BLASTX nr result

ID: Glycyrrhiza24_contig00010089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010089
         (1862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi...   612   e-172
ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...   581   e-163
ref|XP_003626560.1| hypothetical protein MTR_7g117210 [Medicago ...   551   e-154
ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-l...   549   e-154
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115

>ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi|355525030|gb|AET05484.1|
            THO complex subunit [Medicago truncatula]
          Length = 2048

 Score =  612 bits (1577), Expect = e-172
 Identities = 332/481 (69%), Positives = 355/481 (73%)
 Frame = +2

Query: 2    KEDSRTGKAVTRTSGSSSSDKDLQIHASEGRHTGTXXXXXXXXXXXXXXXXXXXXXXXXX 181
            KED R+GK VTRTSGSSSSDKDLQ HAS+GRHTGT                         
Sbjct: 1575 KEDGRSGKTVTRTSGSSSSDKDLQTHASDGRHTGTNISSSFSANGNSVSGSAKGLAQAAT 1634

Query: 182  XXXYDSPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVVHSPRHENTTTSKS 361
               +D  GNESKAEVGA+K S     MVKDD N+  DFTRGSSSRVVHSPRHENT TSKS
Sbjct: 1635 TA-FDGSGNESKAEVGAAKFS-----MVKDDVNEFADFTRGSSSRVVHSPRHENTATSKS 1688

Query: 362  SDKIQKRAGSVDELDRLGKRRKGDVELRDLEGEVRFSEREKLIDPRLADDKLGPDELGLY 541
            SDKIQKRAGSVDELDRLGKRRKGD++LRDLEGEVRFSEREKL+DPRLADDK+GPDELG+Y
Sbjct: 1689 SDKIQKRAGSVDELDRLGKRRKGDIDLRDLEGEVRFSEREKLMDPRLADDKVGPDELGVY 1748

Query: 542  RAGDKTLERPKDKGNXXXXXXXXXXLDRLDKSRGDDFVADKPRDRSIERYGRERSVERMQ 721
            R GDKTLERPK+KG           LDRLDKSRGDDFV +KPRDRSIERYGRERSVER+Q
Sbjct: 1749 RTGDKTLERPKEKGTDRYEREHRERLDRLDKSRGDDFVVEKPRDRSIERYGRERSVERVQ 1808

Query: 722  ERSSERSFNRLPDKAKDERSKDDRNKLRYNDASMEKSHAEERFHGQXXXXXXXXXXXXXX 901
            ER SERSFNRLPDKAKD+RSKDDRNKLRYNDA++EKSHAE RFHGQ              
Sbjct: 1809 ERGSERSFNRLPDKAKDDRSKDDRNKLRYNDATIEKSHAEGRFHGQSLPPPPPLPPNMVP 1868

Query: 902  QSVGAGRREEDADRRYGATRHSQRLSPXXXXXXXXXXXXTVVSQXXXXXXXXXXXXXXXX 1081
            QS+GAGRR+EDADRRYGATRHSQRLSP            TV+ Q                
Sbjct: 1869 QSLGAGRRDEDADRRYGATRHSQRLSPRHEEKELRRSEETVILQ--DDPKRRKEDDFRDR 1926

Query: 1082 XXXXXXXXXXXXXXANILKEELDLNAASKRRKLKREHLPTSEPGEYSPVAXXXXXXGIGM 1261
                          A+ILKEE DLNAASKRRKLKREHLPT EPGEYSPVA      GIGM
Sbjct: 1927 KREEMKVEEREREKASILKEE-DLNAASKRRKLKREHLPTMEPGEYSPVA--PPLSGIGM 1983

Query: 1262 SQAYDGRDRGDRKGPMIQHASYLDEPSLRIHGKEVASKMNRRDSDPLYDREWDDEKRQRA 1441
            SQAYDGR   DRKGPMIQHASY+DEPSLRIHGKEVASK+NRR+SDPLYDREWDDEKRQRA
Sbjct: 1984 SQAYDGR---DRKGPMIQHASYIDEPSLRIHGKEVASKLNRRESDPLYDREWDDEKRQRA 2040

Query: 1442 D 1444
            D
Sbjct: 2041 D 2041


>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score =  581 bits (1497), Expect = e-163
 Identities = 310/467 (66%), Positives = 333/467 (71%), Gaps = 1/467 (0%)
 Frame = +2

Query: 2    KEDSRTGKAVTRTSGSSSSDKDLQIHASEGRHTGTXXXXXXXXXXXXXXXXXXXXXXXXX 181
            KED R+GK V RTSGS SSDKDLQ HA EGRHTGT                         
Sbjct: 1385 KEDGRSGKPVARTSGSLSSDKDLQTHALEGRHTGTTNISL-------------------- 1424

