BLASTX nr result

ID: Glycyrrhiza24_contig00010198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010198
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-...   133   5e-41
gb|AFK45895.1| unknown [Medicago truncatula]                          125   7e-39
ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-...   122   3e-35
ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-35
ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-...   126   7e-35

>ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
          Length = 238

 Score =  133 bits (334), Expect(2) = 5e-41
 Identities = 67/117 (57%), Positives = 83/117 (70%), Gaps = 5/117 (4%)
 Frame = +1

Query: 7   TPANPTRAVISVVDHELPFDTHNRYDVAFDS-ETIDTLLTSSPTHLDTWLTETLQ----L 171
           T   P  A ISVVDH LP+DTHN YDV+F++  TI TLLTS P+ +D+W++  L+     
Sbjct: 18  TTTTPVVAPISVVDHGLPYDTHNLYDVSFNNTHTIYTLLTSDPSLVDSWISTVLRDHQHQ 77

Query: 172 HNPHPFVVGLDIEWRPNFQRNSDNPVATLQLCINRRCIVFQIIHSPYLPRSLHTFLS 342
           H      VGLDIEWRPN QRN  NPVATLQLC+  RC+VFQI+HSP +P SL +FL+
Sbjct: 78  HQQRVLTVGLDIEWRPNTQRNMQNPVATLQLCVAERCLVFQILHSPSIPPSLVSFLA 134



 Score = 60.1 bits (144), Expect(2) = 5e-41
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +3

Query: 411 SLHTFLSDPNHTFVGVGIDADVEKLLVDYNLSVANAVDLRS 533
           SL +FL+DPN TFVGVGI  D+EKLL DYNL+VAN  DLRS
Sbjct: 128 SLVSFLADPNITFVGVGIQEDMEKLLEDYNLNVANVRDLRS 168


>gb|AFK45895.1| unknown [Medicago truncatula]
          Length = 236

 Score =  125 bits (313), Expect(2) = 7e-39
 Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   TPTPANPTRAVISVVDHELPFDTHNRYDVAFDSE-TIDTLLTSSPTHLDTWLTETLQLHN 177
           TP+P N     I++ D+ LP+DTHN Y +  D+  TI TLLT SP H+++WL ET  L  
Sbjct: 23  TPSPFN-----ITLFDNHLPYDTHNTYSITIDTTLTIQTLLTCSPIHVESWLLETQSLS- 76

Query: 178 PHPFVVGLDIEWRPNFQRNSDNPVATLQLCINRRCIVFQIIHSPYLPRSLHTFLS 342
             P ++GLDIEWRPN QR   NP ATLQL  N RC++FQ+IHSP +P  L TFLS
Sbjct: 77  --PAIIGLDIEWRPNSQRGQSNPAATLQLYTNNRCLIFQLIHSPSIPTFLFTFLS 129



 Score = 60.8 bits (146), Expect(2) = 7e-39
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = +3

Query: 414 LHTFLSDPNHTFVGVGIDADVEKLLVDYNLSVANAVDLRS 533
           L TFLS+PN+ FVGVGI++D+EK++ DYNL+VAN VDLR+
Sbjct: 124 LFTFLSNPNNRFVGVGIESDIEKIIEDYNLTVANYVDLRN 163


>ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506025|ref|XP_004162631.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 210

 Score =  122 bits (307), Expect(2) = 3e-35
 Identities = 53/106 (50%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +1

Query: 28  AVISVVDHELPFDTHNRYDVAFDSETIDTLLTSSPTHLDTWLTETLQLHNP--HPFVVGL 201
           A +++ D ++P ++H+ YD+ FD + I TL+T+SP+ +D W++E L++H    H  VVGL
Sbjct: 2   ATLTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGL 61

Query: 202 DIEWRPNFQRNSDNPVATLQLCINRRCIVFQIIHSPYLPRSLHTFL 339
           D+EWRPNF R+  NPVATLQLC+ RRC++FQ+IH+   P+SL  FL
Sbjct: 62  DVEWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHASETPQSLIDFL 107



 Score = 51.2 bits (121), Expect(2) = 3e-35
 Identities = 27/40 (67%), Positives = 29/40 (72%)
 Frame = +3

Query: 411 SLHTFLSDPNHTFVGVGIDADVEKLLVDYNLSVANAVDLR 530
           SL  FL D   TFVGVGID DV KL  DY+L+VAN VDLR
Sbjct: 102 SLIDFLEDDTFTFVGVGIDNDVLKLYNDYDLNVANTVDLR 141


>ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|222854828|gb|EEE92375.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  117 bits (294), Expect(2) = 3e-35
 Identities = 59/110 (53%), Positives = 80/110 (72%), Gaps = 7/110 (6%)
 Frame = +1

Query: 34  ISVVDHELPFDTHNRYDVAFDSETIDTLLTSSPTHLDTWLTETLQ-LH---NP--HPFVV 195
           IS+ DH+LP++THN YDV F  + I TL+T +P+ ++TW+ ET Q LH   NP  HP +V
Sbjct: 3   ISIEDHQLPYNTHNLYDVNFFDDKIHTLVTHTPSFVNTWIAETQQKLHQNNNPADHPLLV 62

Query: 196 GLDIEWRPNFQRNSDNPVATLQLCINRRCIVFQIIHSPY-LPRSLHTFLS 342
           GLDIEWRPN  R  +NPVATLQL   + C++FQ++H P  +P+SL+ FLS
Sbjct: 63  GLDIEWRPNRTRQIENPVATLQLSTGKDCLIFQLLHCPTGIPQSLYDFLS 112



 Score = 55.8 bits (133), Expect(2) = 3e-35
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +3

Query: 411 SLHTFLSDPNHTFVGVGIDADVEKLLVDYNLSVANAVDLR 530
           SL+ FLS+ N+TFVGVGI+ DVEKL+  Y++S+ NAVDLR
Sbjct: 106 SLYDFLSNKNYTFVGVGIEGDVEKLVEGYDVSMGNAVDLR 145


>ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506001|ref|XP_004162625.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 209

 Score =  126 bits (316), Expect(2) = 7e-35
 Identities = 59/103 (57%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +1

Query: 34  ISVVDHELPFDTHNRYDVAFDS-ETIDTLLTSSPTHLDTWLTETLQLHNPHPFVVGLDIE 210
           I++VDHE+P D+HN +D+ FD+ E I TLLT+SP+ +D W+++TL +  P P +VGLDIE
Sbjct: 3   ITIVDHEVPSDSHNYFDITFDTDEPILTLLTTSPSMVDGWISQTLAIQTP-PLLVGLDIE 61

Query: 211 WRPNFQRNSDNPVATLQLCINRRCIVFQIIHSPYLPRSLHTFL 339
           WRPN  R+ DNPVATLQLCI RRC++ Q++H P +P+SL  FL
Sbjct: 62  WRPN-NRSYDNPVATLQLCIGRRCLILQLLHMPEIPKSLFEFL 103



 Score = 46.2 bits (108), Expect(2) = 7e-35
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 411 SLHTFLSDPNHTFVGVGIDADVEKLLVDYNLSVANAVDLR 530
           SL  FL + + TFVGVGID D EKL  DY L V   +DLR
Sbjct: 98  SLFEFLENESFTFVGVGIDEDAEKLNCDYGLKVGKRMDLR 137


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