BLASTX nr result

ID: Glycyrrhiza24_contig00009945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009945
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   249   1e-66
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   249   1e-63
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   246   9e-63
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      239   1e-60
ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago ...   236   9e-60

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  249 bits (637), Expect(2) = 1e-66
 Identities = 129/337 (38%), Positives = 203/337 (60%), Gaps = 12/337 (3%)
 Frame = -1

Query: 1397 PVNPLQDPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPK 1218
            P +P  DP +P+F+   D P+   V+  L  +NYHSWAR + +AL +K KF+F+DG+IP 
Sbjct: 203  PADPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPM 262

Query: 1217 P-SSFDLSYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXX 1041
            P  +FD S+ AW RCN ++HSWI+NSV P +++ I++ + AS+ W  LK           
Sbjct: 263  PVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRV 322

Query: 1040 XDLQHELHQLKQESLSVTEFFTELSNIWEELDTQCPMPDCTCPVKCTCESMRNARSQREE 861
             ++Q E++ L Q + SVT F+++L  +WEEL+   P+P+CTC  +C+C++MR AR     
Sbjct: 323  SEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHT 382

Query: 860  DYIMRFLKGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPPEESQSLINVA 681
             ++MRFL GLND F  VKSQ LL++ LP+I ++FSMV++ ERQN  +P  ++S++L+N +
Sbjct: 383  LHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNAS 441

Query: 680  DGK-RPYGRGKGNWTNKQ-CTFCGKGGHTVETCYRKHGYPAGYFNRDSKSSAN------- 528
              K +    G+ N  +K+ CT+C K  H VE C++KHG P       S S+ +       
Sbjct: 442  TSKSQGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGE 501

Query: 527  --XXXXXXXXXXXXXXXKAITQEELSQLLDVLKKVNV 423
                              ++TQE+L +LL +++  +V
Sbjct: 502  RVESSTASQNTTSVTMTPSLTQEQLDKLLQLIQPPSV 538



 Score = 32.0 bits (71), Expect(2) = 1e-66
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 328 SQKMIGSGKLKQGLYHLDYGGGPTVSV---VSNISVGTHSHPIPKSILWHY 185
           S KMIG G+ + GLY+L        S    +S+I    ++  IP++ +WH+
Sbjct: 552 SLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHF 602


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  249 bits (637), Expect = 1e-63
 Identities = 129/337 (38%), Positives = 203/337 (60%), Gaps = 12/337 (3%)
 Frame = -1

Query: 1397 PVNPLQDPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPK 1218
            P +P  DP +P+F+   D P+   V+  L  +NYHSWAR + +AL +K KF+F+DG+IP 
Sbjct: 10   PADPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPM 69

Query: 1217 P-SSFDLSYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXX 1041
            P  +FD S+ AW RCN ++HSWI+NSV P +++ I++ + AS+ W  LK           
Sbjct: 70   PVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRV 129

Query: 1040 XDLQHELHQLKQESLSVTEFFTELSNIWEELDTQCPMPDCTCPVKCTCESMRNARSQREE 861
             ++Q E++ L Q + SVT F+++L  +WEEL+   P+P+CTC  +C+C++MR AR     
Sbjct: 130  SEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHT 189

Query: 860  DYIMRFLKGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPPEESQSLINVA 681
             ++MRFL GLND F  VKSQ LL++ LP+I ++FSMV++ ERQN  +P  ++S++L+N +
Sbjct: 190  LHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNAS 248

Query: 680  DGK-RPYGRGKGNWTNKQ-CTFCGKGGHTVETCYRKHGYPAGYFNRDSKSSAN------- 528
              K +    G+ N  +K+ CT+C K  H VE C++KHG P       S S+ +       
Sbjct: 249  TSKSQGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGE 308

Query: 527  --XXXXXXXXXXXXXXXKAITQEELSQLLDVLKKVNV 423
                              ++TQE+L +LL +++  +V
Sbjct: 309  RVESSTASQNTTSVTMTPSLTQEQLDKLLQLIQPPSV 345



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
 Frame = -2

Query: 355 TFLLLLKDHSQKMIGSGKLKQGLYHLDYGGGPTVSV---VSNISVGTHSHPIPKSILWHY 185
           T   + +  S KMIG G+ + GLY+L        S    +S+I    ++  IP++ +WH+
Sbjct: 475 TICSIQEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHF 534

Query: 184 SFGHASHAKLGMMSKFFSDVCSNKDLVCDICHFARQRKLPFSVSTSRASVPFELVHLDVW 5
             GH S +++ ++   F  + ++   VCDICHFA+ RKLPF  S  +A   F+L+H D+W
Sbjct: 535 RLGHLSSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIW 594

Query: 4   G 2
           G
Sbjct: 595 G 595


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 772

 Score =  246 bits (629), Expect = 9e-63
 Identities = 121/277 (43%), Positives = 177/277 (63%), Gaps = 11/277 (3%)
 Frame = -1

Query: 1364 YFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDLSYDAW 1185
            Y++   + P    V+  LT  NY +W R M +AL +KNKF F+DGS+P P   DL+  AW
Sbjct: 19   YYVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDLNRTAW 78

