BLASTX nr result

ID: Glycyrrhiza24_contig00010132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010132
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46841.1| unknown [Lotus japonicus]                              274   3e-71
ref|XP_003526409.1| PREDICTED: ethylene-responsive transcription...   254   2e-65
ref|XP_003603408.1| Ethylene-responsive transcription factor SHI...   253   5e-65
ref|XP_003522617.1| PREDICTED: ethylene-responsive transcription...   247   4e-63
ref|XP_003549279.1| PREDICTED: ethylene-responsive transcription...   242   1e-61

>gb|AFK46841.1| unknown [Lotus japonicus]
          Length = 208

 Score =  274 bits (700), Expect = 3e-71
 Identities = 150/212 (70%), Positives = 157/212 (74%), Gaps = 5/212 (2%)
 Frame = -2

Query: 831 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXAILMNGQNAKT 652
           MVQ+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET           AILMNGQNAKT
Sbjct: 1   MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYNQAAILMNGQNAKT 60

Query: 651 NFPVSKNNQAEDATNATPCGDDPFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDADNSH 472
           NFP S+N   + AT+   C DD FLSPKALSELLSTKLRKYCKDPSPS+TCLRLDADNSH
Sbjct: 61  NFPNSRNQAGDAATSN--CDDDSFLSPKALSELLSTKLRKYCKDPSPSVTCLRLDADNSH 118

Query: 471 IGVWQKGAGPHSDSSWVMRVELGKKQTE-----TGSPXXXXXXXXXXXXXXXXDRVALQM 307
           IGVWQKGAGPHS+S+WVMRVELGKKQ E     TGSP                DRVALQM
Sbjct: 119 IGVWQKGAGPHSNSNWVMRVELGKKQNEGHSVSTGSP--QHVCSNAAKRVEEEDRVALQM 176

Query: 306 IEELLNWNYPCGXXXXXXXXXQEEKKNLPTCH 211
           IEELLNWNYPC          QEEK NLP CH
Sbjct: 177 IEELLNWNYPCA-SSTSSNSQQEEKLNLP-CH 206


>ref|XP_003526409.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Glycine max]
          Length = 185

 Score =  254 bits (649), Expect = 2e-65
 Identities = 137/189 (72%), Positives = 141/189 (74%), Gaps = 6/189 (3%)
 Frame = -2

Query: 831 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXAILMNGQNAKT 652
           MVQ+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET           AILMNGQNAKT
Sbjct: 1   MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT 60

Query: 651 NFPVSKNNQAEDATNATPCGDDPFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDADNSH 472
           NFP SKN    D  N T    D FLSPKALSELLSTKLRKYCKDP+PSLTCLRLDADNSH
Sbjct: 61  NFPTSKNQAEADDNNNT----DTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSH 116

Query: 471 IGVWQKGAGPHSDSSWVMRVELGKKQ-TETG-----SPXXXXXXXXXXXXXXXXDRVALQ 310
           IGVWQKGAGPHS S+WVMR+ELGKKQ TE G     SP                DRVALQ
Sbjct: 117 IGVWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNGATENNEVEEEDRVALQ 176

Query: 309 MIEELLNWN 283
           MIEELLNWN
Sbjct: 177 MIEELLNWN 185


>ref|XP_003603408.1| Ethylene-responsive transcription factor SHINE [Medicago
           truncatula] gi|355492456|gb|AES73659.1|
           Ethylene-responsive transcription factor SHINE [Medicago
           truncatula]
          Length = 208

 Score =  253 bits (646), Expect = 5e-65
 Identities = 139/201 (69%), Positives = 147/201 (73%), Gaps = 16/201 (7%)
 Frame = -2

Query: 825 QSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXAILMNGQNAKTNF 646
           Q+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET           AILMNGQ+AKTNF
Sbjct: 4   QTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQSAKTNF 63

Query: 645 PVSKNNQAEDATNATPC----GDDPFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDADN 478
           PV+KN Q E+  + TP     GDD FLSPKALSELLSTKLRKYCKDPSPSLTCLRLD DN
Sbjct: 64  PVTKN-QGEEVASDTPYNGGGGDDSFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDNDN 122

Query: 477 SHIGVWQKGAGPHSDSSWVMRVEL-GKKQT----ETGSP-------XXXXXXXXXXXXXX 334
           SHIGVWQK AGPHSDS+WVMRVEL GKK+T    E GS                      
Sbjct: 123 SHIGVWQKRAGPHSDSNWVMRVELGGKKKTIESEEIGSKQHTIDGGNNSNADNENRVVVE 182

Query: 333 XXDRVALQMIEELLNWNYPCG 271
             +RVALQMIEELLNWNYPCG
Sbjct: 183 EEERVALQMIEELLNWNYPCG 203


>ref|XP_003522617.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Glycine max]
          Length = 192

 Score =  247 bits (630), Expect = 4e-63
 Identities = 135/197 (68%), Positives = 140/197 (71%), Gaps = 14/197 (7%)
 Frame = -2

Query: 831 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXAILMNGQNAKT 652
           MVQ+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET           AILMNGQNAKT
Sbjct: 1   MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT 60

Query: 651 NFPVSKNNQAEDATNATPCGDDPFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDADNSH 472
           NFP SKN    D  N     ++ FLSPKALSELLSTKLRKYCKDP+PSLTCLRLDADNSH
Sbjct: 61  NFPTSKNQAEADHDN-----NNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSH 115

Query: 471 IGVWQKGAGPHSDSSWVMRVELGKKQ-----TETGSP---------XXXXXXXXXXXXXX 334
           IGVWQKGAGPHS S+WVMRVELGKKQ       TGSP                       
Sbjct: 116 IGVWQKGAGPHSGSNWVMRVELGKKQIITEGESTGSPQSTNIGAVENNEVEVEVEVEEEE 175

Query: 333 XXDRVALQMIEELLNWN 283
             DRVALQMIEELLNWN
Sbjct: 176 EEDRVALQMIEELLNWN 192


>ref|XP_003549279.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Glycine max]
          Length = 199

 Score =  242 bits (617), Expect = 1e-61
 Identities = 125/198 (63%), Positives = 141/198 (71%), Gaps = 11/198 (5%)
 Frame = -2

Query: 831 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXAILMNGQNAKT 652
           MVQ+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET           AILM+GQNAKT
Sbjct: 1   MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMSGQNAKT 60

Query: 651 NFPVSKNNQAEDATNATPCGDDPFLSPKALSELLSTKLRKYCKDPSPSLTCLRLDADNSH 472
           NFP ++ NQ + AT  TPC D PF SP  LSE LS KL++ CKDPSPSLTCLRLDADNSH
Sbjct: 61  NFP-TQMNQPQGATTTTPCVD-PFSSPNVLSEHLSRKLKRCCKDPSPSLTCLRLDADNSH 118

Query: 471 IGVWQKGAGPHSDSSWVMRVELGKK-----------QTETGSPXXXXXXXXXXXXXXXXD 325
           IGVWQKGAGPHSDS+W++RVE+GKK            +  G                  D
Sbjct: 119 IGVWQKGAGPHSDSNWIVRVEIGKKLHAEGESSSVSSSAAGGSPPKPSVGHGDGYGDEED 178

Query: 324 RVALQMIEELLNWNYPCG 271
           R+A+QMI+ELLNWN+PCG
Sbjct: 179 RIAMQMIDELLNWNHPCG 196


Top