BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009946
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   483   e-137
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   471   e-133
ref|XP_003523428.1| PREDICTED: replication factor C subunit 4-li...   471   e-133
gb|AFK40832.1| unknown [Lotus japonicus]                              465   e-132
ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-li...   464   e-131

>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
            gi|357520353|ref|XP_003630465.1| Replication factor C
            subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
            unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
            Replication factor C subunit [Medicago truncatula]
            gi|355524487|gb|AET04941.1| Replication factor C subunit
            [Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
            [Medicago truncatula]
          Length = 339

 Score =  483 bits (1243), Expect(2) = e-137
 Identities = 245/272 (90%), Positives = 256/272 (94%)
 Frame = -3

Query: 1143 FRPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIVLDEADS 964
            F PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTN+ K GYPCPPYKIIVLDEADS
Sbjct: 67   FGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIVLDEADS 126

Query: 963  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 784
            MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL+EEIMSSRI+YI
Sbjct: 127  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSRIVYI 186

Query: 783  CKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXSGVVPEKVVE 604
            CKEEG+YLDAEGLSTLS+ISQGDLRRAITYLQSAARLFG           SG+VP +VVE
Sbjct: 187  CKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIVPAEVVE 246

Query: 603  ALLKACKSGNFDLANKEVNNFVAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 424
            ALLKAC+SGNFDLANKEVNNF+AEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA
Sbjct: 247  ALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 306

Query: 423  DKCLVDGADEYLQLLDVISNTMQALCNMPERF 328
            DKCLVDGADEYLQLLDV+SNT+QALCNMPE F
Sbjct: 307  DKCLVDGADEYLQLLDVVSNTIQALCNMPEGF 338



 Score = 33.5 bits (75), Expect(2) = e-137
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 1181 GKTTTALAIAHQLFG 1137
            GKTTTALAIAHQLFG
Sbjct: 54   GKTTTALAIAHQLFG 68


>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
            max]
          Length = 342

 Score =  471 bits (1212), Expect(2) = e-133
 Identities = 241/274 (87%), Positives = 251/274 (91%)
 Frame = -3

Query: 1143 FRPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIVLDEADS 964
            F PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRK+GYPCPP+KIIVLDEADS
Sbjct: 67   FGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADS 126

Query: 963  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 784
            MTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMSSRILYI
Sbjct: 127  MTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYI 186

Query: 783  CKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXSGVVPEKVVE 604
             +EEGL LDAE LSTLSSIS GDLRRAITYLQSAARLFG           SGVVP KVVE
Sbjct: 187  SQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVE 246

Query: 603  ALLKACKSGNFDLANKEVNNFVAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 424
             LLKACKSGNFDLANKEVNNF+AEGYP SQMLTQLFE+IVE+ND+SDEQKARISKKLGEA
Sbjct: 247  ELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARISKKLGEA 306

Query: 423  DKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 322
            DKCLVDGADEYLQLLDV+SNTM+A  NMPE F Y
Sbjct: 307  DKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 340



 Score = 33.5 bits (75), Expect(2) = e-133
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 1181 GKTTTALAIAHQLFG 1137
            GKTTTALAIAHQLFG
Sbjct: 54   GKTTTALAIAHQLFG 68


>ref|XP_003523428.1| PREDICTED: replication factor C subunit 4-like isoform 2 [Glycine
            max]
          Length = 330

 Score =  471 bits (1212), Expect(2) = e-133
 Identities = 241/274 (87%), Positives = 251/274 (91%)
 Frame = -3

Query: 1143 FRPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIVLDEADS 964
            F PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRK+GYPCPP+KIIVLDEADS
Sbjct: 55   FGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADS 114

Query: 963  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 784
            MTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMSSRILYI
Sbjct: 115  MTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYI 174

Query: 783  CKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXSGVVPEKVVE 604
             +EEGL LDAE LSTLSSIS GDLRRAITYLQSAARLFG           SGVVP KVVE
Sbjct: 175  SQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVE 234

Query: 603  ALLKACKSGNFDLANKEVNNFVAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 424
             LLKACKSGNFDLANKEVNNF+AEGYP SQMLTQLFE+IVE+ND+SDEQKARISKKLGEA
Sbjct: 235  ELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARISKKLGEA 294

Query: 423  DKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 322
            DKCLVDGADEYLQLLDV+SNTM+A  NMPE F Y
Sbjct: 295  DKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 328



 Score = 33.5 bits (75), Expect(2) = e-133
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 1181 GKTTTALAIAHQLFG 1137
            GKTTTALAIAHQLFG
Sbjct: 42   GKTTTALAIAHQLFG 56


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  465 bits (1196), Expect(2) = e-132
 Identities = 238/274 (86%), Positives = 248/274 (90%)
 Frame = -3

Query: 1143 FRPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIVLDEADS 964
            F PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTN +K GYPCPPYKIIVLDEADS
Sbjct: 67   FGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIVLDEADS 126

Query: 963  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 784
            MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI
Sbjct: 127  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 186

Query: 783  CKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXSGVVPEKVVE 604
            C EEGL+LDAEGLSTLSSISQGDLRRAITYLQS+ARLFG           SGVVPE VVE
Sbjct: 187  CNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVVPENVVE 246

Query: 603  ALLKACKSGNFDLANKEVNNFVAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 424
            A+LKACKSGNFDLANKEVNNF+AEGYP SQ+LTQLF+AIVEE   SD+QKARI KKLGEA
Sbjct: 247  AILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARICKKLGEA 306

Query: 423  DKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 322
            DKCLVDGADEYLQLLDVISNT +A C+MPE   Y
Sbjct: 307  DKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSY 340



 Score = 33.5 bits (75), Expect(2) = e-132
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 1181 GKTTTALAIAHQLFG 1137
            GKTTTALAIAHQLFG
Sbjct: 54   GKTTTALAIAHQLFG 68


>ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
            max]
          Length = 342

 Score =  464 bits (1194), Expect(2) = e-131
 Identities = 239/274 (87%), Positives = 249/274 (90%)
 Frame = -3

Query: 1143 FRPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKTGYPCPPYKIIVLDEADS 964
            F PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQ K GYPCPP+KIIVLDEADS
Sbjct: 67   FGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIVLDEADS 126

Query: 963  MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYI 784
            MTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSEEIMSSRILYI
Sbjct: 127  MTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYI 186

Query: 783  CKEEGLYLDAEGLSTLSSISQGDLRRAITYLQSAARLFGXXXXXXXXXXXSGVVPEKVVE 604
             +EEGL LDAE LSTLS IS GDLRRAITYLQSAARLFG           SGVVP KVVE
Sbjct: 187  SQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVE 246

Query: 603  ALLKACKSGNFDLANKEVNNFVAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEA 424
            ALLKACKSGNFDLANKEVNNF+AEGYP SQMLTQLFEAIVEEND+SDEQKARISKKLGEA
Sbjct: 247  ALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEA 306

Query: 423  DKCLVDGADEYLQLLDVISNTMQALCNMPERFVY 322
            DKCLVDGADEYLQLLDV+SNT++A  ++PE F Y
Sbjct: 307  DKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAY 340



 Score = 33.5 bits (75), Expect(2) = e-131
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 1181 GKTTTALAIAHQLFG 1137
            GKTTTALAIAHQLFG
Sbjct: 54   GKTTTALAIAHQLFG 68