BLASTX nr result

ID: Glycyrrhiza24_contig00009929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009929
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   688   0.0  
ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   684   0.0  
ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   532   e-148
ref|XP_002517522.1| ring finger protein, putative [Ricinus commu...   530   e-148
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   480   e-133

>ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 419

 Score =  688 bits (1775), Expect = 0.0
 Identities = 333/419 (79%), Positives = 354/419 (84%)
 Frame = +1

Query: 235  MDVTSLGPTSNNQTDQHPLLMEQPENRNGRHHIIDVTRNEEALSTSSHNDQHSEMHLPQN 414
            MDVTSLG  SN QTDQHPLLMEQPE RNG  H+ID+TRN EAL+TS  NDQHSEMHL QN
Sbjct: 1    MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60

Query: 415  ENQPAGATQDSAHQTXXXXXXXXXXXXXXXXXXGDGYGHRRRSPLNSGLWISVELVVTVS 594
            ++QPAG  QDS+HQT                  GDGYGHR RSPLNSGLWISVELVVTVS
Sbjct: 61   QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120

Query: 595  QIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRXXXXXXXXXXXXXX 774
            QIIASIVVLSLSRNENPQAPLFAW+VGY SGCVATLPILYWRFRNR              
Sbjct: 121  QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSNEQDTSQASQG 180

Query: 775  XXXXXXXXRTYTAIYASHVSDEESGHAAQSAARNAIIPGAFTSRLNGLVDHFKMALDCFF 954
                    R+YT+IY SHVSDEE+GHA QSA+RN I+PGAFTSRLNGLVDHFKMALDCFF
Sbjct: 181  SSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLVDHFKMALDCFF 240

Query: 955  AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 1134
            AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL
Sbjct: 241  AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 300

Query: 1135 GIREDFSQNRGATVECINALPIYKFKLKNNENGDDRDINTALEEGGILAAGTEKERAISG 1314
            GIREDFSQNRGATVE INALPI+KFKLKNNENGDD+D N+A++EGGILAAGTEKER ISG
Sbjct: 301  GIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDANSAIDEGGILAAGTEKERMISG 360

Query: 1315 EDAVCCICLAKYADDDELRELPCSHVFHVGCVDKWLKINASCPLCKSEVGANNEEPPSS 1491
            EDAVCCICLAKYADDDELRELPCSHVFHV CVDKWLKINA+CPLCK+EVG +N   PS+
Sbjct: 361  EDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINATCPLCKNEVGTSNGGSPSA 419


>ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 424

 Score =  684 bits (1764), Expect = 0.0
 Identities = 329/424 (77%), Positives = 357/424 (84%)
 Frame = +1

Query: 235  MDVTSLGPTSNNQTDQHPLLMEQPENRNGRHHIIDVTRNEEALSTSSHNDQHSEMHLPQN 414
            MDVTSLG  SN QTDQHPLLMEQPE  NG  H+ID+TRN EAL+TSS NDQ+SEMHLPQN
Sbjct: 1    MDVTSLGSNSNTQTDQHPLLMEQPETHNGHQHVIDITRNGEALTTSSRNDQYSEMHLPQN 60

Query: 415  ENQPAGATQDSAHQTXXXXXXXXXXXXXXXXXXGDGYGHRRRSPLNSGLWISVELVVTVS 594
            E+Q AG  Q+S+HQT                  G+GYGH  RSPLNSGLWISVELVVTVS
Sbjct: 61   EDQAAGDAQNSSHQTSSSSAPRLNSRNSASLRRGEGYGHHGRSPLNSGLWISVELVVTVS 120

Query: 595  QIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRXXXXXXXXXXXXXX 774
            QIIASIVVLSLSRNENPQAPLFAW+VGYASGCVATLPILYWRFRNR              
Sbjct: 121  QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSNEQDTSQASQG 180

Query: 775  XXXXXXXXRTYTAIYASHVSDEESGHAAQSAARNAIIPGAFTSRLNGLVDHFKMALDCFF 954
                    R+Y +I+ SHVSDEE+GHA +SA+RN I+PGAFTSRLNGLVDHFKMALDCFF
Sbjct: 181  SSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVDHFKMALDCFF 240

Query: 955  AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 1134
            AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL
Sbjct: 241  AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 300

