BLASTX nr result

ID: Glycyrrhiza24_contig00010185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010185
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538574.1| PREDICTED: small heat shock protein, chlorop...   131   8e-29
gb|ACU20181.1| unknown [Glycine max]                                  131   8e-29
ref|XP_003601844.1| Chloroplast small heat shock protein [Medica...   125   6e-27
ref|XP_002314566.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chlo...    90   3e-16

>ref|XP_003538574.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 235

 Score =  131 bits (330), Expect = 8e-29
 Identities = 65/88 (73%), Positives = 73/88 (82%), Gaps = 3/88 (3%)
 Frame = -1

Query: 255 RPTHLKPLRAMAGDHAREKLDPVS--SHNKH-QPQPKRRVAPASPIGLWDRFPTARTVQE 85
           RPT +KP++ M GD AREKL+ V    HNKH QP PK +VAP  P+GLWDRFPTARTVQE
Sbjct: 23  RPTQVKPMKVMMGD-AREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQE 81

Query: 84  MMETMERIMEDPFAMSTMEWPSSPLPSE 1
           MMETMER+MEDPFA ST+EWPSSPLPSE
Sbjct: 82  MMETMERMMEDPFAFSTLEWPSSPLPSE 109


>gb|ACU20181.1| unknown [Glycine max]
          Length = 235

 Score =  131 bits (330), Expect = 8e-29
 Identities = 65/88 (73%), Positives = 73/88 (82%), Gaps = 3/88 (3%)
 Frame = -1

Query: 255 RPTHLKPLRAMAGDHAREKLDPVS--SHNKH-QPQPKRRVAPASPIGLWDRFPTARTVQE 85
           RPT +KP++ M GD AREKL+ V    HNKH QP PK +VAP  P+GLWDRFPTARTVQE
Sbjct: 23  RPTQVKPMKVMMGD-AREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQE 81

Query: 84  MMETMERIMEDPFAMSTMEWPSSPLPSE 1
           MMETMER+MEDPFA ST+EWPSSPLPSE
Sbjct: 82  MMETMERMMEDPFAFSTLEWPSSPLPSE 109


>ref|XP_003601844.1| Chloroplast small heat shock protein [Medicago truncatula]
           gi|355490892|gb|AES72095.1| Chloroplast small heat shock
           protein [Medicago truncatula]
          Length = 221

 Score =  125 bits (314), Expect = 6e-27
 Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
 Frame = -1

Query: 261 IPRPTHLKPLRAMAGDHAREKLDPVSSHNK---HQPQPKRRVAPASPIGLWDRFPTARTV 91
           + R TH   +RAM G+ AREKLD VS  N    HQ QPK+RV PA+PIGLWDRFPT RTV
Sbjct: 20  LSRQTHFFRVRAMTGE-AREKLDHVSRSNNIKHHQSQPKKRVFPAAPIGLWDRFPTTRTV 78

Query: 90  QEMMETMERIMEDPFAMSTMEWPSSPLPSE 1
           QEMMETME +MEDPFAMST+EWPSSPLP E
Sbjct: 79  QEMMETMESMMEDPFAMSTIEWPSSPLPIE 108


>ref|XP_002314566.1| predicted protein [Populus trichocarpa] gi|222863606|gb|EEF00737.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 48/72 (66%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
 Frame = -1

Query: 210 AREKLDPV--SSHNKHQPQPKRRVAPASPIGLWDRFPTARTVQEMMETMERIMEDPFAMS 37
           +RE LD +  +  N  Q Q K+RVAPA+PIGLWDRFPTARTVQ+MMETMER+MEDPF  S
Sbjct: 5   SRENLDHLQRARKNPQQSQHKKRVAPAAPIGLWDRFPTARTVQQMMETMERVMEDPFVYS 64

Query: 36  TMEWPSSPLPSE 1
              WP SPLP E
Sbjct: 65  G-RWP-SPLPVE 74


>ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus] gi|449512976|ref|XP_004164194.1| PREDICTED:
           25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
 Frame = -1

Query: 234 LRAMAGDHAREKLDPVSSHNKHQPQ----PKRRVAPASPIGLWDRFPTARTVQEMMETME 67
           ++A+ GD  RE LD +    + + Q    PK+RVAP +PIGLWDRFPTARTVQ+MMETME
Sbjct: 32  VKAVRGD-GRENLDHLQRTIEKEKQTAQPPKKRVAPVAPIGLWDRFPTARTVQQMMETME 90

Query: 66  RIMEDPFAMSTMEWPSSPLPSE 1
           RIM+DPFA S   WPS P  S+
Sbjct: 91  RIMDDPFAYSG-AWPSPPFTSD 111