BLASTX nr result

ID: Glycyrrhiza24_contig00010246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010246
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   205   8e-51
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   205   8e-51
ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   202   4e-50
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   196   5e-48
ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like...   192   6e-47

>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  205 bits (521), Expect = 8e-51
 Identities = 108/126 (85%), Positives = 111/126 (88%)
 Frame = -1

Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485

Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320
               TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+AMENVLPAKYEEAREEEKLRSQRED
Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545

Query: 319 FSDMVA 302
           FSDMVA
Sbjct: 546 FSDMVA 551


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  205 bits (521), Expect = 8e-51
 Identities = 108/126 (85%), Positives = 111/126 (88%)
 Frame = -1

Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485

Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320
               TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+AMENVLPAKYEEAREEEKLRSQRED
Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545

Query: 319 FSDMVA 302
           FSDMVA
Sbjct: 546 FSDMVA 551


>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  202 bits (515), Expect = 4e-50
 Identities = 107/126 (84%), Positives = 110/126 (87%)
 Frame = -1

Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPE+PLYQVLEEKEEKIAP           
Sbjct: 427 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKIAPGTLLGTTHTYV 486

Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320
               TQDKSGAKRVDLL+GQKSDKVDVTL PEELDAMENVLPAKYEEAREEEKLR+QRED
Sbjct: 487 VNTGTQDKSGAKRVDLLRGQKSDKVDVTLLPEELDAMENVLPAKYEEAREEEKLRNQRED 546

Query: 319 FSDMVA 302
           FSDMVA
Sbjct: 547 FSDMVA 552


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  196 bits (497), Expect = 5e-48
 Identities = 101/125 (80%), Positives = 109/125 (87%)
 Frame = -1

Query: 676 GIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXXX 497
           GI+SVDS SSTPTGVETPDVIDLRKQQRKEP+RPLYQVLEEKEE++AP            
Sbjct: 432 GIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPGTLLGTSHTYVI 491

Query: 496 XXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQREDF 317
              TQDK+GAKRVDLL+GQKSDKVDVTL+PEEL+AMENVLPAKYEEAREEEKLRSQREDF
Sbjct: 492 SGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDF 551

Query: 316 SDMVA 302
           SDMVA
Sbjct: 552 SDMVA 556


>ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like, partial [Vitis
           vinifera]
          Length = 279

 Score =  192 bits (488), Expect = 6e-47
 Identities = 101/126 (80%), Positives = 107/126 (84%)
 Frame = -1

Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 130 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 189

Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320
               TQDK+ AKRVDLL+GQK+DKVDVTLQPEEL+ +ENV+ AKYEEAREEEK RSQRED
Sbjct: 190 VNTGTQDKTAAKRVDLLRGQKTDKVDVTLQPEELEVLENVVAAKYEEAREEEKQRSQRED 249

Query: 319 FSDMVA 302
           FSDMVA
Sbjct: 250 FSDMVA 255


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