BLASTX nr result
ID: Glycyrrhiza24_contig00010246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00010246 (709 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like... 205 8e-51 ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like... 205 8e-51 ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like... 202 4e-50 ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like... 196 5e-48 ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like... 192 6e-47 >ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 205 bits (521), Expect = 8e-51 Identities = 108/126 (85%), Positives = 111/126 (88%) Frame = -1 Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485 Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320 TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+AMENVLPAKYEEAREEEKLRSQRED Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545 Query: 319 FSDMVA 302 FSDMVA Sbjct: 546 FSDMVA 551 >ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 205 bits (521), Expect = 8e-51 Identities = 108/126 (85%), Positives = 111/126 (88%) Frame = -1 Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485 Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320 TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+AMENVLPAKYEEAREEEKLRSQRED Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545 Query: 319 FSDMVA 302 FSDMVA Sbjct: 546 FSDMVA 551 >ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 577 Score = 202 bits (515), Expect = 4e-50 Identities = 107/126 (84%), Positives = 110/126 (87%) Frame = -1 Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPE+PLYQVLEEKEEKIAP Sbjct: 427 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKIAPGTLLGTTHTYV 486 Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320 TQDKSGAKRVDLL+GQKSDKVDVTL PEELDAMENVLPAKYEEAREEEKLR+QRED Sbjct: 487 VNTGTQDKSGAKRVDLLRGQKSDKVDVTLLPEELDAMENVLPAKYEEAREEEKLRNQRED 546 Query: 319 FSDMVA 302 FSDMVA Sbjct: 547 FSDMVA 552 >ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] gi|449515207|ref|XP_004164641.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] Length = 580 Score = 196 bits (497), Expect = 5e-48 Identities = 101/125 (80%), Positives = 109/125 (87%) Frame = -1 Query: 676 GIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXXX 497 GI+SVDS SSTPTGVETPDVIDLRKQQRKEP+RPLYQVLEEKEE++AP Sbjct: 432 GIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPGTLLGTSHTYVI 491 Query: 496 XXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQREDF 317 TQDK+GAKRVDLL+GQKSDKVDVTL+PEEL+AMENVLPAKYEEAREEEKLRSQREDF Sbjct: 492 SGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDF 551 Query: 316 SDMVA 302 SDMVA Sbjct: 552 SDMVA 556 >ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like, partial [Vitis vinifera] Length = 279 Score = 192 bits (488), Expect = 6e-47 Identities = 101/126 (80%), Positives = 107/126 (84%) Frame = -1 Query: 679 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 500 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 130 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 189 Query: 499 XXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELDAMENVLPAKYEEAREEEKLRSQRED 320 TQDK+ AKRVDLL+GQK+DKVDVTLQPEEL+ +ENV+ AKYEEAREEEK RSQRED Sbjct: 190 VNTGTQDKTAAKRVDLLRGQKTDKVDVTLQPEELEVLENVVAAKYEEAREEEKQRSQRED 249 Query: 319 FSDMVA 302 FSDMVA Sbjct: 250 FSDMVA 255