Query: 182  XXXYDSPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVVHSPRHENTT-TSK 358
                D PGNESKAEVG +KSSDIRASMVKDDGNDITD  RGSSSR+VHSPRHENT  TSK
Sbjct: 1425 ----DGPGNESKAEVGVAKSSDIRASMVKDDGNDITDNPRGSSSRIVHSPRHENTVVTSK 1480

Query: 359  SSDKIQKRAGSVDELDRLGKRRKGDVELRDLEGEVRFSEREKLIDPRLADDKLGPDELGL 538
            S+D++QKRA SV+E DRLGKRRKGDVELRD E E+RFSEREK++DPR ADDKLGP+E GL
Sbjct: 1481 SNDRVQKRASSVEEPDRLGKRRKGDVELRDFETELRFSEREKMMDPRFADDKLGPEEHGL 1540

Query: 539  YRAGDKTLERPKDKGNXXXXXXXXXXLDRLDKSRGDDFVADKPRDRSIERYGRERSVERM 718
            YRA DK LER KDKGN          +DRLDKSRGDDFVA+KPRDRSIERYGRERSVERM
Sbjct: 1541 YRASDKPLERTKDKGNERYERDHRERMDRLDKSRGDDFVAEKPRDRSIERYGRERSVERM 1600

Query: 719  QERSSERSFNRLPDKAKDERSKDDRNKLRYNDASMEKSHAEERFHGQXXXXXXXXXXXXX 898
            QER S+RSFNRLP+KAKDER+KDDRNKLRYNDAS EKSH ++RFHGQ             
Sbjct: 1601 QERGSDRSFNRLPEKAKDERNKDDRNKLRYNDASAEKSHGDDRFHGQSLPPPPPLPPNVV 1660

Query: 899  XQSVGAGRREEDADRRYGATRHSQRLSPXXXXXXXXXXXXTVVSQXXXXXXXXXXXXXXX 1078
             QSVGAGRR+ED DRRYGATRHSQRLSP            TVVSQ               
Sbjct: 1661 PQSVGAGRRDEDVDRRYGATRHSQRLSPRHEEKERRWSEETVVSQDDAKRRKEDDFRDRK 1720

Query: 1079 XXXXXXXXXXXXXXXANILKEELDLNAASKRRKLKREHLPTSEPGEYSPVAXXXXXXGIG 1258
                           ANILKEELDLNAASKRRKLKREHLPT EPGEYS VA      G G
Sbjct: 1721 REEIKVEEREREREKANILKEELDLNAASKRRKLKREHLPTDEPGEYSAVAHPPSSAGTG 1780

Query: 1259 MSQAYDGRDRGDRKGPMIQHASYLDEPSLRIHGKEVASKMNRRDSDP 1399
            M  AYDGRDRGDRKGP++QH SY+DE SLRIHGKE ASK+NRRDSDP
Sbjct: 1781 MPLAYDGRDRGDRKGPIMQHPSYIDESSLRIHGKEAASKLNRRDSDP 1827


>ref|XP_003626560.1| hypothetical protein MTR_7g117210 [Medicago truncatula]
            gi|355501575|gb|AES82778.1| hypothetical protein
            MTR_7g117210 [Medicago truncatula]
          Length = 482

 Score =  551 bits (1421), Expect = e-154
 Identities = 305/481 (63%), Positives = 335/481 (69%)
 Frame = +2

Query: 2    KEDSRTGKAVTRTSGSSSSDKDLQIHASEGRHTGTXXXXXXXXXXXXXXXXXXXXXXXXX 181
            KED+R+GK+V R SGSSS+DKDLQ HAS+GRHT T                         
Sbjct: 16   KEDARSGKSVARASGSSSNDKDLQTHASDGRHTRTNVSSSVNANGYSVPGSAKGLAPSAK 75

Query: 182  XXXYDSPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVVHSPRHENTTTSKS 361
               +D  GNESKAEVGA+KSS     MVKDDGNDI DFTRGSSSR+VHSPRHENT T+KS
Sbjct: 76   IA-FDGSGNESKAEVGAAKSS-----MVKDDGNDIADFTRGSSSRLVHSPRHENTATTKS 129

Query: 362  SDKIQKRAGSVDELDRLGKRRKGDVELRDLEGEVRFSEREKLIDPRLADDKLGPDELGLY 541
            SDKIQKR GSVDELDR  KR KGDV+ RDLEGEVRFSER KL+DPRLADDK  PDELGLY
Sbjct: 130  SDKIQKRTGSVDELDRPSKRWKGDVDPRDLEGEVRFSERGKLLDPRLADDKAAPDELGLY 189

