BLASTX nr result

ID: Glycyrrhiza24_contig00010006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010006
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36551.1| unknown [Medicago truncatula]                          152   2e-35
ref|XP_003611145.1| F-box family protein [Medicago truncatula] g...   149   2e-34
ref|XP_003611144.1| F-box family protein [Medicago truncatula] g...   149   2e-34
ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glyci...   145   3e-33
ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glyci...   142   4e-32

>gb|AFK36551.1| unknown [Medicago truncatula]
          Length = 159

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/119 (66%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
 Frame = -2

Query: 368 SVLSIAFAS-S*IMGIRFSSSRPQPNTPATTPGPTLGVLPECCVALILGYVDPPQICQLA 192
           S+++I F S S  MGIRFSS R      +   G TLG LPE CVA I+GY+DPPQICQLA
Sbjct: 6   SIITIQFQSQSSTMGIRFSSFR------SNLTGSTLGELPESCVASIIGYMDPPQICQLA 59

Query: 191 TLNRTFRAASSVDFVWESKLPTNYDVLVNKIFNNFPANLGKREIYATLCHLNTLDGGTK 15
           TLNR FRAASS DFVWESKLP NY +L+ KIF++FP NLGKR+IYA+LC LNT+D GTK
Sbjct: 60  TLNRAFRAASSADFVWESKLPPNYHLLLAKIFHHFPINLGKRDIYASLCRLNTIDDGTK 118


>ref|XP_003611145.1| F-box family protein [Medicago truncatula]
           gi|355512480|gb|AES94103.1| F-box family protein
           [Medicago truncatula]
          Length = 141

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/106 (69%), Positives = 84/106 (79%)
 Frame = -2

Query: 332 MGIRFSSSRPQPNTPATTPGPTLGVLPECCVALILGYVDPPQICQLATLNRTFRAASSVD 153
           MGIRFSS R      +   G TLG LPE CVA I+GY+DPPQICQLATLNR FRAASS D
Sbjct: 1   MGIRFSSFR------SNLTGSTLGELPESCVASIIGYMDPPQICQLATLNRAFRAASSAD 54

Query: 152 FVWESKLPTNYDVLVNKIFNNFPANLGKREIYATLCHLNTLDGGTK 15
           FVWESKLP NY +L+ KIF++FP NLGKR+IYA+LC LNT+D GTK
Sbjct: 55  FVWESKLPPNYHLLLAKIFHHFPINLGKRDIYASLCRLNTIDDGTK 100


>ref|XP_003611144.1| F-box family protein [Medicago truncatula]
           gi|355512479|gb|AES94102.1| F-box family protein
           [Medicago truncatula]
          Length = 283

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/106 (69%), Positives = 84/106 (79%)
 Frame = -2

Query: 332 MGIRFSSSRPQPNTPATTPGPTLGVLPECCVALILGYVDPPQICQLATLNRTFRAASSVD 153
           MGIRFSS R      +   G TLG LPE CVA I+GY+DPPQICQLATLNR FRAASS D
Sbjct: 1   MGIRFSSFR------SNLTGSTLGELPESCVASIIGYMDPPQICQLATLNRAFRAASSAD 54

Query: 152 FVWESKLPTNYDVLVNKIFNNFPANLGKREIYATLCHLNTLDGGTK 15
           FVWESKLP NY +L+ KIF++FP NLGKR+IYA+LC LNT+D GTK
Sbjct: 55  FVWESKLPPNYHLLLAKIFHHFPINLGKRDIYASLCRLNTIDDGTK 100


>ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
          Length = 286

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/106 (66%), Positives = 85/106 (80%)
 Frame = -2

Query: 332 MGIRFSSSRPQPNTPATTPGPTLGVLPECCVALILGYVDPPQICQLATLNRTFRAASSVD 153
           MGIRFSSS+  P+   ++P  +LG LPE CVA I+ Y+DPPQIC+LATLNR FR ASS D
Sbjct: 1   MGIRFSSSQAAPSE--SSPASSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSAD 58

Query: 152 FVWESKLPTNYDVLVNKIFNNFPANLGKREIYATLCHLNTLDGGTK 15
           FVWESKLP NYDVL+ +IF +FP++LGKR IYA LC LN+LD GTK
Sbjct: 59  FVWESKLPPNYDVLLRRIFADFPSHLGKRGIYARLCRLNSLDDGTK 104


>ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
          Length = 287

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/106 (65%), Positives = 83/106 (78%)
 Frame = -2

Query: 332 MGIRFSSSRPQPNTPATTPGPTLGVLPECCVALILGYVDPPQICQLATLNRTFRAASSVD 153
           MG+RFSSS    +  A+ P  +LG LPE CVA I+ Y+DPPQIC+LATLNR FR ASS D
Sbjct: 1   MGLRFSSSEAAASESAS-PSSSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSAD 59

Query: 152 FVWESKLPTNYDVLVNKIFNNFPANLGKREIYATLCHLNTLDGGTK 15
           FVWESKLP NYD+L+ +IF +FP++LGKR IYA LC LN+LD GTK
Sbjct: 60  FVWESKLPPNYDILLRRIFADFPSHLGKRGIYARLCRLNSLDDGTK 105


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