BLASTX nr result
ID: Glycyrrhiza24_contig00010018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00010018
(2632 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g... 835 0.0
ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [... 817 0.0
ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatul... 780 0.0
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g... 419 e-114
ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g... 368 5e-99
>ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 602
Score = 835 bits (2156), Expect = 0.0
Identities = 457/613 (74%), Positives = 488/613 (79%), Gaps = 5/613 (0%)
Frame = -1
Query: 2185 MQDPTSAAVETDRHQHHHKHPPPAMRNNRT-----KRPVFKVLPGQIAFRLVCHAXXXXX 2021
MQDP ++ +TD H P P N T KRPVFKVLPGQIAFRLVCHA
Sbjct: 1 MQDPATS--DTD----HQTTPSPKRSNTTTTNRSSKRPVFKVLPGQIAFRLVCHASTVGG 54
Query: 2020 XXXXXXXXXSQLRRETGCKIHCEDSVATTEDRVILVIGSLSPRKGLALGGDGEVDVSSPQ 1841
SQLRRETGCKIHCEDS+++ EDRVILVIGSLSPRKGL LG GEV+VSS Q
Sbjct: 55 LIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLLGDGGEVEVSSAQ 114
Query: 1840 EAAVRVFERVWELEAEKGVNNPNRGTINGEVVCKLLAHTSQIGAVVGKGGKNITTIRNNS 1661
EA VRVFERVW+LEAEKGVN+ NR +NGEV KLLAHTSQIGAVVGKGGKNIT IRNN+
Sbjct: 115 EAVVRVFERVWDLEAEKGVNS-NRA-VNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNT 172
Query: 1660 GAKIRVCPPPHCAAKDEELVLITGEIMAVKKALIAVSHCLQDCPPLGKAXXXXXXXXXXX 1481
GAKIRV PPP CA KDEELV ITG I+AVKKALI+VSHCLQDCPPL K
Sbjct: 173 GAKIRVFPPPQCATKDEELVQITGGILAVKKALISVSHCLQDCPPLCKVPVTSSTPTVSS 232
Query: 1480 XXXXXXXPQVELFPHLNSWLPSMENLTLNDASKRTTNSNGTPSFDSNGTERQVVFRLLCS 1301
P ELFPHLNS L SME L++ + RTTNSN T + DS G E +VVFRLLCS
Sbjct: 233 SDRLSSDPNAELFPHLNSLLTSMEGLSIYE---RTTNSNETSNRDSKGAEHEVVFRLLCS 289
Query: 1300 NNIAGSVIGKRGAIVRALESKTGASIIFAAPLSKFEERVVTISASENLESSYSPAQDAVI 1121
NN+AGSVIGKRGAIVRALESKTGASIIFAAPLS+ ER+VTISA E+LES SPAQDAVI
Sbjct: 290 NNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVI 349
Query: 1120 LVFARIIEDQIGKGFLPASSAESPVTARLLVAPSTINRLTGNEGQVISELREVTGADIQI 941
LVFARIIED IGKGFL SS ESPVTARLLVA ST+N +GNEGQVISELREVTGADIQI
Sbjct: 350 LVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQI 409
Query: 940 LHGEPVPNGASDNDVVVQITGGYTCVQNALYKITCRIRDNLFPNEVHAEARMKSSFHGNK 761
LHGE VPNGASD DVVVQITG Y CVQNALYKIT RIRDNL PNEV AEAR KS++ NK
Sbjct: 410 LHGESVPNGASDEDVVVQITGEYRCVQNALYKITSRIRDNLSPNEVVAEARPKSNWKVNK 469
Query: 760 DTIKGKLFGHGKSTFPSGRFPPQNAGVPTETISENGELLTNSSENLEHGRGNMLATVTNT 581
