BLASTX nr result

ID: Glycyrrhiza24_contig00009879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009879
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   199   5e-49
ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medic...   194   1e-47
ref|XP_003594132.1| F-box/WD-40 repeat-containing protein [Medic...   191   1e-46
gb|ABN09747.1| Cyclin-like F-box; F-box protein interaction doma...   191   1e-46
ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...   190   2e-46

>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  199 bits (505), Expect = 5e-49
 Identities = 110/209 (52%), Positives = 131/209 (62%), Gaps = 14/209 (6%)
 Frame = +3

Query: 51  NHIPDDLAFSILSKLPPKSLKRFGCLCKSWGLLSENPHFMSMFCNHFISSDHPYYDGTSL 230
           NHIPDD+AF ILSKL  K+LKRF C+ KSW  L ENP+F+SMFCN+FI  DH +YD T L
Sbjct: 10  NHIPDDVAFFILSKLSLKALKRFTCVRKSWVHLFENPNFISMFCNNFILKDHSFYDDTCL 69

Query: 231 LLLYTTKPAVQGEPIHTQLYLLSGERFESRVKLDWPPPFQERD-DYIVIHGSVNGTLCIE 407
           LL    K  V G   H  LYLLSGE FE++V L+WPPPFQ  D D  ++   +NGTLC+ 
Sbjct: 70  LL----KQTVPGHYYHCALYLLSGENFENKVILNWPPPFQADDIDMDILGSGINGTLCLH 125

Query: 408 RELKGKKIVLWNPATEEFKVIPPSVIESV--PSVGAIPYGFGYDHVKDDYKVIRFVTFME 581
           R    + IVLWNP   EFKVIPPS I+S          +GFGYD V+DDYKVIR   F +
Sbjct: 126 R--YHRTIVLWNPTIGEFKVIPPSPIDSQLHDPTSVTLHGFGYDSVRDDYKVIRHAEFHQ 183

Query: 582 LE-----------EGPPLWEIYSLRSNCW 635
                        E   +WE+YSLRS  W
Sbjct: 184 RNAFAGSLIVVPLERRQVWEMYSLRSESW 212


>ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355519226|gb|AET00850.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 474

 Score =  194 bits (493), Expect = 1e-47
 Identities = 104/214 (48%), Positives = 134/214 (62%), Gaps = 20/214 (9%)
 Frame = +3

Query: 54  HIPDDLAFSILSKLPPKSLKRFGCLCKSWGLLSENPHFMSMFCNHFISSDHPYYDGTSLL 233
           ++P DL   ILSKLP KSLKRF C+CKSW LL ENP+F+ M+CN+ + +DH  YD T L+
Sbjct: 17  NLPHDLVLFILSKLPLKSLKRFICVCKSWSLLFENPNFIKMYCNNILCNDHSDYDDTFLI 76

Query: 234 LLYTTKPAVQGEPIHTQLYLLSGERFESRVKLDWPPPFQERDDYIVIHG--SVNGTLCIE 407
           L         G+  H + YLLS ER E+RVKLDWPP FQE D  I + G  S+NG LC++
Sbjct: 77  LHKLPFNYYHGQ--HCEFYLLSSERLENRVKLDWPPQFQEIDTNIYVVGCVSINGILCLK 134

Query: 408 RELK-GKKIVLWNPATEEFKVIPPSVIESVPSVGAIPY----GFGYDHVKDDYKVIRFVT 572
           +  K  +++VLWNP T E KVIPPS +E++      P+    GFGYDHV DDYKV++ + 
Sbjct: 135 QGFKYTRQVVLWNPTTRESKVIPPSPVENI-RPNRTPFFFLHGFGYDHVSDDYKVVQMID 193

Query: 573 FM-------------ELEEGPPLWEIYSLRSNCW 635
           +              E     PLWEIYSL+SN W
Sbjct: 194 YFPDNDPDDEEDLIWEDRSYDPLWEIYSLKSNSW 227


>ref|XP_003594132.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355483180|gb|AES64383.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  191 bits (485), Expect = 1e-46
 Identities = 109/219 (49%), Positives = 136/219 (62%), Gaps = 26/219 (11%)
 Frame = +3

Query: 57  IPDDLAFSILSKLPPKSLKRFGCLCKSWGLLSENPHFMSMFCNHFISSDHPYYDGTSLLL 236
           I  DLA SI SKLP KSLKRFGC+CKSW +L ++PHFM+++ N+FIS +HP YD TS +L
Sbjct: 12  IHGDLALSITSKLPIKSLKRFGCVCKSWAILFQDPHFMNIYRNNFISKNHPDYDDTSYIL 71

