BLASTX nr result

ID: Glycyrrhiza24_contig00010280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010280
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588487.1| WD repeat-containing protein [Medicago trunc...   103   3e-20
ref|XP_002318441.1| predicted protein [Populus trichocarpa] gi|2...    91   5e-16
ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807...    90   6e-16
ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817...    89   1e-15
ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15

>ref|XP_003588487.1| WD repeat-containing protein [Medicago truncatula]
           gi|358344639|ref|XP_003636395.1| WD repeat-containing
           protein [Medicago truncatula]
           gi|355477535|gb|AES58738.1| WD repeat-containing protein
           [Medicago truncatula] gi|355502330|gb|AES83533.1| WD
           repeat-containing protein [Medicago truncatula]
          Length = 784

 Score =  103 bits (258), Expect(2) = 3e-20
 Identities = 54/93 (58%), Positives = 64/93 (68%)
 Frame = +3

Query: 3   AIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGLPVIV*K*SGLF*DWII 182
           ++HKS YKFLKSSCKSTS+CHAWGLVIVTAGWDGRIKSFHNYGLP            + +
Sbjct: 662 SLHKSAYKFLKSSCKSTSNCHAWGLVIVTAGWDGRIKSFHNYGLPT-----------YEV 710

Query: 183 ESNAFIALLGHIALGKLHAAAEVL*DLKVMVQV 281
             ++ + LL H+ LGKL  AA VL D +    V
Sbjct: 711 SFSSIMDLLRHVVLGKL-LAANVLQDSEATFNV 742



 Score = 21.2 bits (43), Expect(2) = 3e-20
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 293 ITEQVEVRGQTPKGIA 340
           ITEQ  V+GQT K  A
Sbjct: 748 ITEQAAVKGQTLKKTA 763


>ref|XP_002318441.1| predicted protein [Populus trichocarpa] gi|222859114|gb|EEE96661.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   AIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGLPV 140
           A+HKS YKFLK+SC+ST S HAWGLVIVTAGWDGRIKSFHNYGLPV
Sbjct: 607 AMHKSQYKFLKTSCQSTDSSHAWGLVIVTAGWDGRIKSFHNYGLPV 652


>ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807177 [Glycine max]
          Length = 703

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +3

Query: 6   IHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGLPVI 143
           + KS YKFLKSSCKSTSS HAWG+VIVTAGWDGRIKSFHNYGLP++
Sbjct: 657 MRKSEYKFLKSSCKSTSSAHAWGMVIVTAGWDGRIKSFHNYGLPIL 702


>ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817209 [Glycine max]
          Length = 701

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = +3

Query: 6   IHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGLPV 140
           + KS YKFLKSSCKSTSS HAWG+VIVTAGWDGRIKSFHNYGLP+
Sbjct: 655 MRKSEYKFLKSSCKSTSSAHAWGMVIVTAGWDGRIKSFHNYGLPI 699


>ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|222868384|gb|EEF05515.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 6   IHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGLPV 140
           +HKS YKFLK+SC+ST++ HAWGLVIVTAGWDGRIKSFHNYGLPV
Sbjct: 680 MHKSQYKFLKNSCQSTAASHAWGLVIVTAGWDGRIKSFHNYGLPV 724


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