BLASTX nr result

ID: Glycyrrhiza24_contig00009991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009991
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatu...   233   3e-59
ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycin...   232   7e-59
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   231   1e-58
gb|AFK48588.1| unknown [Lotus japonicus]                              228   8e-58
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56

>ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatula]
           gi|355518385|gb|AET00009.1| 50S ribosomal protein L20
           [Medicago truncatula] gi|388499506|gb|AFK37819.1|
           unknown [Medicago truncatula]
          Length = 121

 Score =  233 bits (594), Expect = 3e-59
 Identities = 113/115 (98%), Positives = 115/115 (100%)
 Frame = -3

Query: 646 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 467
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTR+
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRI 60

Query: 466 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 302
           HGVNYGNFMHGL+KENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP
Sbjct: 61  HGVNYGNFMHGLLKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 115


>ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycine max]
           gi|255632234|gb|ACU16475.1| unknown [Glycine max]
          Length = 121

 Score =  232 bits (591), Expect = 7e-59
 Identities = 112/115 (97%), Positives = 114/115 (99%)
 Frame = -3

Query: 646 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 467
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRN KRDMRSLWIQRINAGTR+
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNNKRDMRSLWIQRINAGTRI 60

Query: 466 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 302
           HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVV+P
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVIP 115


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  231 bits (590), Expect = 1e-58
 Identities = 112/115 (97%), Positives = 114/115 (99%)
 Frame = -3

Query: 646 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 467
           MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 60

Query: 466 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 302
           HGVNYGNFMHGLMKEN+QLNRKVLSEISMHEPYSFK+LVDISRNAFPGNKNVV P
Sbjct: 61  HGVNYGNFMHGLMKENVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFP 115


>gb|AFK48588.1| unknown [Lotus japonicus]
          Length = 121

 Score =  228 bits (582), Expect = 8e-58
 Identities = 108/115 (93%), Positives = 114/115 (99%)
 Frame = -3

Query: 646 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 467
           MNKDKIFKLAKGFRGRAKNCIR+ARERVEKALQYSYRDRRNKKRDMR LWIQRINAGTRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRVARERVEKALQYSYRDRRNKKRDMRGLWIQRINAGTRL 60

Query: 466 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 302
           HGVNYGNFMHGL+KENIQLNRKVLSE+SMHEPY+FKSLVDISRN+FPGNKNVV+P
Sbjct: 61  HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYTFKSLVDISRNSFPGNKNVVIP 115


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  224 bits (572), Expect = 1e-56
 Identities = 110/115 (95%), Positives = 112/115 (97%)
 Frame = -3

Query: 646 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 467
           MNK +IFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTR 
Sbjct: 1   MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60

Query: 466 HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVP 302
           HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFK+LVDISRNAFPGNKNVV P
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHP 115


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