BLASTX nr result

ID: Glycyrrhiza24_contig00009803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009803
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   240   9e-62
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   234   8e-60
ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...   222   3e-56
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]   198   5e-49
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   197   9e-49

>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  240 bits (613), Expect = 9e-62
 Identities = 123/173 (71%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3    EMRAASVNNDCYAKSAIKAHLHKHVLHASQELHKHIVITLSNFDELSSSSTFGWESEMSL 182
            +MRAASVNNDCYA SAIK  LHKHVLHASQELHKHI +TL+NFD+LSSSSTFG+ESE S 
Sbjct: 1246 DMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVTLNNFDKLSSSSTFGYESEASP 1305

Query: 183  PKVLGDIIESLAGAILVDSGYNEEVVWQSIRXXXXXXXXXXXXKVHPVRELEELCKKRKY 362
            PKVLGDIIESLAGAILVDSG+N+EVVWQSIR            K+HP+REL ELC+KR Y
Sbjct: 1306 PKVLGDIIESLAGAILVDSGFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSY 1365

Query: 363  -VIEKNVSREDGVLCYRMEVHADGVIHPSEYKGPADRKTAKKLVCKEILKSLQ 518
             ++ ++VSR+DGV  YRM+V ADGVIH  EY GPA R TAKK+ CKEIL SL+
Sbjct: 1366 KIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTGPALRDTAKKIACKEILNSLK 1418


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  234 bits (596), Expect = 8e-60
 Identities = 119/173 (68%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3    EMRAASVNNDCYAKSAIKAHLHKHVLHASQELHKHIVITLSNFDELSSSSTFGWESEMSL 182
            +MR+ASVNNDCYA SAIK  LHKHVLHASQELH H+  TL+ FD+LSS STFG+E+E SL
Sbjct: 1213 DMRSASVNNDCYAWSAIKHGLHKHVLHASQELHMHVSATLNKFDKLSSLSTFGYEAETSL 1272

Query: 183  PKVLGDIIESLAGAILVDSGYNEEVVWQSIRXXXXXXXXXXXXKVHPVRELEELCKKRKY 362
            PKVLGDI+ESLAGAILVDSGYN+EVVWQSIR            K+HP+REL ELC+KR Y
Sbjct: 1273 PKVLGDIVESLAGAILVDSGYNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSY 1332

Query: 363  -VIEKNVSREDGVLCYRMEVHADGVIHPSEYKGPADRKTAKKLVCKEILKSLQ 518
             +I ++VSR+DG+  YRMEV ADG+IH  EYKG A R TAKK+VCKEIL SL+
Sbjct: 1333 KIILEDVSRKDGLTYYRMEVEADGIIHKYEYKGDALRDTAKKIVCKEILNSLK 1385


>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
            gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
            [Medicago truncatula]
          Length = 1418

 Score =  222 bits (565), Expect = 3e-56
 Identities = 112/172 (65%), Positives = 128/172 (74%)
 Frame = +3

Query: 3    EMRAASVNNDCYAKSAIKAHLHKHVLHASQELHKHIVITLSNFDELSSSSTFGWESEMSL 182
            +MR+ASVNNDCYA SAIK  LHKHVLHASQELHKHIV TL  FD+ SSSS FGWESE + 
Sbjct: 1246 DMRSASVNNDCYAMSAIKVQLHKHVLHASQELHKHIVATLDKFDDQSSSS-FGWESEATF 1304

Query: 183  PKVLGDIIESLAGAILVDSGYNEEVVWQSIRXXXXXXXXXXXXKVHPVRELEELCKKRKY 362
            PKVLGDIIESLAGAI VDSGY++E VW+SIR             +HP+REL ELC+K  Y
Sbjct: 1305 PKVLGDIIESLAGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQKMNY 1364

Query: 363  VIEKNVSREDGVLCYRMEVHADGVIHPSEYKGPADRKTAKKLVCKEILKSLQ 518
              EK +SR DGV   ++EV ADGVIH  EYKG  D+KTA +L CK +L SLQ
Sbjct: 1365 TKEKTLSRNDGVTSCKIEVIADGVIHQFEYKGSTDKKTATRLACKGVLHSLQ 1416


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score =  198 bits (503), Expect = 5e-49
 Identities = 99/177 (55%), Positives = 130/177 (73%)
 Frame = +3

Query: 3    EMRAASVNNDCYAKSAIKAHLHKHVLHASQELHKHIVITLSNFDELSSSSTFGWESEMSL 182
            ++R+ASVNNDCYA+SA+KA LH+H+LH+SQELH+HIV+T+ +FD+L   STFGWESE S 
Sbjct: 1119 DLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGBFDKLPXESTFGWESESSF 1178

Query: 183  PKVLGDIIESLAGAILVDSGYNEEVVWQSIRXXXXXXXXXXXXKVHPVRELEELCKKRKY 362
            PKVLGD+IESLAGAILVDS YN+EVV+QSIR            K+HP REL ELC+K  Y
Sbjct: 1179 PKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELXELCQKEHY 1238

Query: 363  VIEKNVSREDGVLCYRMEVHADGVIHPSEYKGPADRKTAKKLVCKEILKSLQLLEAQ 533
             I++ V  ++G     +EV A+G  H  ++   +D++TA KL  KE+LKSL+   AQ
Sbjct: 1239 XIKRVVVSQNGKASVTIEVEANGAKH--KHTSTSDKRTAXKLASKEVLKSLKESIAQ 1293


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  197 bits (501), Expect = 9e-49
 Identities = 100/177 (56%), Positives = 130/177 (73%)
 Frame = +3

Query: 3    EMRAASVNNDCYAKSAIKAHLHKHVLHASQELHKHIVITLSNFDELSSSSTFGWESEMSL 182
            ++R+ASVNNDCYA+SA+KA LH+H+LH+SQELH+HIV+T+ NFD+L   STFGWESE S 
Sbjct: 1217 DLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSF 1276

Query: 183  PKVLGDIIESLAGAILVDSGYNEEVVWQSIRXXXXXXXXXXXXKVHPVRELEELCKKRKY 362
            PKVLGD+IESLAGAILVDS YN+EVV+QSIR            K+HP REL ELC+K  Y
Sbjct: 1277 PKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELGELCQKEHY 1336

Query: 363  VIEKNVSREDGVLCYRMEVHADGVIHPSEYKGPADRKTAKKLVCKEILKSLQLLEAQ 533
             I++ V  ++G     +EV A+G  H  ++   +D++TA KL  KE+LKSL+   AQ
Sbjct: 1337 DIKRVVVSQNGKASVTIEVEANGAKH--KHTSTSDKRTATKLASKEVLKSLKESIAQ 1391


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