D IKGK F GKS FPSGRF P+NAGV ETI +NGEL T+ SENLE GRGNM ATVTNT
Sbjct: 470 DPIKGKPFARGKSAFPSGRFLPRNAGVHAETILQNGELHTDLSENLERGRGNMFATVTNT 529
Query: 580 TVEIVVSEHVFGSVYGEDGGNVDRIRQISGASVTVYDPCVGTSGGKVVISGTPDQTFAAQ 401
TVEI+VSEHVFGSVYGEDGGN+DRIRQISGA VTVYDP VGTSGGKVVISGTPDQTFAAQ
Sbjct: 530 TVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKVVISGTPDQTFAAQ 589
Query: 400 SLLQAFIQTGQVS 362
SLLQAFIQTGQ S
Sbjct: 590 SLLQAFIQTGQAS 602
>ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 817 bits (2111), Expect = 0.0
Identities = 447/618 (72%), Positives = 484/618 (78%), Gaps = 10/618 (1%)
Frame = -1
Query: 2185 MQDPTSAAVETDRHQHHHKHPPPAMRNNRT----------KRPVFKVLPGQIAFRLVCHA 2036
MQDP ++ +T HQ P R T KRPVFKVLPGQIAFRLVCHA
Sbjct: 1 MQDPATS--DTTDHQTTPSPSPSPKRKTTTTTTTTNRSNNKRPVFKVLPGQIAFRLVCHA 58
Query: 2035 XXXXXXXXXXXXXXSQLRRETGCKIHCEDSVATTEDRVILVIGSLSPRKGLALGGDGEVD 1856
SQLRRET CKIHCEDS+++ EDRVILVIGS+SPRKGL LG GEV+
Sbjct: 59 SIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKGLQLGDGGEVE 118
Query: 1855 VSSPQEAAVRVFERVWELEAEKGVNNPNRGTINGEVVCKLLAHTSQIGAVVGKGGKNITT 1676
VSS QEA VRVFERVW LEAEKGVN+ NR +N EV KLLAHTSQIGAVVGKGGKNIT
Sbjct: 119 VSSAQEAIVRVFERVWGLEAEKGVNS-NRA-VNSEVFSKLLAHTSQIGAVVGKGGKNITA 176
Query: 1675 IRNNSGAKIRVCPPPHCAAKDEELVLITGEIMAVKKALIAVSHCLQDCPPLGKAXXXXXX 1496
IRN++GAKIRVCPPP CA KDEELVLITG I+AVKKALI+VSHCLQDCPPL K
Sbjct: 177 IRNSTGAKIRVCPPPQCATKDEELVLITGGILAVKKALISVSHCLQDCPPLCKVPVSSSI 236
Query: 1495 XXXXXXXXXXXXPQVELFPHLNSWLPSMENLTLNDASKRTTNSNGTPSFDSNGTERQVVF 1316
P ELFP LNS L SME L++ + RTTNSN + + DS G E +VVF
Sbjct: 237 PTVSSFDRSSSDPNAELFPRLNSLLTSMEGLSIYE---RTTNSNESSNRDSKGGEHEVVF 293
Query: 1315 RLLCSNNIAGSVIGKRGAIVRALESKTGASIIFAAPLSKFEERVVTISASENLESSYSPA 1136
RLLCSNN+AGSVIGKRGAIVRALESKTGASIIFAAPLS+ ER+VTISA E+LES SPA
Sbjct: 294 RLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLESCNSPA 353
Query: 1135 QDAVILVFARIIEDQIGKGFLPASSAESPVTARLLVAPSTINRLTGNEGQVISELREVTG 956
QDAVILVFARIIED IGKGFL SS ESPVTARLLVA ST+N +GNEGQVI ELREVTG
Sbjct: 354 QDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILELREVTG 413
Query: 955 ADIQILHGEPVPNGASDNDVVVQITGGYTCVQNALYKITCRIRDNLFPNEVHAEARMKSS 776
ADIQILHGE VPNGASD+DVVVQITG Y CVQNALYKIT RIRDNL PNE EAR KS+
Sbjct: 414 ADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVTEARPKSN 473
Query: 775 FHGNKDTIKGKLFGHGKSTFPSGRFPPQNAGVPTETISENGELLTNSSENLEHGRGNMLA 596
+ NKD +KGK F GKS FPSGRF P+NAGV ETI +NGEL T+ SENLE GRGNM A
Sbjct: 474 WKVNKDPVKGKPFSRGKSAFPSGRFLPRNAGVHAETILQNGELHTDLSENLERGRGNMFA 533
