BLASTX nr result

ID: Glycyrrhiza24_contig00009880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009880
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620298.1| F-box/WD-40 repeat-containing protein [Medic...   194   7e-48
ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548...   187   9e-46
gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma...   187   9e-46
ref|XP_003613526.1| F-box protein [Medicago truncatula] gi|35551...   186   3e-45
ref|XP_003617997.1| hypothetical protein MTR_5g097850 [Medicago ...   181   1e-43

>ref|XP_003620298.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|357500033|ref|XP_003620305.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
           gi|355495313|gb|AES76516.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
           gi|355495320|gb|AES76523.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 397

 Score =  194 bits (494), Expect = 7e-48
 Identities = 111/195 (56%), Positives = 132/195 (67%), Gaps = 2/195 (1%)
 Frame = -2

Query: 587 RFVTFMELEEGPPLWEIYSLRSNCWRKLDANLPICDPNFFFVPG--VYMDGVCHWWCRPS 414
           R+V F  LE   PLWEIYSLRSN WR+L  ++P    +   + G  VYMDGVCHW     
Sbjct: 197 RYVWFT-LEYLEPLWEIYSLRSNMWRELYVDMPY---SLDCIDGTQVYMDGVCHWLSEED 252

Query: 413 TNDGEDCLASFDFSNEVFFTTPTPPDMDDIRAFSNSTTGSFYSGCVFRQLVVLNGSIAFV 234
           +N+ E CL SF FSNE FFTTP P +++D   +S+          ++  L VLNGSIA V
Sbjct: 253 SNE-ESCLVSFYFSNEGFFTTPLPSEVED---WSDDLA-------LWLNLAVLNGSIALV 301

Query: 233 SYYTPEAETTTFHISILGEFGVKESWTKAFIVGPLSCLKYPIGAGKKGDIFFIKKDGELA 54
           SY+    ETT FHISILG+FGVKESWTK FIVGPLSC+K PIG G KG+IFFI+KD EL 
Sbjct: 302 SYHK---ETTNFHISILGDFGVKESWTKLFIVGPLSCVKRPIGVGTKGEIFFIRKDEELV 358

Query: 53  LFDLSTHMIEELGVK 9
             DLST MIEE+G K
Sbjct: 359 WLDLSTQMIEEVGYK 373


>ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1|
           F-box protein [Medicago truncatula]
          Length = 460

 Score =  187 bits (476), Expect = 9e-46
 Identities = 104/187 (55%), Positives = 122/187 (65%), Gaps = 4/187 (2%)
 Frame = -2

Query: 551 PLWEIYSLRSNCWRKLDANLPICDPNFFFVPGV--YMDGVCHWWCR--PSTNDGEDCLAS 384
           PLWEIYSLRSN W+KLD ++ +          V  YMDG+CHWW +    ++DGE    S
Sbjct: 225 PLWEIYSLRSNSWKKLDVDMSMVMSPETREETVRFYMDGMCHWWDKIEKDSDDGETYFVS 284

Query: 383 FDFSNEVFFTTPTPPDMDDIRAFSNSTTGSFYSGCVFRQLVVLNGSIAFVSYYTPEAETT 204
           FD +NEV FTTP P D+DD          +F    V RQLV+LN SI  +SY     ET 
Sbjct: 285 FDVTNEVCFTTPMPSDIDD----------TFDIRLVKRQLVMLNRSIGLISY---SGETN 331

Query: 203 TFHISILGEFGVKESWTKAFIVGPLSCLKYPIGAGKKGDIFFIKKDGELALFDLSTHMIE 24
           T H+SILGE GVKESWTK FIVG L  +KYPI AGK GDIFFIKKDGELA F+L T  I+
Sbjct: 332 TLHVSILGEIGVKESWTKLFIVGSLPHVKYPIEAGKNGDIFFIKKDGELACFNLDTQTIK 391

Query: 23  ELGVKED 3
           ELGV+ D
Sbjct: 392 ELGVEGD 398


>gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago
           truncatula]
          Length = 438

 Score =  187 bits (476), Expect = 9e-46
 Identities = 104/187 (55%), Positives = 122/187 (65%), Gaps = 4/187 (2%)
 Frame = -2

Query: 551 PLWEIYSLRSNCWRKLDANLPICDPNFFFVPGV--YMDGVCHWWCR--PSTNDGEDCLAS 384
           PLWEIYSLRSN W+KLD ++ +          V  YMDG+CHWW +    ++DGE    S
Sbjct: 225 PLWEIYSLRSNSWKKLDVDMSMVMSPETREETVRFYMDGMCHWWDKIEKDSDDGETYFVS 284

