BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009876
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   114   1e-23
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   105   5e-21
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    96   3e-18
ref|XP_003593885.1| F-box protein SKIP19 [Medicago truncatula] g...    89   5e-16
ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...    82   5e-14

>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   GRRCAEQIKHLRLPYNRTDDYPFKAEVDYGSLDEDYQYAISDRDFLSDDDYYHYPFSGGS 181
           G+RCAEQIK LRLP + TDDYPF+AE+DYGSLDEDY   ISD DFLSDDDY +Y FSGGS
Sbjct: 236 GKRCAEQIKELRLPCDPTDDYPFEAEIDYGSLDEDYPSGISDIDFLSDDDYDYYEFSGGS 295

Query: 182 EFSEYDFE--NYYD 217
           +FSEYD +  +YYD
Sbjct: 296 DFSEYDDDHPDYYD 309


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = +2

Query: 2   GRRCAEQIKHLRLPYNRTDDYPFKAEVDYGSLDEDYQYAISDRDFLSDDDYYHYPFSGGS 181
           G+RCAEQIK LRLP + TDD PF+A+VDYGSLDED   AISD DFLSDDDY +Y FSGGS
Sbjct: 244 GKRCAEQIKELRLPCDPTDDCPFEADVDYGSLDED-SSAISDIDFLSDDDYDYYEFSGGS 302

Query: 182 EFSEYDFENYYDF 220
           +FS+YDF++  D+
Sbjct: 303 DFSDYDFDSDPDY 315


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 8/81 (9%)
 Frame = +2

Query: 2   GRRCAEQIKHLRLPYNRTDDYPFKAEVDYG--------SLDEDYQYAISDRDFLSDDDYY 157
           G+RC EQIK+LRLPY+ TDDYPF+ E+ YG          DEDY   ISD D LSD+DY 
Sbjct: 248 GKRCREQIKYLRLPYDATDDYPFRVELHYGYGSHDEDEDEDEDYPSGISDIDLLSDNDYD 307

Query: 158 HYPFSGGSEFSEYDFENYYDF 220
           +  F GGSEFSEYD+++ YD+
Sbjct: 308 YDEFLGGSEFSEYDYDDDYDY 328


>ref|XP_003593885.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482933|gb|AES64136.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 132

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/72 (58%), Positives = 55/72 (76%)
 Frame = +2

Query: 5   RRCAEQIKHLRLPYNRTDDYPFKAEVDYGSLDEDYQYAISDRDFLSDDDYYHYPFSGGSE 184
           +RC EQIK+L LPY+ +DDY F+AE DYGS DEDY   IS+ D LSD+D+ +Y FS GSE
Sbjct: 64  KRCKEQIKYLLLPYDPSDDYSFQAECDYGSPDEDYPDGISNIDLLSDNDFEYYEFSDGSE 123

Query: 185 FSEYDFENYYDF 220
           FS+   +N++DF
Sbjct: 124 FSD---DNHFDF 132


>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/69 (63%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
 Frame = +2

Query: 2   GRRCAEQIKHLRLPYNRTDDYPFKA-EVDYGSLDEDYQY--AISDRDFLSDDDYYHYPFS 172
           G++C EQIK LRLPY+ T+DYPF+    DYGS DED  Y   ISD D LSDDDY +  FS
Sbjct: 68  GKKCREQIKDLRLPYDATEDYPFQVIAYDYGSPDEDEDYPSGISDMDLLSDDDYEYDEFS 127

Query: 173 GGSEFSEYD 199
            GSEFSEYD
Sbjct: 128 -GSEFSEYD 135