BLASTX nr result

ID: Glycyrrhiza24_contig00010269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010269
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      808   0.0  
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...   800   0.0  
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   767   0.0  
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   743   0.0  
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   740   0.0  

>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  808 bits (2086), Expect = 0.0
 Identities = 391/433 (90%), Positives = 417/433 (96%)
 Frame = +3

Query: 3    AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYL 182
            AI+ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA+VDRFYD+IEVGKVYL
Sbjct: 205  AIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAIVDRFYDSIEVGKVYL 264

Query: 183  ISKGSLKPAQKNFNHLKNEWEVFLELNSMIELCPDEDGSIPQQQFSFRPISDIENVDSNS 362
            ISKG+LKPAQKNFNHLKNEWE+ L+LNS +ELCPDEDGS P+QQFSFRPISDIENV+SN+
Sbjct: 265  ISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFRPISDIENVESNA 324

Query: 363  IVDVIGVVTSVNPSVPILRKNGMETQRRILNLKDSSGRSIELTLWGDFCNREGQKLQEMV 542
            I+DVIGVVTSVNPSVPILRKNGMET RRILNLKD+SGRS+ELTLWG+FCNREGQKLQEMV
Sbjct: 325  ILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNSGRSVELTLWGEFCNREGQKLQEMV 384

Query: 543  DAGFFPILAVKSGKVNDFSGKTIGSISTTQLFINPDFPEAHSLRDWFDRVGKDSASLSIS 722
            DAG FPILAVK+GKVN+FSGK+IGSISTTQLFINPDFPEA SLR WFD+VGKDSASLSIS
Sbjct: 385  DAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKDSASLSIS 444

Query: 723  KDINPGGAKNEIRKTVSQIKDEGLGRSDKPDWVTMRATISFIKTDTFCYTACPLMIGDRQ 902
            KDI  GG KNEIRKTVSQI+DEGLGRSDKPDW+T+RATISF+KTDTFCYTACPLMIGDRQ
Sbjct: 445  KDITHGGPKNEIRKTVSQIRDEGLGRSDKPDWITIRATISFMKTDTFCYTACPLMIGDRQ 504

Query: 903  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQILDHTGLTWVTAFQEAGEEIMGYPAK 1082
            CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQI DHTGLTWVTAFQE GEEIMGYPAK
Sbjct: 505  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQEGGEEIMGYPAK 564

Query: 1083 ELYMLKYEQEDDERFGDIIKSRLFNQFVFRLKIKEELYGDEQKVKITVVKADKVNYSSES 1262
            ELY LKYEQEDDERFGDI+KSRLFN FVFRLKIKEELYG+EQKVK TVVKADKVNYS+ES
Sbjct: 565  ELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTVVKADKVNYSAES 624

Query: 1263 RYMLDLISKFCRQ 1301
            RYMLDLISKF R+
Sbjct: 625  RYMLDLISKFGRK 637


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Glycine max]
          Length = 637

 Score =  800 bits (2066), Expect = 0.0
 Identities = 387/433 (89%), Positives = 415/433 (95%)
 Frame = +3

Query: 3    AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYL 182
            AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY+ IEVGKVY+
Sbjct: 205  AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYNVIEVGKVYM 264

Query: 183  ISKGSLKPAQKNFNHLKNEWEVFLELNSMIELCPDEDGSIPQQQFSFRPISDIENVDSNS 362
            ISKGSLKPAQKNFNHLKNEWE+ LE +SM+ELCPDEDGSIP+QQFSFRPISDIENVD+NS
Sbjct: 265  ISKGSLKPAQKNFNHLKNEWEILLESSSMVELCPDEDGSIPRQQFSFRPISDIENVDNNS 324

Query: 363  IVDVIGVVTSVNPSVPILRKNGMETQRRILNLKDSSGRSIELTLWGDFCNREGQKLQEMV 542
            I+DVIGVVTSVNPSVPILRKNGMETQRRIL+LKDSSG S+ELTLWG+FCNREGQ+LQ+MV
Sbjct: 325  ILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSGSSVELTLWGEFCNREGQQLQDMV 384

Query: 543  DAGFFPILAVKSGKVNDFSGKTIGSISTTQLFINPDFPEAHSLRDWFDRVGKDSASLSIS 722
            DAGFFPILAVK+GKVNDFSGK+IGSISTTQLFINPDFPEAHSLR+WF+ VGKDSASLSIS
Sbjct: 385  DAGFFPILAVKTGKVNDFSGKSIGSISTTQLFINPDFPEAHSLREWFELVGKDSASLSIS 444

