BLASTX nr result

ID: Glycyrrhiza24_contig00010091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010091
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37872.1| unknown [Lotus japonicus]                              652   0.0  
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   650   0.0  
gb|AFK43839.1| unknown [Medicago truncatula]                          648   0.0  
ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li...   644   0.0  
ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-li...   625   e-176

>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  652 bits (1682), Expect = 0.0
 Identities = 323/354 (91%), Positives = 334/354 (94%)
 Frame = +3

Query: 150  MLWVDKYRPKTLDNVLVHNDTAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 329
            MLWVDKYRPKTLD V+VH+D AQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 330  PGAEKVKVENRNWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 509
              AEKVKVENR WKVDAGSRSIDLELTTLSSA+HIEM+PSDAGFQDRY+VQEIIKEMAKN
Sbjct: 61   TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120

Query: 510  RPIDTKGKRGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 689
            RPIDTKGK+GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 690  CLNIRINAPSEEQIVEVIEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY 869
            CLNIRINAPSEEQIVEVIEFIGKKEGLQ+PSGFAARIAEKSNRNLRRAILSFETCRVQQY
Sbjct: 181  CLNIRINAPSEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQY 240

Query: 870  PFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXX 1049
            PFT++QTIPPMDWEEYISEIASDIMKEQ+PKRLFQVRGKLYELLINCIPP          
Sbjct: 241  PFTNRQTIPPMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFE 300

Query: 1050 XXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 1211
                 DAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YKSFLIATFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 354


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
            gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  650 bits (1678), Expect = 0.0
 Identities = 321/354 (90%), Positives = 333/354 (94%)
 Frame = +3

Query: 150  MLWVDKYRPKTLDNVLVHNDTAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 329
            MLWVDKYRPKTLD V+VH D A+NLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 330  PGAEKVKVENRNWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 509
            PGAEKVKV+NR WKVDAGSRS+DLELTTLSSANHIEM+PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 510  RPIDTKGKRGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 689
            RPIDTKGK+GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 690  CLNIRINAPSEEQIVEVIEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY 869
            CLN+RINAPSEEQIVEV+EFIGKKEGLQLP GFAARI EKSNRNLRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY 240

Query: 870  PFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXX 1049
            PFT+KQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPP          
Sbjct: 241  PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300

Query: 1050 XXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 1211
                 DAELKHEVCHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYKSFLI+TFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG 354


>gb|AFK43839.1| unknown [Medicago truncatula]
          Length = 354

 Score =  648 bits (1671), Expect = 0.0
 Identities = 320/354 (90%), Positives = 330/354 (93%)
 Frame = +3

Query: 150  MLWVDKYRPKTLDNVLVHNDTAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 329
            MLWVDKYRPKTLD+ +VH+D AQNLKKLVTE DCPHLLFYGPSG+GKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDHAMVHSDIAQNLKKLVTEHDCPHLLFYGPSGAGKKTLIMALLRQMFG 60

Query: 330  PGAEKVKVENRNWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 509
            PGAEKVKVENR WKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61   PGAEKVKVENRAWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 510  RPIDTKGKRGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 689
            RPIDTKGK+GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRL+LCCNSSSRVTEAIRSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLVLCCNSSSRVTEAIRSR 180

Query: 690  CLNIRINAPSEEQIVEVIEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY 869
            CLN+RINAPSEEQIVEV++FIGKKEGLQLPS  AARIAEKSNRNLRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSLAARIAEKSNRNLRRAILSFETCRVQQY 240

Query: 870  PFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXX 1049
            PFT KQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELL NCIPP          
Sbjct: 241  PFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLTNCIPPEIILKRLLYE 300

Query: 1050 XXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 1211
                 DAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YKSFLI TFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLITTFG 354


>ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 354

 Score =  644 bits (1661), Expect = 0.0
 Identities = 319/354 (90%), Positives = 330/354 (93%)
 Frame = +3

Query: 150  MLWVDKYRPKTLDNVLVHNDTAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 329
            MLWVDKYRPKTLD V+VH D A NLKKLVTEQD PHLLFYGPSGSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIAHNLKKLVTEQDSPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 330  PGAEKVKVENRNWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 509
            PGAEKVKVENR WK+DAGSRS+DLELTTLSSANHIEM+PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVENRTWKIDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 510  RPIDTKGKRGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 689
            RPIDTKGK+GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 690  CLNIRINAPSEEQIVEVIEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY 869
            CLN+RINAPSEEQIV+V+EFIGKKEGLQLP GFAARIAEKSNRNLRRAILSFETCRV QY
Sbjct: 181  CLNVRINAPSEEQIVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQY 240

Query: 870  PFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXX 1049
            PFT+KQ IPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPP          
Sbjct: 241  PFTNKQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300

Query: 1050 XXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 1211
                 DAELKHEVCHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 354


>ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-like [Cucumis sativus]
            gi|449521275|ref|XP_004167655.1| PREDICTED: replication
            factor C subunit 3-like [Cucumis sativus]
          Length = 354

 Score =  625 bits (1611), Expect = e-176
 Identities = 302/354 (85%), Positives = 326/354 (92%)
 Frame = +3

Query: 150  MLWVDKYRPKTLDNVLVHNDTAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 329
            MLWVDKYRPKTLD + VH D AQNLKKLV EQDCPHLLFYGPSGSGKKTL+MAL+RQMFG
Sbjct: 1    MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 330  PGAEKVKVENRNWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN 509
            P A+KVKVEN+ WKVDAG+R+ID+ELTTLSSANH+E+TPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61   PSADKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 510  RPIDTKGKRGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 689
            RPID+KGKRG KVLVLNDVDKLSREAQHSLRRTMEKYS+YCRLILCCNSSSRVTEAIRSR
Sbjct: 121  RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 690  CLNIRINAPSEEQIVEVIEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY 869
            CLN+RIN P+EEQI +V+E+IGKKEGLQLPSGFA+RIAEKSNR+LRRAILSFETCRVQQY
Sbjct: 181  CLNVRINGPTEEQIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 870  PFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXX 1049
            PF S Q IPPMDWEEYI+EIAS+IMKEQSPKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFVSNQAIPPMDWEEYITEIASEIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 1050 XXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 1211
                 DAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK+FLI+TFG
Sbjct: 301  LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354


Top