BLASTX nr result

ID: Glycyrrhiza24_contig00009783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009783
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537930.1| PREDICTED: flowering time control protein FP...   349   5e-94
ref|XP_003540693.1| PREDICTED: flowering time control protein FP...   331   1e-88
ref|XP_003606822.1| Flowering time control protein FPA [Medicago...   325   1e-86
ref|XP_002529477.1| RNA recognition motif-containing protein, pu...   304   1e-80
ref|XP_004153439.1| PREDICTED: flowering time control protein FP...   296   4e-78

>ref|XP_003537930.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
          Length = 970

 Score =  349 bits (895), Expect = 5e-94
 Identities = 175/240 (72%), Positives = 197/240 (82%), Gaps = 16/240 (6%)
 Frame = -2

Query: 672 MPIPNKALES-EEWGSPSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSYAFVF 496
           MP+P K +   +E   PSNNLWVGNLAA+ TDADLM+LFA+YGALDSVT+YS+RSYAFVF
Sbjct: 1   MPLPAKPMRDFDESAPPSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVF 60

Query: 495 FKRVEDAKAAKSSLQGTPLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEFRKFG 316
           FKRVEDAKAAK++LQGT LRG  ++IEFARPAK CK LWVGGIS AVTKE+LEAEF KFG
Sbjct: 61  FKRVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFHKFG 120

Query: 315 KVEDFKFFRDRNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDFFRSQPTKRDPLVDYG 136
            +EDFKFFRDRNTACVEF NL+DA +AMKIMNGKR+GG+ IRVDF RSQ TKRD L+DYG
Sbjct: 121 TIEDFKFFRDRNTACVEFFNLEDACQAMKIMNGKRIGGEHIRVDFLRSQSTKRDQLLDYG 180

Query: 135 QFQG-------------RPQHSQPSMGR--DGQPSKVLWIGFPPSFQIDEQMLHNAMILF 1
           QFQG             RP HSQP MGR  D QPS +LWIG+PP+ QIDEQMLHNAMILF
Sbjct: 181 QFQGKNLGPTDAYSGQKRPLHSQPPMGRKGDSQPSNILWIGYPPAVQIDEQMLHNAMILF 240


>ref|XP_003540693.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
          Length = 909

 Score =  331 bits (849), Expect = 1e-88
 Identities = 169/227 (74%), Positives = 189/227 (83%), Gaps = 3/227 (1%)
 Frame = -2

Query: 672 MPIPNKALES-EEWGSPSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSYAFVF 496
           MP P K     +E  SPSNNLWVGNLAA+ TDADLM+LFA+YGALDSVT+YS+RSYAFVF
Sbjct: 1   MPFPAKPTRDFDESASPSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVF 60

Query: 495 FKRVEDAKAAKSSLQGTPLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEFRKFG 316
           FKRVEDAKAAK++LQGT LRG  ++IEFARPAK CK LWVGGIS AVTKE+LEAEF+KFG
Sbjct: 61  FKRVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFQKFG 120

Query: 315 KVEDFKFFRDRNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDFFRSQPTKRDPLVDYG 136
           K+EDFKFFRDRNTACVEF NL+DAT+AMKIMNGKR+GG+ IRVDF RSQ TKR  L  Y 
Sbjct: 121 KIEDFKFFRDRNTACVEFFNLEDATQAMKIMNGKRIGGEHIRVDFLRSQSTKRVSLYFYM 180

Query: 135 QFQGRPQHSQPSMG--RDGQPSKVLWIGFPPSFQIDEQMLHNAMILF 1
            F     HSQP MG   D QPS +LWIG+PP+ QIDEQMLHNAMILF
Sbjct: 181 LFLF--AHSQPPMGGKGDSQPSNILWIGYPPAVQIDEQMLHNAMILF 225


>ref|XP_003606822.1| Flowering time control protein FPA [Medicago truncatula]
           gi|355507877|gb|AES89019.1| Flowering time control
           protein FPA [Medicago truncatula]
          Length = 973

 Score =  325 bits (832), Expect = 1e-86
 Identities = 162/230 (70%), Positives = 187/230 (81%), Gaps = 15/230 (6%)
 Frame = -2

Query: 645 SEEWGSPSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSYAFVFFKRVEDAKAA 466
           SE+  +PSNNL+V NL+ + TD+DLMDLF QYGALDSVT+YS+R+YAFVFFKR++DAKAA
Sbjct: 19  SEDSSTPSNNLYVANLSPDVTDSDLMDLFVQYGALDSVTSYSARNYAFVFFKRIDDAKAA 78

Query: 465 KSSLQGTPLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEFRKFGKVEDFKFFRD 286
           K++LQG   RG  +RIEFARPAK CK LWVGGISPAVTKE+LEA+FRKFGKVEDFKFFRD
Sbjct: 79  KNALQGFNFRGNSLRIEFARPAKTCKQLWVGGISPAVTKEDLEADFRKFGKVEDFKFFRD 138

Query: 285 RNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDFFRSQPTKRDPLVDYGQFQG------ 124
           RNTACVEF NLDDA +AMKIMNGK +GG+ IRVDF RS   KRD  +DYGQFQG      
Sbjct: 139 RNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRDQGLDYGQFQGKSFGPS 198

