BLASTX nr result

ID: Glycyrrhiza24_contig00009952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009952
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67...   243   8e-62
ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
ref|XP_003601804.1| F-box family protein [Medicago truncatula] g...   210   4e-52
ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   208   2e-51
ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67...   204   4e-50

>ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 385

 Score =  243 bits (619), Expect = 8e-62
 Identities = 121/169 (71%), Positives = 134/169 (79%)
 Frame = -2

Query: 508 MLGFVVGKKRFTESNMCFTSLVNQDKSARSQSNCCLSLASEAXXXXXXXXXXXXXXDVAK 329
           M GF VGKKRF + NMCFT+L+NQDKS  SQ+N CL    EA              DVA+
Sbjct: 1   MPGFTVGKKRFIQPNMCFTNLINQDKSTLSQNNHCLF--PEALNKDYSPILPGLPDDVAE 58

Query: 328 YCLALVPRSNFPAMGGVCKRWRLFMQSKEFVTVRKLAGVLEEWLYFLTMDSQGKESHWEV 149
           YCLALVPRSNFPAMGGVCK WR F+QSKEF TVRKLAG+LEEWLYFLT D +GKES+WEV
Sbjct: 59  YCLALVPRSNFPAMGGVCKIWRSFIQSKEFATVRKLAGMLEEWLYFLTTDCEGKESYWEV 118

Query: 148 MDCRGHKCQCLPPMPGQGKAGFGVVVLNGKLLIIAGYSIIEGTAIASAE 2
           MDC GHKC+ LPPMPG GKAGF VVVLNGKLL++AGYS+IEGTA ASAE
Sbjct: 119 MDCLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAE 167


>ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|222835654|gb|EEE74089.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  211 bits (536), Expect = 3e-52
 Identities = 105/169 (62%), Positives = 126/169 (74%)
 Frame = -2

Query: 508 MLGFVVGKKRFTESNMCFTSLVNQDKSARSQSNCCLSLASEAXXXXXXXXXXXXXXDVAK 329
           MLG V GKKRFTE+NM F++L+ QD  ++ +      LAS+               DVAK
Sbjct: 1   MLGIVSGKKRFTEANMTFSTLITQDFKSKPR------LASQIPNDIDSPILPGLPDDVAK 54

Query: 328 YCLALVPRSNFPAMGGVCKRWRLFMQSKEFVTVRKLAGVLEEWLYFLTMDSQGKESHWEV 149
           YCLALVPRS+FP MG VCK+WR F++SKE +T+RKLAG+LEEWLY LTMDS+ KESHWEV
Sbjct: 55  YCLALVPRSHFPTMGSVCKKWRSFLKSKELITIRKLAGLLEEWLYVLTMDSEAKESHWEV 114

Query: 148 MDCRGHKCQCLPPMPGQGKAGFGVVVLNGKLLIIAGYSIIEGTAIASAE 2
            DC GHK Q LPPMPG  KA FGVVVLNGKLL++AGYS+I+GT  ASA+
Sbjct: 115 FDCLGHKHQLLPPMPGPVKAEFGVVVLNGKLLVMAGYSVIDGTGSASAD 163


>ref|XP_003601804.1| F-box family protein [Medicago truncatula]
           gi|355490852|gb|AES72055.1| F-box family protein
           [Medicago truncatula]
          Length = 372

 Score =  210 bits (535), Expect = 4e-52
 Identities = 108/156 (69%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 MCFTSLVNQDKSA--RSQSNCCLSLASEAXXXXXXXXXXXXXXDVAKYCLALVPRSNFPA 290
           MCFT+LVNQDK+   RS+SN CL++  EA              DVAKYCLALVPRSNFPA
Sbjct: 1   MCFTNLVNQDKTTHTRSKSNHCLTI--EALDKDDSPILPGLPDDVAKYCLALVPRSNFPA 58

Query: 289 MGGVCKRWRLFMQSKEFVTVRKLAGVLEEWLYFLTMDSQGKESHWEVMDCRGHKCQCLPP 110
           MGGV K+WRLF++SKEFV VRKLAG+LEEWLY LT+DS+G+ESHWEVMD  G KC+ LPP
Sbjct: 59  MGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTLDSEGRESHWEVMDSLGRKCRSLPP 118

Query: 109 MPGQGKAGFGVVVLNGKLLIIAGYSIIEGTAIASAE 2
           MPG  KA FGVVVLNGKLLI+AGYS IEGT +AS E
Sbjct: 119 MPGPAKASFGVVVLNGKLLIMAGYSAIEGTVVASDE 154


>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
           gi|297738424|emb|CBI27625.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  208 bits (529), Expect = 2e-51
 Identities = 106/169 (62%), Positives = 125/169 (73%)
 Frame = -2

Query: 508 MLGFVVGKKRFTESNMCFTSLVNQDKSARSQSNCCLSLASEAXXXXXXXXXXXXXXDVAK 329
           M G V GKKRFT+SNMC ++ V QD    S+SN CL+  S+               DVAK
Sbjct: 1   MPGIVAGKKRFTQSNMCLSNSVQQDTLTLSKSNPCLT--SQFADDSYGPILPGLPDDVAK 58

Query: 328 YCLALVPRSNFPAMGGVCKRWRLFMQSKEFVTVRKLAGVLEEWLYFLTMDSQGKESHWEV 149
           YCLALVPRSNFPAMGGV K+WR F++SKEF+TVRKLAG+LEEWLY LTMD++GK SHWEV
Sbjct: 59  YCLALVPRSNFPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEWLYVLTMDAEGKGSHWEV 118

Query: 148 MDCRGHKCQCLPPMPGQGKAGFGVVVLNGKLLIIAGYSIIEGTAIASAE 2
           +DC GHK Q LPPMPG  K GF VVVLNGKLL++AG S++  T  ASA+
Sbjct: 119 LDCLGHKHQLLPPMPGPVKTGFEVVVLNGKLLVMAGCSVVGRTGSASAD 167


>ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 388

 Score =  204 bits (518), Expect = 4e-50
 Identities = 105/170 (61%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
 Frame = -2

Query: 508 MLGFVVGKKRFTESNMCFTSLVNQDKSARSQSNCCL-SLASEAXXXXXXXXXXXXXXDVA 332
           M  FV  KK F E NMCFT+L N D+   +++N  + S A +               DV+
Sbjct: 1   MPSFVAEKKIFVEPNMCFTNLANHDRPTLTKNNHYVRSEALDDDDDGTSPILPGLPDDVS 60

Query: 331 KYCLALVPRSNFPAMGGVCKRWRLFMQSKEFVTVRKLAGVLEEWLYFLTMDSQGKESHWE 152
           K+CLALVPRSNFPAMGGVCKRWR F++SKEF+TVRKLAG+ EEWLY LT  S+GK SHWE
Sbjct: 61  KHCLALVPRSNFPAMGGVCKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWE 120

Query: 151 VMDCRGHKCQCLPPMPGQGKAGFGVVVLNGKLLIIAGYSIIEGTAIASAE 2
           VMDC GH  + LPPMPG  KAGFGVVVLNGKLL++AGYS I+GTA  SAE
Sbjct: 121 VMDCLGHNRRSLPPMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTASVSAE 170


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