BLASTX nr result

ID: Glycyrrhiza24_contig00009815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009815
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             113   1e-23
ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-...   107   1e-21
ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago t...   103   1e-20
ref|XP_002327731.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-...    86   2e-15

>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/135 (47%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
 Frame = +3

Query: 9   DEEDA--EHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXX 182
           D+ D   EH + Q+MEVTFNTGLED+SK+IMEKKDKKSETVW+AYL              
Sbjct: 410 DDSDGGNEHDNAQNMEVTFNTGLEDLSKYIMEKKDKKSETVWDAYLSKKSEKKKAGKNKR 469

Query: 183 XYXXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNEQNKNDKDHELKDRDGVDKASKXX 362
            Y                     FFIEEPAAKKRK  QNK D++   ++ DG+DKASK  
Sbjct: 470 KY-SSDDDDSDDTDQEATEEADDFFIEEPAAKKRKKPQNKEDEEQRHEEIDGLDKASKEE 528

Query: 363 XXXXXADDKGTEAAL 407
                ADDKGT+  +
Sbjct: 529 LELLLADDKGTDTGV 543


>ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-like [Glycine max]
          Length = 696

 Score =  107 bits (267), Expect = 1e-21
 Identities = 64/135 (47%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
 Frame = +3

Query: 9   DEEDA--EHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXX 182
           D+ D   EH +VQ+MEVTFNTGLED+SKHIMEKKDKKSETVW+A+L              
Sbjct: 414 DDSDGGNEHDNVQNMEVTFNTGLEDLSKHIMEKKDKKSETVWDAHLRKKCEKKKTRKNKR 473

Query: 183 XYXXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNEQNKNDKDHELKDRDGVDKASKXX 362
            Y                     FFIEEPA KKRK  +N   KD E K+ +G+D+ASK  
Sbjct: 474 KY-SSDDDDSDDTDQEATEEADDFFIEEPAVKKRKKLEN---KDEEPKEMNGLDEASKEE 529

Query: 363 XXXXXADDKGTEAAL 407
                ADDKGT+  L
Sbjct: 530 LELLLADDKGTDTGL 544


>ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago truncatula]
           gi|355509558|gb|AES90700.1| Pre-rRNA-processing protein
           ESF1 [Medicago truncatula]
          Length = 737

 Score =  103 bits (258), Expect = 1e-20
 Identities = 62/135 (45%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = +3

Query: 6   SDEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXX 185
           SDE+  +  D  DMEVTFNTGL+DISKHIMEKKDKKS TVWE  L               
Sbjct: 455 SDEDGDD--DAMDMEVTFNTGLQDISKHIMEKKDKKSRTVWEECLRKKREKKKARKNKSK 512

Query: 186 YXXXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNE-QNKNDKDHELKDRDGVDKASKXX 362
           +                     F  EEP  KK+K + ++KNDKDH+L+D DGV KASK  
Sbjct: 513 HSSSDDDSDNTDHEATEDADDFFIDEEPDIKKKKKKAESKNDKDHKLQDMDGVAKASKEE 572

Query: 363 XXXXXADDKGTEAAL 407
                ADDKGT   L
Sbjct: 573 LELLLADDKGTGTGL 587


>ref|XP_002327731.1| predicted protein [Populus trichocarpa] gi|222836816|gb|EEE75209.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 61/139 (43%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
 Frame = +3

Query: 3   GSDEEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXX 182
           GSDE D E G  QDMEVTFNTGLED+SK I+EKKDKKSETVWEAYL              
Sbjct: 182 GSDE-DQEEG--QDMEVTFNTGLEDLSKRILEKKDKKSETVWEAYLRKRREKKKARKNQS 238

Query: 183 XY-XXXXXXXXXXXXXXXXXXXXXFFIEEPAAKK---RKNEQNKNDKDHELKDRDGVDKA 350
            Y                      FFIEEP+ KK   +  +  KN ++ +L+D D   +A
Sbjct: 239 KYSSEEDSSDTDEEGMEGIEQPDDFFIEEPSVKKVNSKDYQGKKNKEEKQLQDTDREAEA 298

Query: 351 SKXXXXXXXADDKGTEAAL 407
           SK       ADDKG +  L
Sbjct: 299 SKAELELLLADDKGGKKGL 317


>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 735

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/132 (38%), Positives = 64/132 (48%)
 Frame = +3

Query: 12  EEDAEHGDVQDMEVTFNTGLEDISKHIMEKKDKKSETVWEAYLXXXXXXXXXXXXXXXYX 191
           +ED E    QDMEVTFNTGLEDISK I+EKKDKKSET+WEA+L                 
Sbjct: 441 DEDGEQDGGQDMEVTFNTGLEDISKRILEKKDKKSETLWEAHLRKKHEKRMASRNK---S 497

Query: 192 XXXXXXXXXXXXXXXXXXXXFFIEEPAAKKRKNEQNKNDKDHELKDRDGVDKASKXXXXX 371
                               FF+EEP  K+   ++ KN K  E    DG  +AS+     
Sbjct: 498 ANSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRAELEL 557

Query: 372 XXADDKGTEAAL 407
             ADD G + ++
Sbjct: 558 LLADDDGVDTSI 569


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