BLASTX nr result

ID: Glycyrrhiza24_contig00009941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009941
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago tr...   402   e-110
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   382   e-103
ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   379   e-103
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   379   e-103
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   379   e-102

>ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago truncatula]
            gi|355512177|gb|AES93800.1| Cyclic nucleotide gated
            channel [Medicago truncatula]
          Length = 742

 Score =  402 bits (1034), Expect = e-110
 Identities = 204/328 (62%), Positives = 236/328 (71%), Gaps = 4/328 (1%)
 Frame = +2

Query: 2    FRLAYVSPESREAGAGDSVDNPKKIALNYLKGYXXXXXXXXXXXXQIIMWCVLQHSLGST 181
            FRLAYVSPESR  GAGD VD+PKKIA+NY K Y            QI++  +L +SLGS+
Sbjct: 240  FRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFFLDLFVVSPIPQIMIMFILPNSLGSS 299

Query: 182  GANHGKNVLRLGILIQYLPRLFRFLPLVVGLSPTGFIFESAWANVVINLLIFMLSGHVIG 361
            GAN+ KN+LRLGIL+QY+PRLFRFLPL++G SPTGFIFESAWAN +INLLIFMLSGHV+G
Sbjct: 300  GANYAKNLLRLGILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVG 359

Query: 362  SCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFKWSNNAGAIACLNSTSGAFSYG 541
            SCWYLFGLQRVN CLRDAC  +NL  CMELIDC      W N+ GA  CLNS+SG FSYG
Sbjct: 360  SCWYLFGLQRVNQCLRDACRNANLTGCMELIDCN-SNATWRNDKGANDCLNSSSGVFSYG 418

Query: 542  IYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFVSEVVFTMVXXXXXXXXXX 721
            IYANAVP T ET V+ KYVYALFWGFQQIST+AG+Q PS FV EV+FTM           
Sbjct: 419  IYANAVPLTIETRVISKYVYALFWGFQQISTMAGNQVPSYFVWEVLFTMSIIGLGLLLYA 478

Query: 722  XXXXNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXXXXXQAERSNWAATRGVTQ 901
                N+QNFLQ LGRRR++MQLR  DVE+WM              +AER  WAATRGV +
Sbjct: 479  LLIGNIQNFLQALGRRRVEMQLRGRDVEQWMSHRRLPEDLKRRVREAERYTWAATRGVPE 538

Query: 902  ----ETVPEDLQTEIRRHLSKRSQSVSL 973
                E +PEDLQ +IRRHL K  + V +
Sbjct: 539  EMALENLPEDLQKDIRRHLFKFVKKVRI 566


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  382 bits (980), Expect = e-103
 Identities = 197/337 (58%), Positives = 232/337 (68%), Gaps = 13/337 (3%)
 Frame = +2

Query: 2    FRLAYVSPESREAGAGDSVDNPKKIALNYLKGYXXXXXXXXXXXXQIIMWCVLQHSLGST 181
            FRLAYVS ESR  GAGD VD+PK+IAL+YLKGY            QI++  VL +SL   
Sbjct: 264  FRLAYVSRESRVVGAGDLVDHPKRIALHYLKGYFLIDLFVVFPLPQIMILFVLPNSL--E 321

Query: 182  GANHGKNVLRLGILIQYLPRLFRFLPLVVGLSPTGFIFESAWANVVINLLIFMLSGHVIG 361
            GAN+ KN+LR  IL+QY+P+LFRFLPL++G SPTGFIFESAWAN +INLLIFML+ HV+G
Sbjct: 322  GANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVG 381

Query: 362  SCWYLFGLQRVNHCLRDACHRSNLPSCMELIDC---------KLPPFKWSNNAGAIACLN 514
            SCWYLFGLQRVN CLRDACH SN+P CM+ IDC          L   +W NN  A+ACL+
Sbjct: 382  SCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQPSLRSDQWINNTDAVACLD 441

Query: 515  STSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFVSEVVFTMVX 694
             +   FSYGIY NAVP T ETN+V KYVY+LFWGFQQISTLAG+  PS FV EV+FTM  
Sbjct: 442  PSPDGFSYGIYENAVPLTIETNIVNKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAI 501

Query: 695  XXXXXXXXXXXXXNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXXXXXQAERSN 874
                         N+QNFLQ LGRR+L+MQLR  DVE+WM              QAER N
Sbjct: 502  IGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYN 561

Query: 875  WAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 973
            WAATRGV +    E +PEDLQ +IRRHL K  + + L
Sbjct: 562  WAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598


>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 770

 Score =  379 bits (974), Expect = e-103
 Identities = 198/333 (59%), Positives = 228/333 (68%), Gaps = 9/333 (2%)
 Frame = +2

Query: 2    FRLAYVSPESREAGAGDSVDNPKKIALNYLKGYXXXXXXXXXXXXQIIMWCVLQHSLGST 181
            FRLAYVSPESR  GAGD VD+PKKIALNYLKG+            QI++  VL+  +G +
Sbjct: 265  FRLAYVSPESRVVGAGDLVDHPKKIALNYLKGFFFIDLFVVLPLPQIMISFVLRKYMGIS 324

