BLASTX nr result

ID: Glycyrrhiza24_contig00010004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00010004
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR...   415   e-114
ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PAR...   405   e-111
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   286   3e-75
emb|CBI39748.3| unnamed protein product [Vitis vinifera]              283   3e-74
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   265   7e-69

>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 718

 Score =  415 bits (1066), Expect = e-114
 Identities = 211/256 (82%), Positives = 230/256 (89%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2    IFAQLCRDLGVDFKLHESSKQLALNERLQKYVNHLYLSWMHGDIIDLNTGYKVADSSPSY 181
            IFAQLC DLG+DFKL +SS QLALNE+LQKYVN LYLSW+HGDIIDLNTG KVADSSPS+
Sbjct: 463  IFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSH 522

Query: 182  SLKRRYPNILFENIVIIWGFPSKLKASEVRECMSKVFGPTSVVSVYHLDATAAFVQFSKT 361
            SLK+RYP ILFENIVIIWGFPSKLKA+EVREC+SK FGPTSVVSV+HLDATAAFVQFSKT
Sbjct: 523  SLKKRYPTILFENIVIIWGFPSKLKANEVRECISKAFGPTSVVSVFHLDATAAFVQFSKT 582

Query: 362  DLVSDFLLLKDTLERSDGPISVLHPLAKLLEGGNTCAANYDTYKEICGSPLSEGLFADQA 541
            +LVSDFLL+KD+LERSDG ISVLHPL+KLLEGGNTCAANYDTY EICGSPLSEGLFADQA
Sbjct: 583  ELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYNEICGSPLSEGLFADQA 642

Query: 542  NAIGIKWKTKLTEYRVALGSEVLENPSVQDN-VNTAMEFVEETKPNTIDQLRNAQSRGQA 718
              +GIKWKTKLTE +VA   E  ENPS+Q N VNTAM+ VE+TKPNTIDQL NA SRGQ 
Sbjct: 643  KKVGIKWKTKLTECKVASRGEEHENPSLQANDVNTAMKNVEKTKPNTIDQLGNASSRGQV 702

Query: 719  SSFEIEDSC-AAEANL 763
            S+FEIEDS   AEANL
Sbjct: 703  STFEIEDSSRVAEANL 718


>ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 714

 Score =  405 bits (1040), Expect = e-111
 Identities = 205/254 (80%), Positives = 224/254 (88%)
 Frame = +2

Query: 2    IFAQLCRDLGVDFKLHESSKQLALNERLQKYVNHLYLSWMHGDIIDLNTGYKVADSSPSY 181
            IFAQLC DLG+DFKLH+SSK LALNE+LQKYVN LYLSWMH DIIDLNTG KVADSS   
Sbjct: 462  IFAQLCSDLGIDFKLHDSSKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLR- 520

Query: 182  SLKRRYPNILFENIVIIWGFPSKLKASEVRECMSKVFGPTSVVSVYHLDATAAFVQFSKT 361
            SL +RYP I+FENIVIIWGF SKLKA+E+REC+SKVFGPTSVVSV+HLDATAAFVQFSKT
Sbjct: 521  SLTKRYPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKT 580

Query: 362  DLVSDFLLLKDTLERSDGPISVLHPLAKLLEGGNTCAANYDTYKEICGSPLSEGLFADQA 541
            +LVSDFLL+KD+LERS G ISVLHPL+KLLEGGNTC ANYDTY+EICGS LSEGLFADQA
Sbjct: 581  ELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQA 640

Query: 542  NAIGIKWKTKLTEYRVALGSEVLENPSVQDNVNTAMEFVEETKPNTIDQLRNAQSRGQAS 721
             A+GIKWKTKLTEY+VA   +  ENPSVQDNVNT M+ VE TKPNTIDQL NA S GQ S
Sbjct: 641  EAVGIKWKTKLTEYKVASRGKEHENPSVQDNVNTVMKNVERTKPNTIDQLGNAPSCGQVS 700

Query: 722  SFEIEDSCAAEANL 763
            +FEIEDS  AEANL
Sbjct: 701  TFEIEDSYVAEANL 714


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  286 bits (733), Expect = 3e-75
 Identities = 141/251 (56%), Positives = 188/251 (74%), Gaps = 1/251 (0%)
 Frame = +2

Query: 2    IFAQLCRDLGVDFKLHESSKQLALNERLQKYVNHLYLSWMHGDIIDLNTGYKVADSSPSY 181
            +FAQ C +LG+DFK H SS  LA N+ LQK+VNHLY SW++GDIIDL TG ++A ++  Y
Sbjct: 470  VFAQACSNLGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLGTGNRIAATTVCY 529

Query: 182  SLKRRYPNILFENIVIIWGFPSKLKASEVRECMSKVFGPTSVVSVYHLDATAAFVQFSKT 361
            +LKRRYP ILF NIVI+WGFPS+L + ++REC+SK FGP SV ++YHLD TA FVQFSK 
Sbjct: 530  NLKRRYPKILFSNIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKP 589