Query: 383 FDFSNEVFFTTPTPPDMDDIRAFSNSTTGSFYSGCVFRQLVVLNGSIAFVSYYTPEAETT 204
           FD +NEV FTTP P D+DD          +F    V RQLV+LN SI  +SY     ET 
Sbjct: 285 FDVTNEVCFTTPMPSDIDD----------TFDIRLVKRQLVMLNRSIGLISY---SGETN 331

Query: 203 TFHISILGEFGVKESWTKAFIVGPLSCLKYPIGAGKKGDIFFIKKDGELALFDLSTHMIE 24
           T H+SILGE GVKESWTK FIVG L  +KYPI AGK GDIFFIKKDGELA F+L T  I+
Sbjct: 332 TLHVSILGEIGVKESWTKLFIVGSLPHVKYPIEAGKNGDIFFIKKDGELACFNLDTQTIK 391

Query: 23  ELGVKED 3
           ELGV+ D
Sbjct: 392 ELGVEGD 398


>ref|XP_003613526.1| F-box protein [Medicago truncatula] gi|355514861|gb|AES96484.1|
           F-box protein [Medicago truncatula]
          Length = 455

 Score =  186 bits (471), Expect = 3e-45
 Identities = 104/186 (55%), Positives = 127/186 (68%), Gaps = 7/186 (3%)
 Frame = -2

Query: 548 LWEIYSLRSNCWRKLDANL---PICDPNFFFVPGVYMDGVCHWWCRPSTNDGEDCLASFD 378
           +WEIYSLR+N WRKLD ++   P+C+        +Y+DG+ HW C   T++ E  L SFD
Sbjct: 197 IWEIYSLRNNSWRKLDVDMQKSPMCENQ------LYIDGLSHWLCYGETHN-ETHLLSFD 249

Query: 377 FSNEVFFTTPTPPDMDDIRAFSNSTTGSFYSGCVFRQLVVLNGSIAFVSYYTPEAETTTF 198
           +SNEVF TTP P DMDD R   NS         V+R LV+L+GSIAF+  Y    ET TF
Sbjct: 250 WSNEVFLTTPIPSDMDDNRFDCNS---------VWRHLVLLDGSIAFILNYI---ETGTF 297

Query: 197 HISILGEFGVKESWTKAFIVGPLSCLKYPIGAGKKGDIFFIKKD----GELALFDLSTHM 30
           HISILGEFGVK+SW K FI+GPL  L+YPIGAGKKGD+ F KKD    GEL  FDL+T M
Sbjct: 298 HISILGEFGVKKSWIKIFILGPLPYLEYPIGAGKKGDMLFRKKDDDNYGELVWFDLNTQM 357

Query: 29  IEELGV 12
           IE+LG+
Sbjct: 358 IEDLGI 363


>ref|XP_003617997.1| hypothetical protein MTR_5g097850 [Medicago truncatula]
           gi|355519332|gb|AET00956.1| hypothetical protein
           MTR_5g097850 [Medicago truncatula]
          Length = 368

 Score =  181 bits (458), Expect = 1e-43
 Identities = 103/177 (58%), Positives = 116/177 (65%)
 Frame = -2

Query: 542 EIYSLRSNCWRKLDANLPICDPNFFFVPGVYMDGVCHWWCRPSTNDGEDCLASFDFSNEV 363
           EIYSL +N WRK+D  +   D        VYMDG+ HWW    T+     L SFDFSNE 
Sbjct: 175 EIYSLNNNSWRKIDCGMHHSDK---CGEEVYMDGMSHWWDIEVTHT---YLVSFDFSNES 228

Query: 362 FFTTPTPPDMDDIRAFSNSTTGSFYSGCVFRQLVVLNGSIAFVSYYTPEAETTTFHISIL 183
           F TTP P    D   F  +         + RQLVVLNGS+AF++ Y    ETTTFHISIL
Sbjct: 229 FITTPIPSFEGDTFDFDFNYNKKRQ---LVRQLVVLNGSVAFIANYK---ETTTFHISIL 282

Query: 182 GEFGVKESWTKAFIVGPLSCLKYPIGAGKKGDIFFIKKDGELALFDLSTHMIEELGV 12
           GE GVKESWTK FIVGPL CL+YPIGAGKKG+I  IKKD ELA FDLST MIEE+GV
Sbjct: 283 GELGVKESWTKVFIVGPLPCLEYPIGAGKKGNILIIKKDNELAWFDLSTGMIEEIGV 339


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