Query: 542  RAGDKTLERPKDKGNXXXXXXXXXXLDRLDKSRGDDFVADKPRDRSIERYGRERSVERMQ 721
            RAG+K+LERPK+KGN          LDRLDKS GDDF+ +KPRDRSIERYGRERS+ERMQ
Sbjct: 190  RAGNKSLERPKEKGNERYEREYRERLDRLDKSHGDDFIIEKPRDRSIERYGRERSIERMQ 249

Query: 722  ERSSERSFNRLPDKAKDERSKDDRNKLRYNDASMEKSHAEERFHGQXXXXXXXXXXXXXX 901
            ER SERSFNRL DKA     KDDR+KL+YND S+EKSH E RFHGQ              
Sbjct: 250  ERGSERSFNRLSDKA-----KDDRSKLQYNDVSIEKSHTEGRFHGQNLHRASPLPPNMVP 304

Query: 902  QSVGAGRREEDADRRYGATRHSQRLSPXXXXXXXXXXXXTVVSQXXXXXXXXXXXXXXXX 1081
            QSVGAGRR+EDADRRYGATRHSQRLSP            TV+ Q                
Sbjct: 305  QSVGAGRRDEDADRRYGATRHSQRLSPRHEEKELRRSEETVILQ---DDPKRRKEDFQDQ 361

Query: 1082 XXXXXXXXXXXXXXANILKEELDLNAASKRRKLKREHLPTSEPGEYSPVAXXXXXXGIGM 1261
                          +NILKEE   NAASKRRKL REHLPT EPGEY PV       GIGM
Sbjct: 362  KREEMKEEEREREKSNILKEE-GFNAASKRRKLTREHLPTMEPGEYLPV---NPLPGIGM 417

Query: 1262 SQAYDGRDRGDRKGPMIQHASYLDEPSLRIHGKEVASKMNRRDSDPLYDREWDDEKRQRA 1441
            SQAYDGR   DR+G MIQHASY+DEPSLRIHGKE++SK+NRR+SDP+YDREWDDE RQRA
Sbjct: 418  SQAYDGR---DRRGRMIQHASYIDEPSLRIHGKELSSKLNRRESDPVYDREWDDENRQRA 474

Query: 1442 D 1444
            D
Sbjct: 475  D 475


>ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-like [Glycine max]
          Length = 1728

 Score =  549 bits (1415), Expect = e-154
 Identities = 298/467 (63%), Positives = 326/467 (69%), Gaps = 1/467 (0%)
 Frame = +2

Query: 2    KEDSRTGKAVTRTSGSSSSDKDLQIHASEGRHTGTXXXXXXXXXXXXXXXXXXXXXXXXX 181
            KED R+GK V RTSGSSSSDK+LQ HA EGR+TGT                         
Sbjct: 1293 KEDGRSGKPVARTSGSSSSDKELQTHALEGRYTGTT------------------------ 1328

Query: 182  XXXYDSPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVVHSPRHENT-TTSK 358
                + P +      G++K     ASMVKDDGNDITD  RG+SSRVVHSPR+ENT  TSK
Sbjct: 1329 ----NVPSSNGNTISGSTK-----ASMVKDDGNDITDNPRGASSRVVHSPRYENTGVTSK 1379

Query: 359  SSDKIQKRAGSVDELDRLGKRRKGDVELRDLEGEVRFSEREKLIDPRLADDKLGPDELGL 538
            S+DK+QKRA S +E DRLGKRRKGDVELRD E EVRFSEREK++DPR ADDK GP+E GL
Sbjct: 1380 SNDKVQKRASSAEEPDRLGKRRKGDVELRDFETEVRFSEREKMMDPRFADDKSGPEEHGL 1439

Query: 539  YRAGDKTLERPKDKGNXXXXXXXXXXLDRLDKSRGDDFVADKPRDRSIERYGRERSVERM 718
            YRAGDK LER KDKGN          +DRLDKSRGDDFVA+KPRDRSIERYGRERSVERM
Sbjct: 1440 YRAGDKPLERAKDKGNERYERDHRERMDRLDKSRGDDFVAEKPRDRSIERYGRERSVERM 1499

Query: 719  QERSSERSFNRLPDKAKDERSKDDRNKLRYNDASMEKSHAEERFHGQXXXXXXXXXXXXX 898
            QER S+RSFNRLP+KAKDER+KDDRNKLRYNDAS+EKSH ++RFHGQ             
Sbjct: 1500 QERGSDRSFNRLPEKAKDERNKDDRNKLRYNDASVEKSHGDDRFHGQSLPPPPPLPPNVV 1559

Query: 899  XQSVGAGRREEDADRRYGATRHSQRLSPXXXXXXXXXXXXTVVSQXXXXXXXXXXXXXXX 1078
             QSVGAGRR+ED DRRYGATRHSQRLSP            TVVSQ               
Sbjct: 1560 PQSVGAGRRDEDVDRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDAKRRKEDDFRDRK 1619

