BLASTX nr result

ID: Glycyrrhiza24_contig00010278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010278
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    80   3e-13
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    67   4e-09
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    61   2e-07
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    56   6e-06

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -2

Query: 682 LSWVRIPGMPNSIEGTPCVGSLVPPTL-LSRKDDSMKHKLGDEKTWKKRGDFLSKGFKLT 506
           +SWVRI G+PNSIEGT CVGSLV P+L ++R   S K KL +EK  KKR DFLSKGFKLT
Sbjct: 332 VSWVRISGIPNSIEGTVCVGSLVKPSLMMNRSVQSKKQKLVEEKNKKKRDDFLSKGFKLT 391

Query: 505 L 503
           L
Sbjct: 392 L 392


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = -2

Query: 682 LSWVRIP-GMPNSIEGTPCVGSLVPPTLLSRKDDSMKHKLGDEKTWKKRGDFLSKGFKLT 506
           +S V++P G+ N+IEGT CV SLVPPTLLS +D+S       EK  KKR DFLSKGFKLT
Sbjct: 328 VSCVKLPSGIGNTIEGTVCVQSLVPPTLLSLRDES------QEKNRKKRDDFLSKGFKLT 381

Query: 505 L 503
           L
Sbjct: 382 L 382


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = -2

Query: 652 NSIEGTPCVGSLVPPTLLSRKDDSMKHKLGDEKTWKKRGDFLSKGFKLTL 503
           N+IEGT CV SLVPPTLL+ +D+S       EK  KKR DFLS+GFKLTL
Sbjct: 340 NTIEGTVCVESLVPPTLLNLRDESQ----SQEKNGKKRDDFLSQGFKLTL 385


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%)
 Frame = -2

Query: 694 EDEGLSWVRIPGMPNSIEGTPCVGSLVPPTLLSRKDDSMKHKLGDEKTWKKRGDFLSKGF 515
           E + ++ V+I G+PN  E   C+G+LVPP  L R+       LG E+  K R DFLS+GF
Sbjct: 331 EKKEVALVKIQGLPNLNEAMICLGTLVPPYFLPRQICRKPRALGCERPRKTRDDFLSQGF 390

Query: 514 KLTL 503
           KLTL
Sbjct: 391 KLTL 394


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