BLASTX nr result

ID: Glycyrrhiza24_contig00010272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010272
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541613.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   134   6e-30
emb|CBI29881.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...   129   2e-28
ref|XP_003539640.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   129   3e-28
ref|XP_003627702.1| Zinc finger-like protein [Medicago truncatul...   128   6e-28

>ref|XP_003541613.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 357

 Score =  134 bits (338), Expect = 6e-30
 Identities = 72/98 (73%), Positives = 76/98 (77%), Gaps = 10/98 (10%)
 Frame = +2

Query: 23  ETVTVALRIGLPRMAASSSSDLGS---------RMGEKEDQVNNMIISGHPLE-RFNKGQ 172
           ETVTVAL IGLPRM  SSSSDLG           +GEK  +VN  +IS HPL+ R NKGQ
Sbjct: 124 ETVTVALHIGLPRMDTSSSSDLGPPKVVSTTCMEIGEK-GEVN--MISEHPLDHRLNKGQ 180

Query: 173 YWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGH 286
           YWIPTPSQILIGPTQF CPVCSKTFNRYNNLQMHMWGH
Sbjct: 181 YWIPTPSQILIGPTQFPCPVCSKTFNRYNNLQMHMWGH 218


>emb|CBI29881.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/88 (67%), Positives = 69/88 (78%)
 Frame = +2

Query: 23  ETVTVALRIGLPRMAASSSSDLGSRMGEKEDQVNNMIISGHPLERFNKGQYWIPTPSQIL 202
           ETVTVAL IGLP  +A+  + + S   E  D+  +  +SG+P+ R NKGQYWIPTPSQIL
Sbjct: 89  ETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLNKGQYWIPTPSQIL 148

Query: 203 IGPTQFSCPVCSKTFNRYNNLQMHMWGH 286
           IGPTQFSCPVC KTFNRYNN+QMHMWGH
Sbjct: 149 IGPTQFSCPVCCKTFNRYNNMQMHMWGH 176


>ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 345

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/88 (67%), Positives = 69/88 (78%)
 Frame = +2

Query: 23  ETVTVALRIGLPRMAASSSSDLGSRMGEKEDQVNNMIISGHPLERFNKGQYWIPTPSQIL 202
           ETVTVAL IGLP  +A+  + + S   E  D+  +  +SG+P+ R NKGQYWIPTPSQIL
Sbjct: 119 ETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLNKGQYWIPTPSQIL 178

Query: 203 IGPTQFSCPVCSKTFNRYNNLQMHMWGH 286
           IGPTQFSCPVC KTFNRYNN+QMHMWGH
Sbjct: 179 IGPTQFSCPVCCKTFNRYNNMQMHMWGH 206


>ref|XP_003539640.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 352

 Score =  129 bits (323), Expect = 3e-28
 Identities = 71/98 (72%), Positives = 76/98 (77%), Gaps = 10/98 (10%)
 Frame = +2

Query: 23  ETVTVALRIGLPRMAASSSSDLGS---------RMGEKEDQVNNMIISGHPLE-RFNKGQ 172
           ETVTVAL IGLPRM  +SSSDLG           + EKE+ VN  +IS HPL+ R NKGQ
Sbjct: 120 ETVTVALHIGLPRMD-TSSSDLGPSRVVSTTCMEISEKEE-VN--MISKHPLDNRLNKGQ 175

Query: 173 YWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGH 286
           YWIPTPSQILIGPTQF CPVCSKTFNRYNNLQMHMWGH
Sbjct: 176 YWIPTPSQILIGPTQFPCPVCSKTFNRYNNLQMHMWGH 213


>ref|XP_003627702.1| Zinc finger-like protein [Medicago truncatula]
           gi|355521724|gb|AET02178.1| Zinc finger-like protein
           [Medicago truncatula]
          Length = 340

 Score =  128 bits (321), Expect = 6e-28
 Identities = 69/97 (71%), Positives = 76/97 (78%), Gaps = 9/97 (9%)
 Frame = +2

Query: 23  ETVTVALRIGLPRMAASSSSDLGSRM--------GEKEDQVNNMIISGHPLERFN-KGQY 175
           E+VTVAL+IGLP   ++SSSDLGSRM         EKE+   NMI    PL++ N KGQY
Sbjct: 110 ESVTVALQIGLP---SNSSSDLGSRMVSSNCIEMAEKEEV--NMISEQLPLDKLNNKGQY 164

Query: 176 WIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGH 286
           WIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGH
Sbjct: 165 WIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGH 201


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