Query: 595 TVTNTTVEIVVSEHVFGSVYGEDGGNVDRIRQISGASVTVYDPCVGTSGGKVVISGTPDQ 416
TVTNTTVEI+VSEHVFGSVYGEDGGN+DRIRQISGA+VTVYDP VGTSGGKVVISGTPDQ
Sbjct: 534 TVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVISGTPDQ 593
Query: 415 TFAAQSLLQAFIQTGQVS 362
T AAQSLLQAFIQTG+VS
Sbjct: 594 TLAAQSLLQAFIQTGEVS 611
>ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein
[Medicago truncatula]
Length = 596
Score = 780 bits (2013), Expect = 0.0
Identities = 417/611 (68%), Positives = 477/611 (78%), Gaps = 3/611 (0%)
Frame = -1
Query: 2185 MQDPT-SAAVETDRHQHHHKHPPPAMRNNRTKRPVFKVLPGQIAFRLVCHAXXXXXXXXX 2009
MQDPT SAAVET H H PP RNNR KRPVFK+LPGQIAFRLVCH+
Sbjct: 1 MQDPTFSAAVETTDHHHPQ---PPLKRNNR-KRPVFKLLPGQIAFRLVCHSSTVGGLIGS 56
Query: 2008 XXXXXSQLRRETGCKIHCEDSVATTEDRVILVIGSLSPRKGLALGGDGEVDVSSPQEAAV 1829
SQLRRETGCKIHCED+V T+DRVILVIGS+S RKG+ LG D E++VS+ QE V
Sbjct: 57 SGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGIVLG-DREMEVSNAQEGVV 115
Query: 1828 RVFERVWELEAEKGVNNPNRGTINGEVVCKLLAHTSQIGAVVGKGGKNITTIRNNSGAKI 1649
RVF+RVW LE+EKG N GEV KLLAH+SQ+GA+VGKGGKNI+ IRNNSG+ I
Sbjct: 116 RVFDRVWGLESEKGGN--------GEVYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSNI 167
Query: 1648 RVCPPPHCAAKDEELVLITGEIMAVKKALIAVSHCLQDCPPLGKAXXXXXXXXXXXXXXX 1469
RVCP PHCAAKDEEL+LITGE +AVKKALI VS+CLQDCPP+GK
Sbjct: 168 RVCPAPHCAAKDEELILITGESLAVKKALIYVSYCLQDCPPMGKVSLNTPPTINSSDRST 227
Query: 1468 XXXPQVELFPHLNSWLPSMENLTLNDASKRTTNSNGTPSFDSNGTERQVVFRLLCSNNIA 1289
+ +LFPHLNSWLPSME L++NDASK+TTN+NG S DS G+ VVFRLLCSNN+A
Sbjct: 228 SYTHE-DLFPHLNSWLPSMEGLSINDASKQTTNANGNSSLDSKGSGHAVVFRLLCSNNVA 286
Query: 1288 GSVIGKRGAIVRALESKTGASIIFAAPLSKFEERVVTISASENLESSYSPAQDAVILVFA 1109
GSVIGK+G+IVR E +TGASI+FA PL ++EER+VTISA ENLESS SPAQDAVILVF
Sbjct: 287 GSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFT 346
Query: 1108 RIIEDQIGKGFLPASSAESPVTARLLVAPSTINRLTGNEGQVISELREVTGADIQILHGE 929
RI ED I GF PA++ ESPVTARLL+ ST++ LTGNEGQVISELR+V+GADIQ+LHGE
Sbjct: 347 RIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGE 406
Query: 928 PVPNGASDNDVVVQITGGYTCVQNALYKITCRIRDNLFPNEVHAEARMKSSFHGNKDTIK 749
P+PN ASDNDVVVQITGGY CV+NAL KIT IRDN NE+ AEA++K SF NKDT++
Sbjct: 407 PIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNELLAEAKIKPSFPLNKDTVR 465
Query: 748 GKLFGHGKSTFPSGRFPPQNAGV-PTETISENGELLTNSSENLEHGRGNMLATVTNTTVE 572
K KS+FP R PPQNAGV + ++ENGE TN EN+E GRGN++ATVTNTTVE
