BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010059
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerases I, I...   108   5e-29
ref|XP_003517695.1| PREDICTED: DNA-directed RNA polymerases I, I...   107   4e-28
ref|XP_003526546.1| PREDICTED: DNA-directed RNA polymerases I, I...   108   7e-28
ref|NP_176363.1| DNA-directed RNA polymerases II subunit L [Arab...   106   9e-28
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221...   109   3e-27

>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Glycine max]
          Length = 71

 Score =  108 bits (269), Expect(2) = 5e-29
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 150
           FTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 8   FTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIE 57



 Score = 45.4 bits (106), Expect(2) = 5e-29
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +2

Query: 218 HVDLIEKLLNYNTLDKSDPN 277
           HVDLIEKLLNYNTLDKSDPN
Sbjct: 52  HVDLIEKLLNYNTLDKSDPN 71


>ref|XP_003517695.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Glycine max] gi|356502404|ref|XP_003520009.1|
           PREDICTED: DNA-directed RNA polymerases I, II, and III
           subunit RPABC5-like [Glycine max]
           gi|255631340|gb|ACU16037.1| unknown [Glycine max]
          Length = 71

 Score =  107 bits (266), Expect(2) = 4e-28
 Identities = 48/50 (96%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 150
           FTCGKVIGNKWDTYLDLLQ+DY+EGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 8   FTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIE 57



 Score = 43.5 bits (101), Expect(2) = 4e-28
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +2

Query: 218 HVDLIEKLLNYNTLDKSDPN 277
           HVDLIEKLLNYNTLDKSDP+
Sbjct: 52  HVDLIEKLLNYNTLDKSDPS 71


>ref|XP_003526546.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Glycine max]
          Length = 71

 Score =  108 bits (269), Expect(2) = 7e-28
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 150
           FTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 8   FTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIE 57



 Score = 41.6 bits (96), Expect(2) = 7e-28
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +2

Query: 218 HVDLIEKLLNYNTLDKSDPN 277
           HVDLIEKLLNYNTLDKSD N
Sbjct: 52  HVDLIEKLLNYNTLDKSDLN 71


>ref|NP_176363.1| DNA-directed RNA polymerases II subunit L [Arabidopsis thaliana]
           gi|297840381|ref|XP_002888072.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|11134747|sp|Q9SYA6.1|RPAB5_ARATH RecName:
           Full=DNA-directed RNA polymerases I, II, and III subunit
           RPABC5; Short=RNA polymerases I, II, and III subunit
           ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed
           RNA polymerase III subunit L; AltName: Full=RPB10
           homolog gi|4508082|gb|AAD21426.1| Putative RNA
           polymerase II subunit Rpb10 [Arabidopsis thaliana]
           gi|297333913|gb|EFH64331.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332195756|gb|AEE33877.1| DNA-directed RNA polymerases
           II subunit L [Arabidopsis thaliana]
          Length = 71

 Score =  106 bits (264), Expect(2) = 9e-28
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 150
           FTCGKVIGNKWDTYL+LLQADY EGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 8   FTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIE 57



 Score = 43.1 bits (100), Expect(2) = 9e-28
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +2

Query: 218 HVDLIEKLLNYNTLDKSDPN 277
           HVDLIEKLLNYNT++KSDPN
Sbjct: 52  HVDLIEKLLNYNTMEKSDPN 71


>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
           [Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
           [Picea sitchensis]
          Length = 71

 Score =  109 bits (273), Expect(2) = 3e-27
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 150
           FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 8   FTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 57



 Score = 38.1 bits (87), Expect(2) = 3e-27
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +2

Query: 218 HVDLIEKLLNYNTLDKSDPN 277
           HVDLIEKLLNYNTL++S+ N
Sbjct: 52  HVDLIEKLLNYNTLERSETN 71