BLASTX nr result

ID: Glycyrrhiza24_contig00010043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010043
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555213.1| PREDICTED: probable ubiquitin-conjugating en...   178   5e-43
ref|XP_002521277.1| conserved hypothetical protein [Ricinus comm...   131   5e-29
ref|XP_002277945.1| PREDICTED: probable ubiquitin-conjugating en...   130   1e-28
ref|XP_004158402.1| PREDICTED: probable ubiquitin-conjugating en...   103   2e-20
ref|XP_004147048.1| PREDICTED: probable ubiquitin-conjugating en...   103   2e-20

>ref|XP_003555213.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like
           [Glycine max]
          Length = 1123

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/131 (67%), Positives = 94/131 (71%)
 Frame = -3

Query: 395 SPKNLKLLSCFAHANWQLGDWCLLPTSALPXXXXXXXXXXXSEPNDSVNIELDPNQTGSG 216
           SPKNLKLLSCFAHANWQLGDWCLLP+S L             E +DS N ELD NQTGSG
Sbjct: 337 SPKNLKLLSCFAHANWQLGDWCLLPSSVLSSSASMDKGISKLELSDSANNELDSNQTGSG 396

Query: 215 CDSEEATVEESNGNKDAMDLDPVGALEGNDGNDRXXXXXXXXXXXXXXXXSKDPVHEAWP 36
           CDSEEATVEE+NGNKD+MDLDP   LEGNDGND+                SK+PVHEAWP
Sbjct: 397 CDSEEATVEETNGNKDSMDLDPADVLEGNDGNDKSNPSRDSSSCSSSISVSKEPVHEAWP 456

Query: 35  LHRKKIRKVVI 3
           LHRKKIRKVVI
Sbjct: 457 LHRKKIRKVVI 467


>ref|XP_002521277.1| conserved hypothetical protein [Ricinus communis]
           gi|223539545|gb|EEF41133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/132 (53%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 SPKNLKLLSCFAHANWQLGDWCLLP-TSALPXXXXXXXXXXXSEPNDSVNIELDPNQTGS 219
           SPKNLKLLSCF+HANWQ+GDWCLLP T                  +DS    LD +Q G+
Sbjct: 347 SPKNLKLLSCFSHANWQVGDWCLLPSTIKQSSSITLDKGLSKLVLHDSNKSNLDASQVGN 406

Query: 218 GCDSEEATVEESNGNKDAMDLDPVGALEGNDGNDRXXXXXXXXXXXXXXXXSKDPVHEAW 39
            CDSEEA V+ES  N + MD+DPV     NDGN R                SKDPVHE W
Sbjct: 407 ECDSEEAVVDESEENNETMDIDPVVVPHKNDGNTRNNVSPESSSCGSSISVSKDPVHETW 466

Query: 38  PLHRKKIRKVVI 3
           PLHRKKIRKVVI
Sbjct: 467 PLHRKKIRKVVI 478


>ref|XP_002277945.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Vitis
           vinifera]
          Length = 1154

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/131 (49%), Positives = 83/131 (63%)
 Frame = -3

Query: 395 SPKNLKLLSCFAHANWQLGDWCLLPTSALPXXXXXXXXXXXSEPNDSVNIELDPNQTGSG 216
           +PKNLKLLSCFAHANWQ+GDWCLLP+ AL             EP+DSV  ELD +++ S 
Sbjct: 340 NPKNLKLLSCFAHANWQVGDWCLLPSLALSSSITQDKGQSELEPHDSVQGELDSSKSRSR 399

Query: 215 CDSEEATVEESNGNKDAMDLDPVGALEGNDGNDRXXXXXXXXXXXXXXXXSKDPVHEAWP 36
           CD EE  +EE++G  ++MDLD V A++ N+ N                  SK+PVHE W 
Sbjct: 400 CDQEEVLLEEAHGTGESMDLDAVSAVDVNNRNIEGNASSQSSPCSSSVSVSKEPVHETWL 459

Query: 35  LHRKKIRKVVI 3
           LHRKKIRK+V+
Sbjct: 460 LHRKKIRKLVV 470


>ref|XP_004158402.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like
           [Cucumis sativus]
          Length = 1164

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/131 (42%), Positives = 72/131 (54%)
 Frame = -3

Query: 395 SPKNLKLLSCFAHANWQLGDWCLLPTSALPXXXXXXXXXXXSEPNDSVNIELDPNQTGSG 216
           +PKNL+LL+CF+HANWQLGDWCLLP S              S+   SV   LD  Q+   
Sbjct: 364 TPKNLRLLTCFSHANWQLGDWCLLPPS-----FSAGLTKDPSQTELSVTNTLDCAQSVGA 418

Query: 215 CDSEEATVEESNGNKDAMDLDPVGALEGNDGNDRXXXXXXXXXXXXXXXXSKDPVHEAWP 36
           CDSE+  ++E +G  ++ DLD + A +GN  N                   K+  HE WP
Sbjct: 419 CDSEDTVLDELSGTTESTDLDSISACDGNYRN----PVDNSLPESSSSRALKETAHETWP 474

Query: 35  LHRKKIRKVVI 3
           LHRKKIRKVV+
Sbjct: 475 LHRKKIRKVVV 485


>ref|XP_004147048.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like
           [Cucumis sativus]
          Length = 1138

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/131 (42%), Positives = 72/131 (54%)
 Frame = -3

Query: 395 SPKNLKLLSCFAHANWQLGDWCLLPTSALPXXXXXXXXXXXSEPNDSVNIELDPNQTGSG 216
           +PKNL+LL+CF+HANWQLGDWCLLP S              S+   SV   LD  Q+   
Sbjct: 338 TPKNLRLLTCFSHANWQLGDWCLLPPS-----FSAGLTKDPSQTELSVTNTLDCAQSVGA 392

Query: 215 CDSEEATVEESNGNKDAMDLDPVGALEGNDGNDRXXXXXXXXXXXXXXXXSKDPVHEAWP 36
           CDSE+  ++E +G  ++ DLD + A +GN  N                   K+  HE WP
Sbjct: 393 CDSEDTVLDELSGTTESTDLDSISACDGNYRN----PVDNSLPESSSSRALKETAHETWP 448

Query: 35  LHRKKIRKVVI 3
           LHRKKIRKVV+
Sbjct: 449 LHRKKIRKVVV 459


Top