Sbjct: 466 SKFITRKKSSFPFARVPPQNAGVYQAKKVTENGESHTNLIENVEPGRGNIVATVTNTTVE 525
Query: 571 IVVSEHVFGSVYGEDGGNVDRIRQISGASVTVYDP-CVGTSGGKVVISGTPDQTFAAQSL 395
I+VSEHVFGSVYGEDGGN+DRIRQISGA VTV+DP GTSGGKVVISGTPDQTFAAQSL
Sbjct: 526 IIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISGTPDQTFAAQSL 585
Query: 394 LQAFIQTGQVS 362
LQAFIQT Q S
Sbjct: 586 LQAFIQTAQAS 596
>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 419 bits (1078), Expect = e-114
Identities = 269/638 (42%), Positives = 372/638 (58%), Gaps = 33/638 (5%)
Frame = -1
Query: 2185 MQDPTSAAVETDRHQHHHKHPPPAMRNNRTKRPVFKVLPGQIAFRLVCHAXXXXXXXXXX 2006
M DP A + K PPP + V G +AFRL+CHA
Sbjct: 20 MPDPIPMAYAPNGSSKRSKPPPPPI----------PVPAGHVAFRLLCHASRIGGVIGKS 69
Query: 2005 XXXXSQLRRETGCKIHCEDSVATTEDRVILVIGSLSPRKGLALGGDGE-VDVSSPQEAAV 1829
QL+ +TG +I EDS +T++ RVILVI S + +AL G E V+ S+ QEA +
Sbjct: 70 GVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVL 129
Query: 1828 RVFERVWELEAEKGVNNPNRGTINGEVVCKLLAHTSQIGAVVGKGGKNITTIRNNSGAKI 1649
RVFER+ E+ A P G V C+LLA TSQ+G+V+GKGGK + IR SG+KI
Sbjct: 130 RVFERILEVAAVVDGVPPG-----GVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKI 184
Query: 1648 RVCPP---PHCAAKDEELVLITGEIMAVKKALIAVSHCLQDCPPLGKAXXXXXXXXXXXX 1478
+V P CAA +E+V I G+++AVKKAL+AVS LQDCP + K
Sbjct: 185 KVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVP 244
Query: 1477 XXXXXXPQVELFPHLNSWLPSMENLTLNDASKR---TTNSNGTPSFDSNGTERQVVFRLL 1307
P+V+LF S LP + + T++ AS + N+ + D ++++V+F++L
Sbjct: 245 QQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKIL 304
Query: 1306 CSNNIAGSVIGKRGAIVRALESKTGASIIFAAPLSKFEERVVTISASENLESSYSPAQDA 1127
CSN+ G VIGK G IV+AL+++ GASI AP+++ +ER++TI+ASEN ES YSPAQ+
Sbjct: 305 CSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNG 364
Query: 1126 VILVFARIIEDQIGKGFLPASSAESPVTARLLVAPSTINRLTGNEGQVISELREVTGADI 947
VILVF R IE I KG L + S SPV+ARL+V + + L G G +ISE+R+ +GA I
Sbjct: 365 VILVFNRSIEAGIEKG-LDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGI 423
Query: 946 QILHGEPVPNGASDNDVVVQITGGYTCVQNALYKITCRIRDNLFPNEVHAEARMKSSFHG 767
+I+ + VP AS+ND VVQI+G + VQ+ LY IT R+RDNLFP++ A ++SS
Sbjct: 424 RIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAM 483
Query: 766 NKDTIKGKL-----FGHGKSTFPSGRF---------------------PPQNAGVPTETI 665
N+ + G++ FG S S F P P++T+
Sbjct: 484 NEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTV 543
Query: 664 SENGELLTNSSENLEHGRGNMLATVTNTTVEIVVSEHVFGSVYGEDGGNVDRIRQISGAS 485
+ G N +E G G+ A +TNTTVEIV+ E+V GSVYGE+G N+ R+R+ISGA