Query: 1135 GIREDFSQNRGATVECINALPIYKFKLKNNENGDDRDINTALEEGGILAAGTEKERAISG 1314
            GIREDFSQNRGATVE INALPI+KFKLKNNENGDD+D+N A++EGGILAAGTEKER ISG
Sbjct: 301  GIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNAAIDEGGILAAGTEKERMISG 360

Query: 1315 EDAVCCICLAKYADDDELRELPCSHVFHVGCVDKWLKINASCPLCKSEVGANNEEPPSSW 1494
            EDAVCCICLAKYADDDELRELPCSH FHV CVDKWLKINA+CPLCK+EVG +N   PS+W
Sbjct: 361  EDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLCKNEVGTSNGGSPSAW 420

Query: 1495 DSNS 1506
            +S++
Sbjct: 421  NSST 424


>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
            product [Vitis vinifera]
          Length = 416

 Score =  532 bits (1370), Expect = e-148
 Identities = 265/425 (62%), Positives = 308/425 (72%)
 Frame = +1

Query: 235  MDVTSLGPTSNNQTDQHPLLMEQPENRNGRHHIIDVTRNEEALSTSSHNDQHSEMHLPQN 414
            M + SL P S +QT ++PLLME+ EN   R HIID+TRN++A S+SSH+D H  M+ PQ+
Sbjct: 1    MAIPSLEPHSGSQTYKYPLLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQH 60

Query: 415  ENQPAGATQDSAHQTXXXXXXXXXXXXXXXXXXGDGYGHRRRSPLNSGLWISVELVVTVS 594
            E +P+ +TQ   +QT                   DGY  RRRSPLNSGLWISVELVVTVS
Sbjct: 61   EERPSSSTQTPTNQTSSNRLNSRNSSFMRR---SDGYSRRRRSPLNSGLWISVELVVTVS 117

Query: 595  QIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRXXXXXXXXXXXXXX 774
            QIIASIVVLSLSR+ENP+APLFAWVVGYASGC ATLPILYWR+R R              
Sbjct: 118  QIIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQT----------- 166

Query: 775  XXXXXXXXRTYTAIYASHVSDEESGHAAQSAARNAIIPGAFTSRLNGLVDHFKMALDCFF 954
                              +S  ++   A +A R +   G F  R +G+VDHFKMALDCFF
Sbjct: 167  ------------------ISVNQASETAGAATRRSRFVGIFRMRFSGMVDHFKMALDCFF 208

Query: 955  AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 1134
            AVWFVVGNVWIFGGH+SPSDAP+LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS+L
Sbjct: 209  AVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISIL 268

Query: 1135 GIREDFSQNRGATVECINALPIYKFKLKNNENGDDRDINTALEEGGILAAGTEKERAISG 1314
            G RED SQ RGA  E I+ALP YKFKLK N + DD+++N+   EGG+LAAGTEKERAISG
Sbjct: 269  GFREDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEKERAISG 328

Query: 1315 EDAVCCICLAKYADDDELRELPCSHVFHVGCVDKWLKINASCPLCKSEVGANNEEPPSSW 1494
            EDAVCCICLAKYAD++ELRELPC H FHV CVDKWLKINA CPLCK EVG  +   P++ 
Sbjct: 329  EDAVCCICLAKYADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEVGGTSGASPNAT 388

Query: 1495 DSNSH 1509
             ++ H
Sbjct: 389  STSEH 393


>ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
            gi|223543154|gb|EEF44686.1| ring finger protein, putative
            [Ricinus communis]
          Length = 421

 Score =  530 bits (1364), Expect = e-148
 Identities = 269/426 (63%), Positives = 313/426 (73%), Gaps = 3/426 (0%)
 Frame = +1

Query: 235  MDVTSLGPTSN--NQTDQHPLLMEQPENRNGRHHIIDVTRNEEALSTSSHNDQHSEMHLP 408
            MD TS  P S    Q DQ+PLLME+ ++ +   HII +T NE+  S SSHN Q  ++ LP
Sbjct: 1    MDTTSFEPNSTIPTQIDQYPLLMERMDSHDDHEHIISITGNEDGSSNSSHNGQPPDIDLP 60

