BLASTX nr result

ID: Glycyrrhiza24_contig00010254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010254
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47666.1| unknown [Medicago truncatula]                          120   7e-25
ref|XP_003539542.1| PREDICTED: uncharacterized protein LOC100779...   118   3e-24
ref|XP_003541897.1| PREDICTED: uncharacterized protein LOC100798...   110   7e-22
ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206...    92   2e-16
gb|ABK94808.1| unknown [Populus trichocarpa]                           88   5e-15

>gb|AFK47666.1| unknown [Medicago truncatula]
          Length = 188

 Score =  120 bits (301), Expect = 7e-25
 Identities = 78/178 (43%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
 Frame = +3

Query: 81  MAKNNKYTAINFNHIYE-KTITSNTTNHPSKNPXXXXXXXXXXXXXXXXXXPNKHGRILV 257
           MAKNNKY +INFNHIY+ K IT+  TN+ SKNP                  PNKHGRILV
Sbjct: 1   MAKNNKYASINFNHIYDNKPITTTKTNNASKNPSLSSSSSFSSASYSAVSAPNKHGRILV 60

Query: 258 LTRXXXXXXXXXXXXXXXXXXXXXIQHLP---DRPRSEPGPDSIXXXXXXXXXXXXXXXX 428
           LTR                         P   DRPRS+PGPDSI                
Sbjct: 61  LTRPTPKPISHPTPPAQSQQSKPNPIQAPVSSDRPRSQPGPDSISLRPLGRTGSLSSGLL 120

Query: 429 XXXVLNHDKDKDLPSPQQSPKPDKFLPPHLRPGFVPREERFGPEPGRARDNGRPKSGG 602
              VLN +K+K LP      K  KF+PPHLRPGFVPREE         R+N RPKSGG
Sbjct: 121 PNPVLNGEKEKSLPV-----KSGKFVPPHLRPGFVPREECL-------RENLRPKSGG 166


>ref|XP_003539542.1| PREDICTED: uncharacterized protein LOC100779201 [Glycine max]
          Length = 286

 Score =  118 bits (296), Expect = 3e-24
 Identities = 94/223 (42%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
 Frame = +2

Query: 230 P*QT-WPYPRSNPTHSQTRHASRPITTTNPTQPSHPAPPRSAPLRTGTRLDLASPSGPNR 406
           P QT WP+PR NPTHSQT HA  P T T  T  + P P +  P+RT    DLA   GPNR
Sbjct: 38  PQQTPWPHPRPNPTHSQTHHALHPATATATTTTADPDPAQPPPVRTRIGRDLAPTPGPNR 97

Query: 407 TRAVSLFAAPGSQPRQRQGLAFPAAVSQTGQVXXXXXXXWVRAERGA--VRT*TGSGKG* 580
            R  +L A    QPRQ   LA  +A +Q GQV        VR++ G    R  T +    
Sbjct: 98  NRFTALVAPRCFQPRQGLALALSSA-AQDGQVRTATPSARVRSQGGGSPARARTSAQ--- 153

Query: 581 RATQVWWL-RQDEEGFR------VGYGS*QSTEFEWMMMNG*I---LFRGRR*THFCHRD 730
           R  QV W   QDE+G+        G G   S +F+W  MNG      F      H   + 
Sbjct: 154 RPAQVGWRPGQDEKGWAGWRLGCGGLGPRDSAQFQW--MNGGYEVEFFSEDEDKHILLQR 211

Query: 731 GFSVPIHCNVSFVLLELTSIFTRWHLKSLKTKLDQVADSQHLT 859
                   +VSFV LELTSIFT W  KS K K DQVAD  HLT
Sbjct: 212 WVLYTNSVHVSFVPLELTSIFT-WQKKSQKMKTDQVADFHHLT 253


>ref|XP_003541897.1| PREDICTED: uncharacterized protein LOC100798711 [Glycine max]
          Length = 218

 Score =  110 bits (275), Expect = 7e-22
 Identities = 78/196 (39%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
 Frame = +2

