BLASTX nr result

ID: Glycyrrhiza24_contig00009966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009966
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein lig...   264   1e-68
ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein lig...   260   2e-67
ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein lig...   258   1e-66
ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein lig...   246   3e-63
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   233   4e-59

>ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 433

 Score =  264 bits (675), Expect = 1e-68
 Identities = 138/208 (66%), Positives = 155/208 (74%), Gaps = 2/208 (0%)
 Frame = +2

Query: 137 MPAQKRSYEAIKEEED--AQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXXFVVIKL 310
           MPAQKRS+     +    A+  + E+   E+D  +SD S               +V ++L
Sbjct: 1   MPAQKRSFPDAPNDHHRHAKYHHQEEEEEEEDNYKSDDSPPEDKSE--------YVFVEL 52

Query: 311 SDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 490
            +I KEVQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD
Sbjct: 53  LEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 112

Query: 491 DPNYDALIAALYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKVVQRQSEALVKRRKDTPG 670
           DPNYDALIAALYP+I              KNRNKQIQASIAKV QRQSEALVKRR+DTPG
Sbjct: 113 DPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAKVAQRQSEALVKRRRDTPG 172

Query: 671 AFVTRSQRNQRNIHSRRQNQVIDIQGSE 754
           +FVTRSQRNQ+N+ SRRQNQVID QGSE
Sbjct: 173 SFVTRSQRNQQNVLSRRQNQVIDNQGSE 200


>ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 455

 Score =  260 bits (664), Expect = 2e-67
 Identities = 138/222 (62%), Positives = 156/222 (70%), Gaps = 16/222 (7%)
 Frame = +2

Query: 137 MPAQKRSY----------------EAIKEEEDAQIINPEQPAAEDDGVESDGSHSSSNXX 268
           M AQKRS+                EA  EEE+ +     Q   + D  E +  ++  +  
Sbjct: 1   MAAQKRSFPDAPNDNNRHAKHHHEEAKTEEEEEEEEEEAQQQQQHDEEEEEEDNNYKSDD 60

Query: 269 XXXXXXXXFVVIKLSDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECP 448
                   +V ++L +I KEVQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECP
Sbjct: 61  SPPEDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECP 120

Query: 449 ACRTHCASRRSLRDDPNYDALIAALYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKVVQR 628
           ACRTHCASRRSLRDDPNYDALIAALYP+I              KNRNKQIQASIAKVVQR
Sbjct: 121 ACRTHCASRRSLRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQR 180

Query: 629 QSEALVKRRKDTPGAFVTRSQRNQRNIHSRRQNQVIDIQGSE 754
           QSEALVKRR+DTPG+FVTRSQRNQRN+ SRRQNQ +D QGSE
Sbjct: 181 QSEALVKRRRDTPGSFVTRSQRNQRNVLSRRQNQGMDNQGSE 222


>ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 500

 Score =  258 bits (658), Expect = 1e-66
 Identities = 133/198 (67%), Positives = 146/198 (73%)
 Frame = +2

Query: 161 EAIKEEEDAQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXXFVVIKLSDIHKEVQCP 340
           E  ++EE+ +    E+ A  D+  +     S             FV ++L +I K+VQCP
Sbjct: 64  EGEEDEEEEEEEEVEEAAQHDNNDKEKPQDSDETPSSGSEEKPEFVYVELLEIRKDVQCP 123

Query: 341 ICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA 520
           ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA
Sbjct: 124 ICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA 183

Query: 521 LYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRSQRNQ 700
           LYPDI              KNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTR QRNQ
Sbjct: 184 LYPDIEKYEQEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRPQRNQ 243

Query: 701 RNIHSRRQNQVIDIQGSE 754
           RNIHSRRQ Q   I+GSE
Sbjct: 244 RNIHSRRQTQA--IEGSE 259


>ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 501

 Score =  246 bits (629), Expect = 3e-63
 Identities = 131/198 (66%), Positives = 143/198 (72%)
 Frame = +2

Query: 161 EAIKEEEDAQIINPEQPAAEDDGVESDGSHSSSNXXXXXXXXXXFVVIKLSDIHKEVQCP 340
           E  +EEE+ +    E+ A  D+  E     S             FV ++L +I K+VQCP
Sbjct: 67  EEEEEEEEEEEEEVEEAAQNDNNDEEKPQDSDDIPSSGSEEKPEFVYVELLEIRKDVQCP 126

Query: 341 ICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA 520
           ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI+A
Sbjct: 127 ICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISA 186

Query: 521 LYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRSQRNQ 700
           LYPDI              KNRNKQIQASIAKVVQRQSEALVKRRKDTPG FVTRSQRNQ
Sbjct: 187 LYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGTFVTRSQRNQ 246

Query: 701 RNIHSRRQNQVIDIQGSE 754
           RN   RRQ Q   I+GSE
Sbjct: 247 RN---RRQTQA--IEGSE 259


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  233 bits (593), Expect = 4e-59
 Identities = 128/225 (56%), Positives = 149/225 (66%), Gaps = 19/225 (8%)
 Frame = +2

Query: 137 MPAQKRSYEAIKEEEDA--------------QIINPEQPAAEDDGVESDGSHSSSNXXXX 274
           MPAQKRSYE +++E+DA              Q   P     +D GVESD S  SSN    
Sbjct: 1   MPAQKRSYETLQKEDDALLRQQQDHTNNNHEQKQEPRSDIDDDGGVESDRSQPSSNINED 60

Query: 275 XXXXXXFVVIKLSDIHKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 454
                 +VV+KLS+I KEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC
Sbjct: 61  VKEE--YVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC 118

Query: 455 RTHCASRRSLRDDPNYDALIAALYPDIXXXXXXXXXXXXXXKNRNKQIQASIAKVVQRQS 634
           RTHCASRRSLRDDPNYDALIAALYPDI              K RNK+IQA+IA+   RQ+
Sbjct: 119 RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQA 178

Query: 635 EALVKRR---KDTPGAFVTRSQRNQRNIHS--RRQNQVIDIQGSE 754
           EAL ++R   K T   F  R+    R+ HS  RR  ++ ++QGS+
Sbjct: 179 EALSRKRSTAKATAAVFARRTPSRFRDAHSRGRRNYRIAELQGSD 223


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