Query: 723  KDINPGGAKNEIRKTVSQIKDEGLGRSDKPDWVTMRATISFIKTDTFCYTACPLMIGDRQ 902
            KDI PG  KNE+RKTVSQIKDEGLGRSDKPDW+T+RA I FIKTDTFCYTACPLMIGDRQ
Sbjct: 445  KDIIPGALKNEVRKTVSQIKDEGLGRSDKPDWITVRAAILFIKTDTFCYTACPLMIGDRQ 504

Query: 903  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQILDHTGLTWVTAFQEAGEEIMGYPAK 1082
            CNKKVTR G+TRWQCDRCNQEFEECDYRYLLQ QILD TGL WVTAFQEAGEEIM Y AK
Sbjct: 505  CNKKVTRLGNTRWQCDRCNQEFEECDYRYLLQVQILDGTGLAWVTAFQEAGEEIMDYSAK 564

Query: 1083 ELYMLKYEQEDDERFGDIIKSRLFNQFVFRLKIKEELYGDEQKVKITVVKADKVNYSSES 1262
            +LY LK+E++DDE+FG+IIKSRLFNQF+FRLKIKEELYGDEQKVKITVVKADKVNYSSES
Sbjct: 565  DLYFLKHEEQDDEKFGEIIKSRLFNQFMFRLKIKEELYGDEQKVKITVVKADKVNYSSES 624

Query: 1263 RYMLDLISKFCRQ 1301
            RYMLD ISKFCRQ
Sbjct: 625  RYMLDTISKFCRQ 637


>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
            vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
            product [Vitis vinifera]
          Length = 622

 Score =  767 bits (1980), Expect = 0.0
 Identities = 366/429 (85%), Positives = 409/429 (95%)
 Frame = +3

Query: 3    AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYL 182
            AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYD IEVGKVYL
Sbjct: 192  AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYL 251

Query: 183  ISKGSLKPAQKNFNHLKNEWEVFLELNSMIELCPDEDGSIPQQQFSFRPISDIENVDSNS 362
            ISKGSLKPAQKNFNHLKNEWE+FLE +S +ELCPDEDGSIP+QQFSFRPIS+IENV++NS
Sbjct: 252  ISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQFSFRPISEIENVENNS 311

Query: 363  IVDVIGVVTSVNPSVPILRKNGMETQRRILNLKDSSGRSIELTLWGDFCNREGQKLQEMV 542
            I+DVIG+V SVNPSVPILRKNGMETQRRI+NLKD SGRSIELT+WG+FCNREG +LQEM+
Sbjct: 312  ILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMWGEFCNREGHQLQEMI 371

Query: 543  DAGFFPILAVKSGKVNDFSGKTIGSISTTQLFINPDFPEAHSLRDWFDRVGKDSASLSIS 722
            D+G FP+LAVKSGKVNDFSGK++G+IS TQLFINPDF EA +LR+WFDR GK++AS SIS
Sbjct: 372  DSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDRGGKNAASQSIS 431

Query: 723  KDINPGGAKNEIRKTVSQIKDEGLGRSDKPDWVTMRATISFIKTDTFCYTACPLMIGDRQ 902
            +DI P G++NEIRKTVSQIKDEGLGRSDKPDWVT++ATISFIKTDTFCY ACPLMIGDRQ
Sbjct: 432  RDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKATISFIKTDTFCYAACPLMIGDRQ 491

Query: 903  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQILDHTGLTWVTAFQEAGEEIMGYPAK 1082
            CNKKVTRSG+TRWQCDRCNQEFE+CDYRYLLQAQ+ DHTGLTWVTAFQEAGEEI+G  AK
Sbjct: 492  CNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEILGCSAK 551

Query: 1083 ELYMLKYEQEDDERFGDIIKSRLFNQFVFRLKIKEELYGDEQKVKITVVKADKVNYSSES 1262
            ELY+LKYE+EDD RFG+II+SRL NQF+FRLKIKEE+YG+EQ+VKITVVKADKVNY+SES
Sbjct: 552  ELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKVNYTSES 611

Query: 1263 RYMLDLISK 1289
            R++LDLISK
Sbjct: 612  RHLLDLISK 620


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546518|gb|EEF48016.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 670

 Score =  743 bits (1917), Expect = 0.0
 Identities = 350/429 (81%), Positives = 401/429 (93%)
 Frame = +3

Query: 3    AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYL 182
            AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV+RFYD IEVG+VYL
Sbjct: 238  AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVERFYDVIEVGRVYL 297

Query: 183  ISKGSLKPAQKNFNHLKNEWEVFLELNSMIELCPDEDGSIPQQQFSFRPISDIENVDSNS 362
            ISKGSLKPAQ+NFNHLKNEWE+FLE  S ++LCPD D SIP+QQF+F+ IS+IENV++NS
Sbjct: 298  ISKGSLKPAQRNFNHLKNEWEIFLEATSTVDLCPDGDNSIPKQQFTFKTISEIENVENNS 357

