BLASTX nr result

ID: Glycyrrhiza24_contig00010283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010283
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...   260   7e-68
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...   246   2e-63
ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...   227   7e-58
ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Gl...   221   6e-56

>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
           gi|355490185|gb|AES71388.1| Auxin response factor
           [Medicago truncatula]
          Length = 593

 Score =  260 bits (665), Expect = 7e-68
 Identities = 125/166 (75%), Positives = 138/166 (83%)
 Frame = +2

Query: 2   LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQF 181
           L PK+WRA AGA  QIPTVNSRVYYFPQGHMDQA+S P NLS  LLSRP+ILC +SAV F
Sbjct: 16  LNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVHF 75

Query: 182 LADPLTDEVFAKLLLHPLIDFSSAIPQPADGGADEGDRVVSFAKTLTPSDANNGGGFSVP 361
           LADP TDEVFAKL L PL DF+   P+     AD+G+R+ SFAK LTPSDANNGGGFSVP
Sbjct: 76  LADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGERISSFAKILTPSDANNGGGFSVP 135

Query: 362 RFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHL 499
           RFCADSIFP LD+  DPP+QNL ITDVHG++WEFRHIYRGTPRRHL
Sbjct: 136 RFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHL 181


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  246 bits (627), Expect = 2e-63
 Identities = 119/172 (69%), Positives = 136/172 (79%), Gaps = 6/172 (3%)
 Frame = +2

Query: 2   LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQF 181
           L+P +W  CAG   +IPT++SRVYYFPQGH DQASS P+NLS  LLS+P +LCR+ +VQF
Sbjct: 16  LDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSAPRNLSPLLLSKPAVLCRVESVQF 75

Query: 182 LADPLTDEVFAKLLLHPLIDF-----SSAIPQPADGGADEGDR-VVSFAKTLTPSDANNG 343
           LADPLTDEVFAKL+LHP+ D      S+  P  A   A  G+  VVSF+K LT SDANNG
Sbjct: 76  LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135

Query: 344 GGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHL 499
           GGFSVPRFCADSIFP L+FQADPPVQNL +TDVHG  WEFRHIYRGTPRRHL
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHL 187


>ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|222856859|gb|EEE94406.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  229 bits (583), Expect = 2e-58
 Identities = 111/177 (62%), Positives = 139/177 (78%), Gaps = 15/177 (8%)
 Frame = +2

Query: 14  IWRACAGAGAQIPTVNSRVYYFPQGHMDQASSP----PQNLSHQLLSRPFILCRISAVQF 181
           IWRACAG+  QIPT+NSRVYYFPQGH++Q+SS     P  LS+  LS+P I C+ISAV F
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60

Query: 182 LADPLTDEVFAKLLLHPLIDFSSAIP------QPADGGA-----DEGDRVVSFAKTLTPS 328
           LADP+TDEVF +LLL PL + S  +P        ++GG      D+ +++++FAK LTPS
Sbjct: 61  LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAFAKILTPS 120

Query: 329 DANNGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHL 499
           DANNGGGFSVPRFCADSIFP L++QA+PPVQ L++TD+HG+SW+FRHIYRGTPRRHL
Sbjct: 121 DANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHL 177


>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
           gi|223546930|gb|EEF48427.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 603

 Score =  227 bits (579), Expect = 7e-58
 Identities = 107/181 (59%), Positives = 139/181 (76%), Gaps = 15/181 (8%)
 Frame = +2

Query: 2   LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLS-----RPFILCRI 166
           ++ +IWRACAG+  QIPT+NSRVYYFPQGH++Q+S+    +S  +LS     +P I C+I
Sbjct: 14  VDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQI 73

Query: 167 SAVQFLADPLTDEVFAKLLLHPLIDFSSAIPQPADGGA----------DEGDRVVSFAKT 316
           SAVQFLADP+TDEV+ KLLL P+  F+ ++P     G           D+ D++V+FAK 
Sbjct: 74  SAVQFLADPVTDEVYTKLLLFPIDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFAKI 133

Query: 317 LTPSDANNGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRH 496
           LTPSDANNGGGFSVPRFCADSIFP L++ A+PPVQ L++TD+HG++W+FRHIYRGTPRRH
Sbjct: 134 LTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPRRH 193

Query: 497 L 499
           L
Sbjct: 194 L 194


>ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  221 bits (562), Expect = 6e-56
 Identities = 114/177 (64%), Positives = 130/177 (73%), Gaps = 11/177 (6%)
 Frame = +2

Query: 2   LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQF 181
           ++PKIWRACAGA  QIP ++SRVYYFPQGHM+ AS P   LS  + S PF+ C +S++ F
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEHAS-PSHYLSPLIRSLPFVPCHVSSLDF 67

Query: 182 LADPLTDEVFAKLLLHPLIDFSSAIPQP-------ADGGADEGDR----VVSFAKTLTPS 328
           LADP +DEVFAK LL PL   S +  QP       A    D+ DR    VVSFAK LTPS
Sbjct: 68  LADPFSDEVFAKFLLTPL---SQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPS 124

Query: 329 DANNGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHL 499
           DANNGGGFSVPRFCADS FP LDF+ADPPVQ LS+ D+HGV W FRHIYRGTPRRHL
Sbjct: 125 DANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHL 181


Top