Query: 1184 ERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHELHQLKQ 1005
            ERCN+++ SWI+NSVSPQ+ Q I++ E A + W  L+             L+  ++ LKQ
Sbjct: 79   ERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQ 138

Query: 1004 ESLSVTEFFTELSNIWEELDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFLKGLND 825
               SV ++FT + ++WEEL++  PMP CTCP  C CESMR AR  R ED +++FL GLND
Sbjct: 139  GDKSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLND 198

Query: 824  NFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPP-----EESQSLINVADGKRPYG 660
            +F++VK+Q LL+  LP+I++V+SMV++ E  + +IPP      E+S  L+N +D ++P+ 
Sbjct: 199  SFSVVKTQVLLIDPLPSINKVYSMVIQEE--SNIIPPTSLASNEDSSILVNASDARKPFL 256

Query: 659  RGKGNWT------NKQCTFCGKGGHTVETCYRKHGYP 567
            RGK + T      ++ CTFC +  HTVE CY KH +P
Sbjct: 257  RGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFP 293


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  239 bits (610), Expect = 1e-60
 Identities = 129/366 (35%), Positives = 203/366 (55%), Gaps = 16/366 (4%)
 Frame = -1

Query: 1370 NPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDLSYD 1191
            +PY++   D P+  +++  L  +NY +W R M +AL +KNK  F+DGSI  P   DL+  
Sbjct: 13   SPYYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSISVPDIDDLNRQ 72

Query: 1190 AWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHELHQL 1011
            AWERCN ++HSWIVNSV+  + Q I++ + A  AW+ LK             L+  ++ L
Sbjct: 73   AWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRSTINNL 132

Query: 1010 KQESLSVTEFFTELSNIWEELDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFLKGL 831
            KQ + SV ++F EL  +W+EL++  P+P+CTC   C CES+R A+  R ED I++FL GL
Sbjct: 133  KQGTKSVLDYFIELCTLWDELNSHRPIPNCTCIHPCRCESIRLAKYYRTEDQILQFLTGL 192

Query: 830  NDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPP---EESQSLINVADGKRPYG 660
            ND F++VK+Q LLM  LP I++V+S+V++ E QN +   P   ++S   +N +D ++ Y 
Sbjct: 193  NDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDDSSISVNASDARKFYP 252

Query: 659  RGKGNWT-------NKQCTFCGKGGHTVETCYRKHGYP------AGYFNRDSKSSANXXX 519
            RGKG  +       ++ CTFC +  HT+E CY K+G+P      +   N  S++S     
Sbjct: 253  RGKGTSSTSANKGKDRFCTFCNRYNHTIEFCYLKYGHPNFNKGNSSANNAVSEASDTNNS 312

Query: 518  XXXXXXXXXXXXKAITQEELSQLLDVLKKVNVXXXXXXXXXXXXXAEDHAVNQIHISTAA 339
                         ++TQE+   L+ +L++ N+                   N +H ST +
Sbjct: 313  IGTNDVVAPDSKFSLTQEKYDHLVALLQQANLLSSVSPPTGPIS-------NHVHTSTIS 365

Query: 338  EGPLTE 321
              P T+
Sbjct: 366  SVPDTQ 371


>ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago truncatula]
            gi|355485102|gb|AES66305.1| hypothetical protein
            MTR_2g065630 [Medicago truncatula]
          Length = 475

 Score =  236 bits (603), Expect = 9e-60
 Identities = 113/276 (40%), Positives = 173/276 (62%), Gaps = 5/276 (1%)
 Frame = -1

Query: 1379 DPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDL 1200
            D  + +++   + P   +V+ PL  +NY +W+R M +A  +KNK KF+DGS+  P   DL
Sbjct: 9    DSESVFYVHPIEGPNSVIVAPPLDGSNYLAWSRSMIRAFGAKNKLKFIDGSMEIPDEDDL 68

Query: 1199 SYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHEL 1020
            +  AWERCN ++ SWI+NSVSPQ+ Q +++ E A +AW+                     
Sbjct: 69   NRSAWERCNHLIQSWIINSVSPQIAQTLVFHENAIDAWS--------------------- 107

Query: 1019 HQLKQESLSVTEFFTELSNIWEELDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFL 840
              L++ S +V E+FTE+  +WEEL++  P+P CTCP  C C +MR AR+ R ED +++FL
Sbjct: 108  -DLRERSKTVLEYFTEMKTLWEELNSHRPIPHCTCPHPCRCAAMREARNFRLEDQVIQFL 166

Query: 839  KGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQN-GLIPPPEESQSLINVADGKRPY 663
             GLND F +VK+Q L++  LP+I++V+S+V++ E  N  L  P +E  SL+N A+ ++P 
Sbjct: 167  TGLNDQFNVVKTQVLMLDPLPSINKVYSLVVQEESNNKSLSSPIDEPLSLVNAAESRKPQ 226

Query: 662  GRGKGNWTN----KQCTFCGKGGHTVETCYRKHGYP 567
            GRG+G        + C+FCGK  HT+E CY+KHG+P
Sbjct: 227  GRGRGYSHGFRPPRHCSFCGKSNHTIEFCYQKHGHP 262


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