLDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDGVLY 809
            PPEIREKWMHASAV+D +VYAMADRGGV+FDP +GAWESVG ELD+GWRGRA VVDG+LY
Sbjct: 188  PPEIREKWMHASAVVDGKVYAMADRGGVSFDPYNGAWESVGRELDIGWRGRATVVDGILY 247

Query: 808  CYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWEC-----GNGKE 647
            CYDYLG IKGFDVK+GLWKELKGL   LPRFLCGATMADVGGKLVVVWEC     G GKE
Sbjct: 248  CYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNGKGKE 307

Query: 646  MEIWGAEIEVNKNE---DDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 509
            MEIW AEI+V K +    DGELWGEV W N VLS P+GSSIVHC++VAL
Sbjct: 308  MEIWCAEIDVKKKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCNSVAL 356


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score =  521 bits (1343), Expect = e-145
 Identities = 258/345 (74%), Positives = 289/345 (83%), Gaps = 5/345 (1%)
 Frame = -3

Query: 1528 HLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTL 1349
            +LIP LP+DVA+NCLAR+ RS H TLSLVSKPIRSLL S L F  RSLL CTQ LLYLTL
Sbjct: 16   NLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTL 75

Query: 1348 RTRASSLQWFTLHH---NRXXXXXXXXXXPAIGSAYAVLGSTIYVIGGSINDIPSRQVWL 1178
            R+R SSLQWFTLH    N           PA+GSAYAVLG TIYV+GGSI D+PS  VWL
Sbjct: 76   RSRDSSLQWFTLHRTNPNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIQDVPSSHVWL 135

Query: 1177 LDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWER 998
            LDCRFHRWL+GP MRV+REFAAAGV+ GKIYV+GGCV DT++RSANWAE LDPA+GRWER
Sbjct: 136  LDCRFHRWLRGPPMRVAREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPASGRWER 195

Query: 997  VPSPPEIREKWMHASAVLDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDG 818
            V SP E+REKWMHASAV+ DR+YAMADRGG+AF+PRS AWESVG ELD GWRGRACVV+G
Sbjct: 196  VASPTEVREKWMHASAVVGDRIYAMADRGGIAFEPRSCAWESVGGELDHGWRGRACVVEG 255

Query: 817  VLYCYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWECG-NGKEM 644
            +LYCYDYLG IKGFDV RG+W+ELKGL   LPRFLCGATMAD+GGKL VVWEC  NGKEM
Sbjct: 256  ILYCYDYLGKIKGFDVGRGVWEELKGLENALPRFLCGATMADLGGKLCVVWECQCNGKEM 315

Query: 643  EIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 509
            EIW AEI V KN  DGELWG++GWF KVLS P+GSSIV+CS+V+L
Sbjct: 316  EIWCAEIGVKKN-SDGELWGQLGWFGKVLSVPKGSSIVNCSSVSL 359


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score =  503 bits (1296), Expect = e-140
 Identities = 250/347 (72%), Positives = 289/347 (83%), Gaps = 7/347 (2%)
 Frame = -3

Query: 1528 HLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTL 1349
            +LIPSLPDDVA+NCL R+ RS+H TLSLVSKPIR+LL S + F  R+LL CTQ LLYLTL
Sbjct: 17   NLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILFTTRTLLQCTQPLLYLTL 76

Query: 1348 RTRASSL-QWFTLH----HNRXXXXXXXXXXPAIGSAYAVLGSTIYVIGGSINDIPSRQV 1184
            R+R SSL Q+FTLH    +N           PA+GSAYAVLG TIYV+GGSI+D+PS  V
Sbjct: 77   RSRHSSLLQFFTLHRTNPNNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIHDVPSPNV 136

Query: 1183 WLLDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRW 1004
            WLLDCRF+RWL+GPSMRV REFAAAGV+ GKIYV+GGCV DT++RSANWAE LDPA G+W
Sbjct: 137  WLLDCRFNRWLRGPSMRVGREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPATGQW 196

Query: 1003 ERVPSPPEIREKWMHASAVLDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVV 824
            ERV SP E+REKWMHASAV+ +R+YAMADRGG+A++P SGAWESVG ELD GWRGRACVV
Sbjct: 197  ERVASPTEVREKWMHASAVVGERIYAMADRGGIAYEPSSGAWESVGVELDHGWRGRACVV 256

Query: 823  DGVLYCYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWEC-GNGK 650
            +G+LYCYDYLG IKGFDV RG+W+ELKGL   LPRFLCGATMAD+GGKL VVWEC GN  
Sbjct: 257  EGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNEN 316