Query: 182  GANHGKNVLRLGILIQYLPRLFRFLPLVVGLSPTGFIFESAWANVVINLLIFMLSGHVIG 361
            GAN  KN+LR  IL+QY PRLFRFLPL++G SPTGFIFESAWAN +INLL FMLSGHV+G
Sbjct: 325  GANFAKNLLRAAILLQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLFFMLSGHVVG 384

Query: 362  SCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFK-----WSNNAGAIACLNSTSG 526
            S WYLFGLQRVN CLR AC  SN+  C   IDC           W+ N  A ACL+S+SG
Sbjct: 385  SGWYLFGLQRVNQCLRKACQHSNITGCSAFIDCGSDRASDQSELWNKNVNATACLDSSSG 444

Query: 527  AFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFVSEVVFTMVXXXXX 706
            AF YGIY +AVP T ET VVKKYV+ALFWGFQQISTLAG+QTPS F  EV+FTM      
Sbjct: 445  AFPYGIYVHAVPLTIETRVVKKYVFALFWGFQQISTLAGNQTPSYFEWEVLFTMAIIGLG 504

Query: 707  XXXXXXXXXNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXXXXXQAERSNWAAT 886
                     N+QNFLQ LGRRRL+MQLR  DVE+WM              QAER +WAAT
Sbjct: 505  LLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAAT 564

Query: 887  RGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 973
            RGV +    E +PEDLQT+IRRHL K  + V +
Sbjct: 565  RGVNEEILLENLPEDLQTDIRRHLFKFVKKVRI 597


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  379 bits (973), Expect = e-103
 Identities = 198/337 (58%), Positives = 232/337 (68%), Gaps = 13/337 (3%)
 Frame = +2

Query: 2    FRLAYVSPESREAGAGDSVDNPKKIALNYLKGYXXXXXXXXXXXXQIIMWCVLQHSLGST 181
            FRLAYVS ESR  GAGD VD+PKKIAL+YLKGY            QI++  VL +SL   
Sbjct: 264  FRLAYVSRESRVVGAGDLVDHPKKIALHYLKGYFLIDLFVVFPLPQIMILFVLPNSL--E 321

Query: 182  GANHGKNVLRLGILIQYLPRLFRFLPLVVGLSPTGFIFESAWANVVINLLIFMLSGHVIG 361
            GAN+ KN+LR  IL+QY+P+LFRFLPL++G SP GFIFESAWAN VINLLIF+L+ HV+G
Sbjct: 322  GANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPMGFIFESAWANFVINLLIFVLASHVVG 381

Query: 362  SCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCK---------LPPFKWSNNAGAIACLN 514
            SCWYLFGLQRVN CLRDACH SN+P CM+ IDC          L   +W NN  A+ACL+
Sbjct: 382  SCWYLFGLQRVNQCLRDACHSSNIPECMKFIDCGRGHGNNQPGLRSDQWINNTQAVACLD 441

Query: 515  STSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFVSEVVFTMVX 694
             +   FSYGIY NAVP T ETNVVKKYVY+LFWGFQQISTLAG+  PS FV EV+FTM  
Sbjct: 442  PSPDGFSYGIYENAVPLTIETNVVKKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAI 501

Query: 695  XXXXXXXXXXXXXNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXXXXXQAERSN 874
                         N+QNFLQ LGRR+L+MQLR  DVE+WM              +AER N
Sbjct: 502  IGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRRAERYN 561

Query: 875  WAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 973
            WAATRGV +    E +PEDLQ +IRRHL K  + + L
Sbjct: 562  WAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 772

 Score =  379 bits (972), Expect = e-102
 Identities = 199/335 (59%), Positives = 227/335 (67%), Gaps = 11/335 (3%)
 Frame = +2

Query: 2    FRLAYVSPESREAGAGDSVDNPKKIALNYLKGYXXXXXXXXXXXXQIIMWCVLQHSLGST 181
            F+LAYVSPES   GAGD VD+PKKIALNYLKGY            QI++  VL   LG +
Sbjct: 265  FKLAYVSPESTVVGAGDLVDHPKKIALNYLKGYFFIDLFVVLPLPQIMILFVLPKYLGLS 324

Query: 182  GANHGKNVLRLGILIQYLPRLFRFLPLVVGLSPTGFIFESAWANVVINLLIFMLSGHVIG 361
            GAN+ KN+LR  IL+QY PRLFRFLPL++G SPTGFIFESAWAN +INLLIFMLSGHV+G
Sbjct: 325  GANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVG 384

Query: 362  SCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFK-------WSNNAGAIACLNST 520
            S WYLFGLQRVN CLR+AC  SN+  C   IDC             W+NN  A ACLNS+
Sbjct: 385  SGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGADDVSGRAEVWNNNVNATACLNSS 444

Query: 521  SGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFVSEVVFTMVXXX 700
            S AF YGIY NAVP T ET VV KYV+ALFWGFQQISTLAG+QTPS FV EV+FTM    
Sbjct: 445  SDAFKYGIYVNAVPLTIETRVVHKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIG 504

Query: 701  XXXXXXXXXXXNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXXXXXQAERSNWA 880
                       N+QNFLQ LGRRRL+MQLR  DVE+WM               AER +WA
Sbjct: 505  LGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRHAERYSWA 564

Query: 881  ATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 973
            ATRGV +    E + EDLQT+IRRHL K  + V +
Sbjct: 565  ATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRI 599


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