Query: 362  DLVSDFLLLKDTLERSDGPISVLHPLAKLLEGGNTCAANYDTYKEICGSPLSEGLFADQA 541
            +LV+DFL+LK+TLE    PISVLHPL+ LLEGGNTCAA+Y+TYKEIC SP+S+ +FADQA
Sbjct: 590  ELVADFLVLKETLETIQDPISVLHPLSVLLEGGNTCAASYETYKEICSSPISKVMFADQA 649

Query: 542  NAIGIKWKTKLTEYRVALGSEVLENPSVQDN-VNTAMEFVEETKPNTIDQLRNAQSRGQA 718
             A+GIKWKTKL E +  + ++  E+ S ++   + A +  +++K   I+ + +  S  + 
Sbjct: 650  KAVGIKWKTKLIESKEKVKTQEDESFSKENGATDAASDPADKSKTRKIEDVIDNLSDDRI 709

Query: 719  SSFEIEDSCAA 751
            S  EI DS  A
Sbjct: 710  SGSEIIDSLYA 720


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  283 bits (725), Expect = 3e-74
 Identities = 137/243 (56%), Positives = 185/243 (76%), Gaps = 1/243 (0%)
 Frame = +2

Query: 2    IFAQLCRDLGVDFKLHESSKQLALNERLQKYVNHLYLSWMHGDIIDLNTGYKVADSSPSY 181
            +FAQ C +LG+DFK H SS  LA N+ LQK+VNHLY SW++GDIIDL TG ++A ++  Y
Sbjct: 470  VFAQACSNLGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLGTGNRIAATTVCY 529

Query: 182  SLKRRYPNILFENIVIIWGFPSKLKASEVRECMSKVFGPTSVVSVYHLDATAAFVQFSKT 361
            +LKRRYP ILF NIVI+WGFPS+L + ++REC+SK FGP SV ++YHLD TA FVQFSK 
Sbjct: 530  NLKRRYPKILFSNIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKP 589

Query: 362  DLVSDFLLLKDTLERSDGPISVLHPLAKLLEGGNTCAANYDTYKEICGSPLSEGLFADQA 541
            +LV+DFL+LK+TLE    PISVLHPL+ LLEGGNTCAA+Y+TYKEIC SP+S+ +FADQA
Sbjct: 590  ELVADFLVLKETLETIQDPISVLHPLSVLLEGGNTCAASYETYKEICSSPISKVMFADQA 649

Query: 542  NAIGIKWKTKLTEYRVALGSEVLENPSVQDN-VNTAMEFVEETKPNTIDQLRNAQSRGQA 718
             A+GIKWKTKL E +  + ++  E+ S ++   + A +  +++K   I+ + +  S  + 
Sbjct: 650  KAVGIKWKTKLIESKEKVKTQEDESFSKENGATDAASDPADKSKTRKIEDVIDNLSDDRI 709

Query: 719  SSF 727
            S+F
Sbjct: 710  SAF 712


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
            predicted protein [Populus trichocarpa]
          Length = 675

 Score =  265 bits (678), Expect = 7e-69
 Identities = 130/221 (58%), Positives = 169/221 (76%)
 Frame = +2

Query: 2    IFAQLCRDLGVDFKLHESSKQLALNERLQKYVNHLYLSWMHGDIIDLNTGYKVADSSPSY 181
            +FAQ C  LG+DFKL+  S+ LA NERLQK+ N LYLSW++GDIIDL+TG++ A+S    
Sbjct: 454  VFAQACNLLGIDFKLYSPSENLACNERLQKHANLLYLSWINGDIIDLSTGHRTAESLRCR 513

Query: 182  SLKRRYPNILFENIVIIWGFPSKLKASEVRECMSKVFGPTSVVSVYHLDATAAFVQFSKT 361
             LK+    ILFENIV+IWGFPSKLK + +++ +SKVFGPTSV S+  LD TA FVQFSK 
Sbjct: 514  DLKKSQTGILFENIVLIWGFPSKLKTAVIKDRISKVFGPTSVTSICRLDETAVFVQFSKL 573

Query: 362  DLVSDFLLLKDTLERSDGPISVLHPLAKLLEGGNTCAANYDTYKEICGSPLSEGLFADQA 541
             LV+DFL++K+TLERS+   SVLHPL+ +LEGGNTCAA+Y+TYK+IC SP S+ LFADQA
Sbjct: 574  KLVADFLVVKETLERSNDAFSVLHPLSTILEGGNTCAASYETYKDICSSPTSKLLFADQA 633

Query: 542  NAIGIKWKTKLTEYRVALGSEVLENPSVQDNVNTAMEFVEE 664
             A+GI+WKTKL E +  L +E  +N   ++  NT   +VE+
Sbjct: 634  EAVGIRWKTKLVERKEELETEEQDNFHEENAANTISVYVEQ 674


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