Query: 237 LYTT-KPAVQG-EPIHTQLYLLSGERFESRVKLDWPPPFQERDDYIVIHGS--VNGTLCI 404
            +T   P V G +  H+ LY L+GER E++VKLD   PFQ     IVI  S  +NG LC+
Sbjct: 72  RHTVIVPVVDGDDEFHSSLYFLTGERLENKVKLDCSLPFQYLGQDIVIVSSRGINGILCV 131

Query: 405 ERELKGKKIVLWNPATEEFKVIPPSVIESVPSVG---AIPYGFGYDHVKDDYKVIRFVTF 575
             +    K   WNP+T+E K+IPPS IE+  +      +  GFGYDHV+DDYKVIR V F
Sbjct: 132 S-DRNETKFAFWNPSTKELKIIPPSPIEAATTYRNCYPLILGFGYDHVRDDYKVIRHVRF 190

Query: 576 MEL------EEG-------------PPLWEIYSLRSNCW 635
            EL      E G              P+WEIYSLRSN W
Sbjct: 191 GELNFYECAERGLECKDVPWKYISYQPIWEIYSLRSNSW 229


>gb|ABN09747.1| Cyclin-like F-box; F-box protein interaction domain; Four-helical
           cytokine [Medicago truncatula]
          Length = 405

 Score =  191 bits (485), Expect = 1e-46
 Identities = 109/219 (49%), Positives = 136/219 (62%), Gaps = 26/219 (11%)
 Frame = +3

Query: 57  IPDDLAFSILSKLPPKSLKRFGCLCKSWGLLSENPHFMSMFCNHFISSDHPYYDGTSLLL 236
           I  DLA SI SKLP KSLKRFGC+CKSW +L ++PHFM+++ N+FIS +HP YD TS +L
Sbjct: 9   IHGDLALSITSKLPIKSLKRFGCVCKSWAILFQDPHFMNIYRNNFISKNHPDYDDTSYIL 68

Query: 237 LYTT-KPAVQG-EPIHTQLYLLSGERFESRVKLDWPPPFQERDDYIVIHGS--VNGTLCI 404
            +T   P V G +  H+ LY L+GER E++VKLD   PFQ     IVI  S  +NG LC+
Sbjct: 69  RHTVIVPVVDGDDEFHSSLYFLTGERLENKVKLDCSLPFQYLGQDIVIVSSRGINGILCV 128

Query: 405 ERELKGKKIVLWNPATEEFKVIPPSVIESVPSVG---AIPYGFGYDHVKDDYKVIRFVTF 575
             +    K   WNP+T+E K+IPPS IE+  +      +  GFGYDHV+DDYKVIR V F
Sbjct: 129 S-DRNETKFAFWNPSTKELKIIPPSPIEAATTYRNCYPLILGFGYDHVRDDYKVIRHVRF 187

Query: 576 MEL------EEG-------------PPLWEIYSLRSNCW 635
            EL      E G              P+WEIYSLRSN W
Sbjct: 188 GELNFYECAERGLECKDVPWKYISYQPIWEIYSLRSNSW 226


>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score =  190 bits (483), Expect = 2e-46
 Identities = 115/234 (49%), Positives = 140/234 (59%), Gaps = 24/234 (10%)
 Frame = +3

Query: 6   ARNEEGKVSNQHHNHNHIPDDLAFSILSKLPPKSLKRFGCLCKSWGLLSENPHFMSMFCN 185
           +R E   V      + HIP+DL F +LSKLP KSLKRFGC+ KS+ LL ENP+FM+M+CN
Sbjct: 5   SRMENSMVVANGKVNKHIPNDLIFFVLSKLPLKSLKRFGCVSKSYALLFENPNFMNMYCN 64

Query: 186 HFISSDHPYYDGTSLLLLYTTKPAVQGEPIHTQLYLLSGERFESRVKLDWPPPFQERDDY 365
           +FIS+   Y D T LLL     P    E  H+ +YLLSGERFE+ VK+D PPPF + D  
Sbjct: 65  NFISNSPSYCDDTCLLLQEIISPNSTEE--HSVMYLLSGERFENVVKIDLPPPFCKDDYD 122

Query: 366 IVIHG--SVNGTLCIERELKGKKIVLWNPATEEFKVIPPSVIESVP---SVGAIPYGFGY 530
           I I G  SVNGT C+ +    K  +LWNP TEEFK IPPS I+  P         +GFGY
Sbjct: 123 IHILGSVSVNGTFCLMQ--LDKYFLLWNPTTEEFKAIPPSTIDLAPPDLDHFWDKHGFGY 180

Query: 531 DHVKDDYKVIRFVTF-----------------MELEE--GPPLWEIYSLRSNCW 635
           DHV+DDYKVIR V                   + LE+    P WEIYSL+SN W
Sbjct: 181 DHVRDDYKVIRCVELDPDLIESFCDNLGVEHTLILEDFFDAPSWEIYSLKSNSW 234


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