Query: 409  QNENQPAGATQDSAHQTXXXXXXXXXXXXXXXXXXGDGYGHRRRSPLNSGLWISVELVVT 588
             +E++ +     SAHQ+                  GDGY  RRRSP NSGLWIS+EL VT
Sbjct: 61   YHEDRSS-----SAHQSSSSSLNRLNSRNSTFARRGDGYDRRRRSPFNSGLWISIELFVT 115

Query: 589  VSQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRXXXXXXXXXXXX 768
            V QIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNR            
Sbjct: 116  VGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSGQQDSHQSH 175

Query: 769  XXXXXXXXXXRT-YTAIYASHVSDEESGHAAQSAARNAIIPGAFTSRLNGLVDHFKMALD 945
                       + YTAI  +  S+E++   ++ A  N       +SRLNGL+DHFKMALD
Sbjct: 176  QGSSQNNPPDTSSYTAISVTQASEEDN-FRSELAIANGQTGRPLSSRLNGLMDHFKMALD 234

Query: 946  CFFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 1125
            CFFAVWFVVGNVWIFGGH++P+DAP+LY+LCIVFLTFSCIGYAMPFILCATICCCLPCII
Sbjct: 235  CFFAVWFVVGNVWIFGGHSTPTDAPKLYKLCIVFLTFSCIGYAMPFILCATICCCLPCII 294

Query: 1126 SVLGIREDFSQNRGATVECINALPIYKFKLKNNENGDDRDINTALEEGGILAAGTEKERA 1305
            S+LG REDFSQ RGAT E IN+LPIYKFKL+ +E+ +D D N+   EGG+LA GTEKERA
Sbjct: 295  SLLGFREDFSQTRGATTESINSLPIYKFKLQKSESVNDHD-NSGTGEGGVLAEGTEKERA 353

Query: 1306 ISGEDAVCCICLAKYADDDELRELPCSHVFHVGCVDKWLKINASCPLCKSEVGANNEEPP 1485
            ISGEDA+CCICL KYAD+DELRELPCSHVFHV CVDKWLKINASCPLCKSE+G ++   P
Sbjct: 354  ISGEDAICCICLNKYADNDELRELPCSHVFHVDCVDKWLKINASCPLCKSELGESSSAQP 413

Query: 1486 SSWDSN 1503
            S+ DS+
Sbjct: 414  SARDSS 419


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  480 bits (1235), Expect = e-133
 Identities = 245/411 (59%), Positives = 290/411 (70%), Gaps = 1/411 (0%)
 Frame = +1

Query: 235  MDVTSLGPTSNNQTDQHPLLMEQPENRNGRHHIIDVTRNEEALSTSSHNDQHS-EMHLPQ 411
            M + SL   S +Q+D +PLLMEQP N+    HIID+TR+ +A S++S ND  S  +   Q
Sbjct: 1    MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60

Query: 412  NENQPAGATQDSAHQTXXXXXXXXXXXXXXXXXXGDGYGHRRRSPLNSGLWISVELVVTV 591
            ++++PA + +    Q                         RRRSPLNSGLWIS+EL +TV
Sbjct: 61   HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRAD---ARRRRSPLNSGLWISIELALTV 117

Query: 592  SQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRXXXXXXXXXXXXX 771
            SQIIAS+VVLSLSR+E+P APLF W+VGYASGCVATLPILYWRFR+R             
Sbjct: 118  SQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQ 177

Query: 772  XXXXXXXXXRTYTAIYASHVSDEESGHAAQSAARNAIIPGAFTSRLNGLVDHFKMALDCF 951
                         ++  +  S+EE    +  A RN+      ++RL  LV++FKMALDCF
Sbjct: 178  VSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCF 237

Query: 952  FAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISV 1131
            FAVWFVVGNVWIFGGH+S S+AP LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS+
Sbjct: 238  FAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISI 297

Query: 1132 LGIREDFSQNRGATVECINALPIYKFKLKNNENGDDRDINTALEEGGILAAGTEKERAIS 1311
            LG RED +Q RGAT E INALP YKFKLK N NGDDR+ N+   EGG++AAGTE+ER IS
Sbjct: 298  LGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVIS 357

Query: 1312 GEDAVCCICLAKYADDDELRELPCSHVFHVGCVDKWLKINASCPLCKSEVG 1464
            GEDAVCCICLAKYA++DELRELPCSH FH  CVDKWLKINA CPLCK EVG
Sbjct: 358  GEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVG 408


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