BLASTX nr result

ID: Glycyrrhiza24_contig00010078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010078
         (1568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   540   e-151
ref|XP_003617180.1| Thioredoxin-related protein [Medicago trunca...   527   e-147
ref|XP_003617178.1| Thioredoxin-related protein [Medicago trunca...   527   e-147
gb|AFK46565.1| unknown [Medicago truncatula]                          523   e-146
ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   516   e-144

>ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356554227|ref|XP_003545450.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max] gi|356554229|ref|XP_003545451.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Glycine
            max] gi|356554231|ref|XP_003545452.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 4 [Glycine
            max]
          Length = 336

 Score =  540 bits (1392), Expect = e-151
 Identities = 266/340 (78%), Positives = 278/340 (81%), Gaps = 7/340 (2%)
 Frame = -1

Query: 1244 MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQH--TFSSNSGEFHQM 1071
            MSSGATHWC+AC QPIVL+GRD VCPYCDGGFVQEL+ELRGIAP H  TFSS SG+FHQM
Sbjct: 1    MSSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQM 60

Query: 1070 PDLFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXPEQGW 891
            PD+FDAIHAFMG RGSD R GL+DAVDNFMRHRMAGR+ NFD              EQ W
Sbjct: 61   PDIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAGRNSNFDVRGRSGSLPVP---EQSW 117

Query: 890  GVYSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDRHGPP 717
            GVYSSGPYLIFH GQ  GFT S GSPRGGPRRVDFGDYFMG GLEELIEQLTMND+ GP 
Sbjct: 118  GVYSSGPYLIFH-GQVPGFTLSAGSPRGGPRRVDFGDYFMGPGLEELIEQLTMNDQRGPA 176

Query: 716  PAARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQH 537
            PAARSSIDAMPTIKITQAHLR DSHCPVCKEKFELG+EAREMPCNHIYHSDCIVPWLVQH
Sbjct: 177  PAARSSIDAMPTIKITQAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQH 236

Query: 536  NSCPVCRVELPPQGHVXXXXXXXXXXXXXXXXXGT---DSSRGSRENDHQNHGRRNPLSF 366
            NSCPVCRVELPPQG                    +   DSSRG REN HQNHGRRNP SF
Sbjct: 237  NSCPVCRVELPPQGQASSRGTRSWGGRNASNSSSSGSNDSSRG-RENSHQNHGRRNPFSF 295

Query: 365  LWPFRSSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFD 246
            LWPFRSS+SNNNHY+ETGGSSSST PDQNNGT YSGWPFD
Sbjct: 296  LWPFRSSNSNNNHYSETGGSSSSTTPDQNNGTSYSGWPFD 335


>ref|XP_003617180.1| Thioredoxin-related protein [Medicago truncatula]
            gi|355518515|gb|AET00139.1| Thioredoxin-related protein
            [Medicago truncatula]
          Length = 371

 Score =  527 bits (1357), Expect = e-147
 Identities = 257/336 (76%), Positives = 276/336 (82%), Gaps = 2/336 (0%)
 Frame = -1

Query: 1244 MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 1065
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 47   MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 106

Query: 1064 LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXPEQGWGV 885
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 107  LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 163

Query: 884  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDRHGPPPA 711
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMNDR GPPPA
Sbjct: 164  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 222

Query: 710  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 531
            ARSSIDAMPTI+ITQAHLR DSHCPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 223  ARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 282

Query: 530  CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXGTDSSRGSRENDHQNHGRRNPLSFLWPFR 351
            CPVCRVELPPQG +                 G  SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 283  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 335

Query: 350  SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 243
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 336  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 371


>ref|XP_003617178.1| Thioredoxin-related protein [Medicago truncatula]
            gi|355518513|gb|AET00137.1| Thioredoxin-related protein
            [Medicago truncatula]
          Length = 325

 Score =  527 bits (1357), Expect = e-147
 Identities = 257/336 (76%), Positives = 276/336 (82%), Gaps = 2/336 (0%)
 Frame = -1

Query: 1244 MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 1065
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 1    MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 60

Query: 1064 LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXPEQGWGV 885
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 61   LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 117

Query: 884  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDRHGPPPA 711
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMNDR GPPPA
Sbjct: 118  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 176

Query: 710  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 531
            ARSSIDAMPTI+ITQAHLR DSHCPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 177  ARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 236

Query: 530  CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXGTDSSRGSRENDHQNHGRRNPLSFLWPFR 351
            CPVCRVELPPQG +                 G  SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 237  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 289

Query: 350  SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 243
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 290  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 325


>gb|AFK46565.1| unknown [Medicago truncatula]
          Length = 325

 Score =  523 bits (1347), Expect = e-146
 Identities = 256/336 (76%), Positives = 275/336 (81%), Gaps = 2/336 (0%)
 Frame = -1

Query: 1244 MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 1065
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 1    MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 60

Query: 1064 LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXPEQGWGV 885
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 61   LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 117

Query: 884  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDRHGPPPA 711
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMNDR GPPPA
Sbjct: 118  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 176

Query: 710  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 531
            ARSSIDAMPTI+ITQAHLR DS CPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 177  ARSSIDAMPTIRITQAHLRSDSPCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 236

Query: 530  CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXGTDSSRGSRENDHQNHGRRNPLSFLWPFR 351
            CPVCRVELPPQG +                 G  SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 237  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 289

Query: 350  SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 243
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 290  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 325


>ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            RING1-like [Glycine max]
          Length = 335

 Score =  516 bits (1329), Expect = e-144
 Identities = 255/339 (75%), Positives = 270/339 (79%), Gaps = 6/339 (1%)
 Frame = -1

Query: 1244 MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 1065
            MSSGATHWCHAC QP+VL+GRD VCPYCDGGFVQEL+EL GIAP HTF S SGEFHQMPD
Sbjct: 1    MSSGATHWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTFCSQSGEFHQMPD 60

Query: 1064 LFDAIHAFMGHRGSDHRVGLID-AVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXPEQGWG 888
            +FDAI AFMG RGSD R  L+D AVDNFMRHR AGR+ NFD              E+ WG
Sbjct: 61   IFDAIPAFMGQRGSDQRSRLMDDAVDNFMRHRTAGRNSNFDVRGRSGSRPVP---ERSWG 117

Query: 887  VYSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDRHGPPP 714
            V+SSGPYLIFH GQ  G TF+ GSPRGG R VDFGDYFMG GLEELIEQLTMNDR GPPP
Sbjct: 118  VFSSGPYLIFH-GQVPGSTFAAGSPRGGSRHVDFGDYFMGLGLEELIEQLTMNDRRGPPP 176

Query: 713  AARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHN 534
            AA SSIDAMPTIKITQAHLRLDSHCPVCKEKFELG+EAREMPCNHIYHSDCIVPWLVQHN
Sbjct: 177  AALSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHN 236

Query: 533  SCPVCRVELPPQGHVXXXXXXXXXXXXXXXXXGT---DSSRGSRENDHQNHGRRNPLSFL 363
            SCPVCRVELPPQG                    +   DSSRG REN  QNHGRRNP SFL
Sbjct: 237  SCPVCRVELPPQGQASSRGTQNWGGRNDSNTSSSGSNDSSRG-RENSRQNHGRRNPSSFL 295

Query: 362  WPFRSSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFD 246
            WPFRSS+SNNNH+++TGGSSSS  PDQNNGT YSGWPFD
Sbjct: 296  WPFRSSNSNNNHHSDTGGSSSSNTPDQNNGTSYSGWPFD 334


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