BLASTX nr result

ID: Glycyrrhiza24_contig00010206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010206
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604012.1| 30S ribosomal protein S31 [Medicago truncatu...    87   2e-15
gb|AFK48712.1| unknown [Medicago truncatula]                           85   1e-14
gb|AFK48685.1| unknown [Lotus japonicus]                               71   2e-10
ref|XP_002268532.1| PREDICTED: 30S ribosomal protein S31, mitoch...    70   3e-10
emb|CAN75923.1| hypothetical protein VITISV_029514 [Vitis vinifera]    70   3e-10

>ref|XP_003604012.1| 30S ribosomal protein S31 [Medicago truncatula]
           gi|355493060|gb|AES74263.1| 30S ribosomal protein S31
           [Medicago truncatula]
          Length = 91

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 49/87 (56%), Positives = 56/87 (64%)
 Frame = +2

Query: 59  MASGVSVNVMQRCSSVAARWLTRGPPSSSMAAAECGGVAGPILCXXXXXXXXXXXXXXXS 238
           MASG   +VM+RC+ VAARWL RG  S+    A   GV GPI+C               S
Sbjct: 1   MASG-GASVMKRCT-VAARWLIRGA-STETPCASSAGVTGPIVCGRGDKKTKKGKRFKGS 57

Query: 239 YGKARPKSEKMIERIKDKVEVPRSTPW 319
           YGK+RPK E+MIERIKDKVEVPRSTPW
Sbjct: 58  YGKSRPKREQMIERIKDKVEVPRSTPW 84


>gb|AFK48712.1| unknown [Medicago truncatula]
          Length = 91

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 48/87 (55%), Positives = 55/87 (63%)
 Frame = +2

Query: 59  MASGVSVNVMQRCSSVAARWLTRGPPSSSMAAAECGGVAGPILCXXXXXXXXXXXXXXXS 238
           MASG   +VM+RC+ VAARW  RG  S+    A   GV GPI+C               S
Sbjct: 1   MASG-GASVMKRCT-VAARWSIRGA-STETPCASSAGVTGPIVCGRGDKKTKKGKRFKGS 57

Query: 239 YGKARPKSEKMIERIKDKVEVPRSTPW 319
           YGK+RPK E+MIERIKDKVEVPRSTPW
Sbjct: 58  YGKSRPKREQMIERIKDKVEVPRSTPW 84


>gb|AFK48685.1| unknown [Lotus japonicus]
          Length = 81

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/87 (50%), Positives = 47/87 (54%)
 Frame = +2

Query: 59  MASGVSVNVMQRCSSVAARWLTRGPPSSSMAAAECGGVAGPILCXXXXXXXXXXXXXXXS 238
           MASG +   MQRC  VAARWL R   +           A PILC               S
Sbjct: 1   MASGATA--MQRCG-VAARWLMRPAVTE----------ASPILCGRGDKRTEKGKRFKGS 47

Query: 239 YGKARPKSEKMIERIKDKVEVPRSTPW 319
           YG +RPK EKMIERIKDK EVPRSTPW
Sbjct: 48  YGNSRPKKEKMIERIKDKNEVPRSTPW 74


>ref|XP_002268532.1| PREDICTED: 30S ribosomal protein S31, mitochondrial [Vitis
           vinifera]
          Length = 88

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = +2

Query: 83  VMQRCSSVAARWLTRGPPSSSMAAAECGGVAGPILCXXXXXXXXXXXXXXXSYGKARPKS 262
           +MQ C + A R +T     S++A++    +  PILC               SYG ARPK 
Sbjct: 3   MMQWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKK 62

Query: 263 EKMIERIKDKVEVPRSTPW 319
           EK IERIKDKVEVPRS PW
Sbjct: 63  EKKIERIKDKVEVPRSIPW 81


>emb|CAN75923.1| hypothetical protein VITISV_029514 [Vitis vinifera]
          Length = 88

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = +2

Query: 83  VMQRCSSVAARWLTRGPPSSSMAAAECGGVAGPILCXXXXXXXXXXXXXXXSYGKARPKS 262
           +MQ C + A R +T     S++A++    +  PILC               SYG ARPK 
Sbjct: 3   MMQWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKK 62

Query: 263 EKMIERIKDKVEVPRSTPW 319
           EK IERIKDKVEVPRS PW
Sbjct: 63  EKKIERIKDKVEVPRSXPW 81


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