Query: 1079 XXXXXXXXXXXXXXXANILKEELDLNAASKRRKLKREHLPTSEPGEYSPVAXXXXXXGIG 1258
                           ANILKEELDLNAASKRRK KREHLPT EPGEYSPVA      GIG
Sbjct: 1620 REEIKVEEREREREKANILKEELDLNAASKRRKPKREHLPTGEPGEYSPVAHPPSSAGIG 1679

Query: 1259 MSQAYDGRDRGDRKGPMIQHASYLDEPSLRIHGKEVASKMNRRDSDP 1399
            MS AYDGRDRGDRKGP++QH SY+DE SLRIHGKEVASK+NRRDSDP
Sbjct: 1680 MSLAYDGRDRGDRKGPIMQHPSYVDESSLRIHGKEVASKLNRRDSDP 1726


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
            predicted protein [Populus trichocarpa]
          Length = 1805

 Score =  420 bits (1079), Expect = e-115
 Identities = 241/491 (49%), Positives = 299/491 (60%), Gaps = 10/491 (2%)
 Frame = +2

Query: 2    KEDSRTGKAVTRTSGSSSSDKDLQIHASEGRHTGTXXXXXXXXXXXXXXXXXXXXXXXXX 181
            K+D+++GK V RT  SS+SDKD+Q+H SEGR  G                          
Sbjct: 1344 KDDNKSGKGVGRTLSSSTSDKDIQVHLSEGRQGGASNVSSVLT----------------- 1386

Query: 182  XXXYDSPGNESKAEVGASKSSDIRASMVKDDGNDITDFTRGSSSRVVHSPRHENTTT-SK 358
                    NESK + G +K       M+KD+  ++ D  +   SR+VHSPRH+N+   SK
Sbjct: 1387 -------SNESKPDSGGNKP------MLKDEATEVADVQK-PPSRLVHSPRHDNSVAASK 1432

Query: 359  SSDKIQKRAGSVDELDRLGKRRKGDVELRDLEGEVRFSEREKLIDPRLAD-DKLGPDELG 535
            SSDK+QKRA   +E DRL KR+KGDVELRDLEGEV+FSERE+  D R AD DK+G DE  
Sbjct: 1433 SSDKLQKRASPAEEPDRLSKRQKGDVELRDLEGEVKFSERERSTDTRSADLDKVGNDEHN 1492

Query: 536  LYRAGDKTLERPKDKGNXXXXXXXXXXLDRLDKSRGDDFVADKPRDRSIERYGRERSVER 715
            LYR+ DK L+R KDKGN           +R DKSRGDD +AD+ RD+S+ERYGRE SVER
Sbjct: 1493 LYRSVDKPLDRSKDKGNDRYDRDHRERSERPDKSRGDDSLADRSRDKSMERYGRELSVER 1552

Query: 716  MQERSSERSFNRLPDKAKDERSKDDRNKLRYNDASMEKSHAEERFHGQXXXXXXXXXXXX 895
             Q+R ++RSF+RL DKA     KDDR+KLRYND S EKS  ++RFHGQ            
Sbjct: 1553 GQDRVADRSFDRLADKA-----KDDRSKLRYNDTSAEKSQVDDRFHGQNLPPPPPLPPHM 1607

Query: 896  XXQSVGAGRREEDADRRYGATRHSQRLSP-XXXXXXXXXXXXTVVSQ-------XXXXXX 1051
              QSV +GRR+EDADRR+G TRH QRLSP             ++VSQ             
Sbjct: 1608 VPQSVTSGRRDEDADRRFGTTRHVQRLSPRHDEKERRRSEENSLVSQDDAKRRKEDDVRE 1667

Query: 1052 XXXXXXXXXXXXXXXXXXXXXXXXANILKEELDLNAASKRRKLKREHLPTSEPGEYSPVA 1231
                                     N+ KEE+D +A +KRRKLKR+HLPT E GEYSPVA
Sbjct: 1668 RKREEREGLSIKVEEREREREREKTNLPKEEMDSSATAKRRKLKRDHLPTGEAGEYSPVA 1727

Query: 1232 XXXXXXGIGMSQAYDGRDRGDRKGPMIQHASYLDEPSLRIHGKEVASKMNRRDSDPLYDR 1411
                  GIG+S +YDGR+RGDRKG M Q ASYL+EP +RIHGK+V  KM RRD+DP+YDR
Sbjct: 1728 PPPPPLGIGISHSYDGRERGDRKGAMNQRASYLEEPLMRIHGKDVVGKMGRRDTDPMYDR 1787

Query: 1412 EWDDEKRQRAD 1444
            EWD++KRQRA+
Sbjct: 1788 EWDEDKRQRAE 1798


Top