BLASTX nr result

ID: Glycyrrhiza24_contig00009819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009819
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622190.1| ATP-binding cassette transporter subfamily I...   117   2e-24
ref|XP_003542663.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   111   8e-23
ref|XP_002518497.1| Protein sufB, putative [Ricinus communis] gi...   111   8e-23
ref|XP_002305582.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_004153240.1| PREDICTED: UPF0051 protein ABCI8, chloroplas...   109   3e-22

>ref|XP_003622190.1| ATP-binding cassette transporter subfamily I member 15 ABC
           component protein PpABCI15 [Medicago truncatula]
           gi|355497205|gb|AES78408.1| ATP-binding cassette
           transporter subfamily I member 15 ABC component protein
           PpABCI15 [Medicago truncatula]
          Length = 547

 Score =  117 bits (293), Expect = 2e-24
 Identities = 73/136 (53%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
 Frame = +2

Query: 203 MASLLGSSTISPLPPQHTREPTNNTSSRLFLXXXXXXXXXXXXXQKRP-SRLIKSRXXXX 379
           MASLL  S +S L PQ    PT  + S+  L             QK P S+ +K R    
Sbjct: 1   MASLLNGS-VSSLHPQ----PTQTSFSKKALLHQTHFPISKTPKQKSPLSKTVKIRSDVS 55

Query: 380 XXXXXXXXXXX---KIREILRNRDYDKKFGFNLDIDSFSIPKGLSTETIRLISTLKDEPD 550
                         KIREILRNRDYDKKFGFN++IDSF+IPKGLSTETIRLIS LK EPD
Sbjct: 56  YEKRNTSPTSSTDDKIREILRNRDYDKKFGFNINIDSFTIPKGLSTETIRLISALKSEPD 115

Query: 551 WMLEFRLNAFERFSNM 598
           WML FRLNAFE+F  M
Sbjct: 116 WMLNFRLNAFEKFVKM 131


>ref|XP_003542663.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic-like [Glycine max]
          Length = 544

 Score =  111 bits (278), Expect = 8e-23
 Identities = 69/140 (49%), Positives = 83/140 (59%), Gaps = 8/140 (5%)
 Frame = +2

Query: 203 MASLLGSSTI--SPLPPQHTREPTNNTSSRLFLXXXXXXXXXXXXXQKRPSRL------I 358
           MASLL  + +  SPLPPQ  R+P      + FL               +PSRL      +
Sbjct: 1   MASLLRCNGVFLSPLPPQPRRDPI---LPKFFLPQSP---------NPKPSRLLTVRAEV 48

Query: 359 KSRXXXXXXXXXXXXXXXKIREILRNRDYDKKFGFNLDIDSFSIPKGLSTETIRLISTLK 538
           K                 KIREILRNRDYDKKFGF++DI+S +IPKGLS ETIRLIS+LK
Sbjct: 49  KETSSAAATTTTTTSSDDKIREILRNRDYDKKFGFSVDIESLTIPKGLSKETIRLISSLK 108

Query: 539 DEPDWMLEFRLNAFERFSNM 598
           +EP WMLEFRL AFE+F +M
Sbjct: 109 EEPQWMLEFRLKAFEKFLSM 128


>ref|XP_002518497.1| Protein sufB, putative [Ricinus communis]
           gi|223542342|gb|EEF43884.1| Protein sufB, putative
           [Ricinus communis]
          Length = 553

 Score =  111 bits (278), Expect = 8e-23
 Identities = 52/59 (88%), Positives = 57/59 (96%)
 Frame = +2

Query: 413 KIREILRNRDYDKKFGFNLDIDSFSIPKGLSTETIRLISTLKDEPDWMLEFRLNAFERF 589
           KIREILRNRDYDKKFGF +DIDS+SIPKGLS ETIRLIS+LK+EPDWMLEFRLNAFE+F
Sbjct: 76  KIREILRNRDYDKKFGFTMDIDSYSIPKGLSEETIRLISSLKEEPDWMLEFRLNAFEKF 134


>ref|XP_002305582.1| predicted protein [Populus trichocarpa] gi|222848546|gb|EEE86093.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 58/59 (98%)
 Frame = +2

Query: 413 KIREILRNRDYDKKFGFNLDIDSFSIPKGLSTETIRLISTLKDEPDWMLEFRLNAFERF 589
           KIREILRNRDY++KFGFN+DIDSF+IPKGLS ETIRLIS+LK+EPDWML+FRLNAFERF
Sbjct: 77  KIREILRNRDYNEKFGFNMDIDSFTIPKGLSKETIRLISSLKEEPDWMLDFRLNAFERF 135


>ref|XP_004153240.1| PREDICTED: UPF0051 protein ABCI8, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 482

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = +2

Query: 413 KIREILRNRDYDKKFGFNLDIDSFSIPKGLSTETIRLISTLKDEPDWMLEFRLNAFERFS 592
           KI++ILRNRDYD+KFGF +DIDSFSIPKGLS ETIRLIS+LK+EPDWMLEFRLNAFE+F 
Sbjct: 77  KIQDILRNRDYDRKFGFTVDIDSFSIPKGLSKETIRLISSLKEEPDWMLEFRLNAFEKFL 136

Query: 593 NM 598
            M
Sbjct: 137 KM 138


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