Sbjct: 544 T--GVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAK 601
Query: 484 VTVYDPCVGTSGGKVVISGTPDQTFAAQSLLQAFIQTG 371
VT+++P GTS V+ISGTPD+T AAQSLLQAFI TG
Sbjct: 602 VTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 639
>ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 591
Score = 368 bits (944), Expect = 5e-99
Identities = 237/582 (40%), Positives = 335/582 (57%), Gaps = 18/582 (3%)
Frame = -1
Query: 2062 IAFRLVCHAXXXXXXXXXXXXXXSQLRRETGCKIHCEDSVATTEDRVILVIGSLSPRKGL 1883
+ FRL+CHA L+ TG KI ED+ + DRVILV
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAP------- 77
Query: 1882 ALGGDGEVDVSSPQEAAVRVFERVWELEAEKGVNNPNRGTINGE--VVCKLLAHTSQIGA 1709
A DGEV S+ Q A ++VF+RV ++ AE GT G+ V C+LLA TSQ+GA
Sbjct: 78 AAASDGEV--STAQVALLKVFDRVLDVAAETA------GTEVGDRVVSCRLLADTSQVGA 129
Query: 1708 VVGKGGKNITTIRNNSGAKIRVCPP--PHCAAKDEELVLITGEIMAVKKALIAVSHCLQD 1535
V+GK GK + IR ++G KIRV P C A +E+V + G++ +VKKAL+AVS CLQD
Sbjct: 130 VIGKAGKVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQD 189
Query: 1534 CPPLGKAXXXXXXXXXXXXXXXXXXPQVELFPHLNSWLPSMENLTLNDASKRTT-NSNGT 1358
CPP + +E +L+ + TL+ S R+ N++G
Sbjct: 190 CPPPDRT-KMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGA 248
Query: 1357 P----------SFDSNGTERQVVFRLLCSNNIAGSVIGKRGAIVRALESKTGASIIFAAP 1208
P + D +++V FR++CSN+ G+VIGK G+IVRAL++++GA I F
Sbjct: 249 PKLSAEVNRVSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPS 308
Query: 1207 LSKFEERVVTISASE-NLESSYSPAQDAVILVFARIIEDQIGKGFLPASSAESPVTARLL 1031
L + E+R+VTI+ASE N ES YSPAQ AV+LVF++ +E + KG S ES VTA+L+
Sbjct: 309 LVECEDRLVTITASEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLV 368
Query: 1030 VAPSTINRLTGNEGQVISELREVTGADIQILHGEPVPNGASDNDVVVQITGGYTCVQNAL 851
V + + L G G ++SE+R+ TGA+I+++ + VP SDND +VQI+G ++ VQ A+
Sbjct: 369 VPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAI 428
Query: 850 YKITCRIRDNLFPNEVHA--EARMKSSFHGNKDTIKGKLFGHGKSTFPSGRFPPQNAGVP 677
Y T R+RDNLF + ++ + S G K T+ L + + P + P AG+
Sbjct: 429 YNATGRLRDNLFVSTQNSGGARSLSSVLSGGKPTVAVSL-SLNRHSLPGLQAPQTVAGIN 487
Query: 676 TETISENGELLTNSSENLEHGRGNMLATVTNTTVEIVVSEHVFGSVYGEDGGNVDRIRQI 497
+ + LT+ LE G+ A VTNTTV+I V + V GSVYGE+G N+ R+RQI
Sbjct: 488 SRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGSNLARLRQI 547
Query: 496 SGASVTVYDPCVGTSGGKVVISGTPDQTFAAQSLLQAFIQTG 371
SGA V V++P GTS ++ISGTPD+T AAQSLLQAFI G
Sbjct: 548 SGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFILAG 589