Query: 363  IVDVIGVVTSVNPSVPILRKNGMETQRRILNLKDSSGRSIELTLWGDFCNREGQKLQEMV 542
            I+DVIG+V SVNPSVPILRKNGMETQRRILNLKD SGR+IELTLWGDFCN+EGQ+LQE+V
Sbjct: 358  ILDVIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELTLWGDFCNKEGQQLQEIV 417

Query: 543  DAGFFPILAVKSGKVNDFSGKTIGSISTTQLFINPDFPEAHSLRDWFDRVGKDSASLSIS 722
            D+G FP+LAVK+GKV+DFSGK++G+IS+TQLFINPD PEAH L+DWFDR G+ +AS+SIS
Sbjct: 418  DSGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVSIS 477

Query: 723  KDINPGGAKNEIRKTVSQIKDEGLGRSDKPDWVTMRATISFIKTDTFCYTACPLMIGDRQ 902
            +DI PGG+KNEIRKTVSQIK EGLGRSD+PDWVT+ A I+F+KTDTFCYTACPLMIGDRQ
Sbjct: 478  RDILPGGSKNEIRKTVSQIKHEGLGRSDRPDWVTVSARITFVKTDTFCYTACPLMIGDRQ 537

Query: 903  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQILDHTGLTWVTAFQEAGEEIMGYPAK 1082
            CNKKVT SG++RWQCDRCNQEF+ECDYRYLLQ QI DHTGLTWVTAFQE+GEEI+G PAK
Sbjct: 538  CNKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPAK 597

Query: 1083 ELYMLKYEQEDDERFGDIIKSRLFNQFVFRLKIKEELYGDEQKVKITVVKADKVNYSSES 1262
            ELY LKYE +DD +F D+I+SRLF QF+FRLKIKEE+YGDEQ+VKITVVKA+KVNYSSE 
Sbjct: 598  ELYQLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSEG 657

Query: 1263 RYMLDLISK 1289
            RY+LDLIS+
Sbjct: 658  RYLLDLISQ 666


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 623

 Score =  740 bits (1910), Expect = 0.0
 Identities = 345/432 (79%), Positives = 407/432 (94%)
 Frame = +3

Query: 3    AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYL 182
            AIKARVTAKGDLRRYNNA+GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY+ IEVGKVYL
Sbjct: 192  AIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYL 251

Query: 183  ISKGSLKPAQKNFNHLKNEWEVFLELNSMIELCPDEDGSIPQQQFSFRPISDIENVDSNS 362
            ISKGSLKPA+K+FNHLKNEWEVFLE +S +ELCPDED +IP+QQFSF+PIS+IEN ++NS
Sbjct: 252  ISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKPISEIENAETNS 311

Query: 363  IVDVIGVVTSVNPSVPILRKNGMETQRRILNLKDSSGRSIELTLWGDFCNREGQKLQEMV 542
            I+DVIG+VTS+NPS+P+LRKNGMETQRR++ LKD+SGRS+ELT+WGDFCN+EGQKLQE++
Sbjct: 312  ILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQEII 371

Query: 543  DAGFFPILAVKSGKVNDFSGKTIGSISTTQLFINPDFPEAHSLRDWFDRVGKDSASLSIS 722
             +G  P+LAVKSGKV+DF+GK+IG+IS+TQLFINPD PEAH LR+W+D  GK++ SLSIS
Sbjct: 372  YSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSLSIS 431

Query: 723  KDINPGGAKNEIRKTVSQIKDEGLGRSDKPDWVTMRATISFIKTDTFCYTACPLMIGDRQ 902
            K+I PG AKN+IRKTVSQIKDEGLGR+DKPDW+T++ATISFIKTD+FCYTACPLMIGDRQ
Sbjct: 432  KEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQ 491

Query: 903  CNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQILDHTGLTWVTAFQEAGEEIMGYPAK 1082
            CNKKVTRSG+++W CDRCNQEFE+CDYRYLLQAQI DHTGLTWVTAFQE GEEI+G   K
Sbjct: 492  CNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSGK 551

Query: 1083 ELYMLKYEQEDDERFGDIIKSRLFNQFVFRLKIKEELYGDEQKVKITVVKADKVNYSSES 1262
            ELYMLKYE++DD +FG+II+S++F+QF+FRLKIKEE+YGDEQ+VK TVVKAD+VNYSSES
Sbjct: 552  ELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSES 611

Query: 1263 RYMLDLISKFCR 1298
            +YMLDL+SKF R
Sbjct: 612  KYMLDLLSKFSR 623


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