Query: 649  EMEIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 509
            EMEIW AEI V KN  DGELWG++ WF KVLS P+GSSIV+CS+V+L
Sbjct: 317  EMEIWCAEIGVKKN-SDGELWGQLVWFGKVLSVPKGSSIVNCSSVSL 362


>ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|222852932|gb|EEE90479.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  421 bits (1081), Expect = e-115
 Identities = 214/347 (61%), Positives = 261/347 (75%), Gaps = 8/347 (2%)
 Frame = -3

Query: 1525 LIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTLR 1346
            LIPSLP+D+A+N LAR+ RS H  L+LVSKP RS+L S L +  RSLL+ +QH LYL+LR
Sbjct: 17   LIPSLPNDIALNILARIPRSYHPRLTLVSKPFRSILSSPLLYTTRSLLNTSQHFLYLSLR 76

Query: 1345 T-RASSLQWFTLHHNRXXXXXXXXXXPA---IGSAYAVLGSTIYVIGGSINDIPSRQVWL 1178
                +SLQWFTL+ ++               +GSA+A +G  IYVIGGSINDIPS  VW 
Sbjct: 77   IPTTTSLQWFTLYPDQTKNSLIPLTPAPSPLVGSAFAAVGPKIYVIGGSINDIPSPHVWA 136

Query: 1177 LDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWER 998
            LDCR H W   PSMR+SREFAAAGVVDG+IYVIGGCV DT+A+S NWAE  DP   RW+ 
Sbjct: 137  LDCRSHTWEAVPSMRISREFAAAGVVDGRIYVIGGCVVDTWAKSRNWAEVFDPKTERWDS 196

Query: 997  VPSPPE--IREKWMHASAVLDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVV 824
            V S  +  +REKWMH SAV+++R+Y MADR GV ++P++  WESV +ELDLGWRGRACVV
Sbjct: 197  VDSGKDDLLREKWMHGSAVVNERIYVMADRNGVVYEPKTKRWESVESELDLGWRGRACVV 256

Query: 823  DGVLYCYDYLGNIKGFDVKRGLWKELKGLYC-LPRFLCGATMADVGGKLVVVWE-CGNGK 650
            +G+LYCYDY+GNI+GFDV+ G WKEL+G+   LPRFLCGATMA+VGGKLVVVWE  GN K
Sbjct: 257  NGILYCYDYVGNIRGFDVRNGAWKELRGVEKELPRFLCGATMANVGGKLVVVWERKGNVK 316

Query: 649  EMEIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 509
            EME+W AEIEV +N  +GEL G V W + V   P GSSIVHC AV++
Sbjct: 317  EMEVWCAEIEVEEN-GEGELRGRVEWCDVVHKVPIGSSIVHCLAVSM 362


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  419 bits (1078), Expect = e-115
 Identities = 217/342 (63%), Positives = 256/342 (74%), Gaps = 3/342 (0%)
 Frame = -3

Query: 1525 LIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTLR 1346
            LIP+LPDDVA+ C+ARV RS H  L LV K  RS+L S  FF+ RSLL+C QH LYL +R
Sbjct: 22   LIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVR 81

Query: 1345 TRASSLQWFTLHHN-RXXXXXXXXXXPAIGSAYAVLGSTIYVIGGSINDIPSRQVWLLDC 1169
               + L+WF L+ N R          PAIGSA+A +GS I+V+GGS+ND+ S  V + DC
Sbjct: 82   VNCT-LKWFVLNQNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVASPTVQVFDC 140

Query: 1168 RFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWERVPS 989
            RF  W  GP MRV REFAAAGVV  KIYV+GGC+ DT+A+SANWAE  DPAAGRW  V S
Sbjct: 141  RFGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLVDTWAKSANWAEVFDPAAGRWAGVES 200

Query: 988  PPEIREKWMHASAVLDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDGVLY 809
            P E+REKWMHASAV+++++YAMADRGGV F+P +  W  V TELDLGWRGRACVVDGVLY
Sbjct: 201  PVEVREKWMHASAVVEEKIYAMADRGGVVFEPGTAEWGGVSTELDLGWRGRACVVDGVLY 260

Query: 808  CYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWE-CGNGKEMEIW 635
            CYDYLG I+GFDVK GLWKELKGL   LP+FLCGATMA+VGG LVV+WE  GNGKEMEI 
Sbjct: 261  CYDYLGKIRGFDVKEGLWKELKGLEKGLPKFLCGATMANVGGNLVVLWEGKGNGKEMEIS 320

Query: 634  GAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 509
             AEI + K  D G L G + W + +LS P GS+IVHC AVA+
Sbjct: 321  CAEIAIQKCSDGG-LRGSIVWSDVILSVPIGSAIVHCLAVAV 361


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