Query: 242 WPYPRSNPTHSQTRHASRPITTTNPTQPSHPAPPRSAPLRTGTRLDLASPSGPNRTRAVS 421
           WP+P  NPTH+QTRHA  P T T   +P    PP   P+RTG   DLA   GPNR R  +
Sbjct: 27  WPHPCPNPTHTQTRHAPHPATATTTAEPDPAQPP---PVRTGIGCDLAPTPGPNRNRFTA 83

Query: 422 LFAAPGS-QPRQRQGLAFPAAVSQTGQVXXXXXXXWVRAERGAVRT*TGSGKG*RATQVW 598
           L   P   QPRQ   LA  +A ++  QV        VRAERG       +     A   W
Sbjct: 84  LVGCPRCFQPRQGLALALSSA-TEDEQVRAAAPSARVRAERGGPPARARTSAQREAQVRW 142

Query: 599 WLRQDEE---GFRVGYGS---*QSTEFEWMMMNG*ILFRGRR*THFCHRDGFSVPIHCNV 760
              QDE+   G+RVG+G+    +S +F+WM       F      H   +         + 
Sbjct: 143 RAVQDEKGWSGWRVGFGALGPRESAQFQWMNGYEVEFFSEDEDKHILLQRLVLNTNSVHA 202

Query: 761 SFVLLELTSIFTRWHL 808
           SFV LELTSIFTRWHL
Sbjct: 203 SFVPLELTSIFTRWHL 218


>ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206223 [Cucumis sativus]
           gi|449508868|ref|XP_004163431.1| PREDICTED:
           uncharacterized protein LOC101231399 [Cucumis sativus]
          Length = 229

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 72/200 (36%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
 Frame = +3

Query: 81  MAKNNKYTAINFNHIYEKTITSN--TTNHPS--KNPXXXXXXXXXXXXXXXXXXPNK-HG 245
           MAK NKYT+INFNHIY+K ++SN  T N+PS  KNP                  PNK HG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 246 RILVLTRXXXXXXXXXXXXXXXXXXXXXI---QHLPDRPRSEPGPDSIXXXXXXXXXXXX 416
           R+LVLTR                         + +PD PR +   DSI            
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 417 XXXXXXXVLNHDKDKDLPSPQQS-PKPDKFLPPHLRPGFVPREER--------------- 548
                  VL  +KD+++  P  +  KP+KF+PPHLR GFV +EER               
Sbjct: 121 IAPSPIPVL--EKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQ 178

Query: 549 FG--PEPGRARDNGRPKSGG 602
           +G     GR  ++GRPKSGG
Sbjct: 179 YGNYGSSGRYGEDGRPKSGG 198


>gb|ABK94808.1| unknown [Populus trichocarpa]
          Length = 238

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 66/212 (31%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
 Frame = +3

Query: 81  MAKNNKYTAINFNHIYEKTITSNTT-NHPSKNPXXXXXXXXXXXXXXXXXXPNK------ 239
           MA+ NKY ++NFNH+ +K I+++T+ N+ + NP                  PN       
Sbjct: 1   MARANKYASVNFNHVCDKNISNSTSSNNTNNNPSKHQSSTSFYSTISSPNSPNNLYKSHL 60

Query: 240 -------HGRILVLTRXXXXXXXXXXXXXXXXXXXXXIQH-----LPDRPRSEPGPDSIX 383
                  HGR+LVLTR                       H     +P +  +EP  D I 
Sbjct: 61  PSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRIS 120

Query: 384 XXXXXXXXXXXXXXXXXXVLNHDKDKDLPSPQQSPKPDKFLPPHLRPGFVPREERFGPE- 560
                             V   +K K++ S   SPK DKF+PPHLRPGFV REE+ GPE 
Sbjct: 121 LRPLGRTGAGSIASSP--VHGQEKQKEVGSSVGSPKSDKFVPPHLRPGFVGREEKPGPEV 178

Query: 561 -----------------PGRARDNGRPKSGGY 605
                            P R  + GRPKSGGY
Sbjct: 179 FRGKEVGQRQQQQFFGSPDRFGEEGRPKSGGY 210


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