Query: 123 -------RPQHSQPSMGR--DGQPSKVLWIGFPPSFQIDEQMLHNAMILF 1
                  RP +SQP M R  DGQP+ +LWIG+PP+ QIDEQMLHNAMILF
Sbjct: 199 DSYSGHKRPLNSQPLMRRKGDGQPNNILWIGYPPNVQIDEQMLHNAMILF 248


>ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus
           communis] gi|223531035|gb|EEF32887.1| RNA recognition
           motif-containing protein, putative [Ricinus communis]
          Length = 902

 Score =  304 bits (779), Expect = 1e-80
 Identities = 153/217 (70%), Positives = 178/217 (82%), Gaps = 1/217 (0%)
 Frame = -2

Query: 648 ESEEWGSPSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSYAFVFFKRVEDAKA 469
           ES+E  +PSNNLWVGNLA + TD+DLMDLFA+YGALDSVTTYSSRSYAF++FK VEDA A
Sbjct: 13  ESDEPEAPSNNLWVGNLAPDVTDSDLMDLFAKYGALDSVTTYSSRSYAFLYFKHVEDAAA 72

Query: 468 AKSSLQGTPLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEFRKFGKVEDFKFFR 289
           AK +LQGT LRG P++IEFARPAKP K+LWVGGISPAV+KE+LE EF KFGK+E+FKF R
Sbjct: 73  AKDALQGTLLRGNPVKIEFARPAKPSKNLWVGGISPAVSKEQLEEEFLKFGKIEEFKFLR 132

Query: 288 DRNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDFFRSQPTKRDPLVDYGQFQGRPQHS 109
           DRNTA +E++ L+DA  AM+ MNGKRLGGDQIRVDF RSQ  +R  +          QHS
Sbjct: 133 DRNTAFIEYVKLEDALEAMRSMNGKRLGGDQIRVDFLRSQSVRRFTVSVLMPLFVMFQHS 192

Query: 108 QPSMGR-DGQPSKVLWIGFPPSFQIDEQMLHNAMILF 1
           Q S GR +G PS VLW+G+PPS QIDEQMLHNAMILF
Sbjct: 193 QTSGGRKEGPPSNVLWVGYPPSVQIDEQMLHNAMILF 229



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
 Frame = -2

Query: 627 PSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSYAFVFFKRVEDAKAAKSSLQG 448
           PS NLWVG ++   +   L + F ++G ++       R+ AF+ + ++EDA  A  S+ G
Sbjct: 97  PSKNLWVGGISPAVSKEQLEEEFLKFGKIEEFKFLRDRNTAFIEYVKLEDALEAMRSMNG 156

Query: 447 TPLRGIPIRIEFARPAK-----------------------------PCKHLWVGGISPAV 355
             L G  IR++F R                                P   LWVG   P+V
Sbjct: 157 KRLGGDQIRVDFLRSQSVRRFTVSVLMPLFVMFQHSQTSGGRKEGPPSNVLWVG-YPPSV 215

Query: 354 TKEE--LEAEFRKFGKVEDFKFFRDRNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDF 181
             +E  L      FG++E  K F  R+ + VEF ++D+A RA + + G+     +I + +
Sbjct: 216 QIDEQMLHNAMILFGEIERIKSFPARHYSFVEFRSVDEARRAKEGLQGRLFNDPRISIMY 275

Query: 180 FRSQPTKRDPLVDYGQFQGRPQHSQPSMGRDGQPS 76
             S+     P  +Y  F    +  +P +  +  P+
Sbjct: 276 SSSELA---PGKEYSSFNAGGKGPRPEIFNENLPN 307



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -2

Query: 444 PLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEFRKFGKVEDFKFFRDRNTACVE 265
           P++   +  E   P  P  +LWVG ++P VT  +L   F K+G ++    +  R+ A + 
Sbjct: 4   PMKFSRVHKESDEPEAPSNNLWVGNLAPDVTDSDLMDLFAKYGALDSVTTYSSRSYAFLY 63

Query: 264 FLNLDDATRAMKIMNGKRLGGDQIRVDFFR-SQPTK 160
           F +++DA  A   + G  L G+ ++++F R ++P+K
Sbjct: 64  FKHVEDAAAAKDALQGTLLRGNPVKIEFARPAKPSK 99


>ref|XP_004153439.1| PREDICTED: flowering time control protein FPA-like [Cucumis
           sativus]
          Length = 1000

 Score =  296 bits (758), Expect = 4e-78
 Identities = 151/247 (61%), Positives = 189/247 (76%), Gaps = 23/247 (9%)
 Frame = -2

Query: 672 MPIPNKAL-----ESEEWGSPSNNLWVGNLAAEATDADLMDLFAQYGALDSVTTYSSRSY 508
           MP+P K       +S+    PSN+LWVGNL+ E TD DLM+LFAQ+G +DSVT+Y SRSY
Sbjct: 1   MPLPPKLSRPLHRDSDVPEMPSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSY 60

Query: 507 AFVFFKRVEDAKAAKSSLQGTPLRGIPIRIEFARPAKPCKHLWVGGISPAVTKEELEAEF 328
           AF+FFK +EDA+AAK +LQG  LRG  I+IEFARPAKPC++LWVGGISPAV++E+LE EF
Sbjct: 61  AFIFFKHMEDAQAAKEALQGYFLRGNSIKIEFARPAKPCRNLWVGGISPAVSREQLEEEF 120

Query: 327 RKFGKVEDFKFFRDRNTACVEFLNLDDATRAMKIMNGKRLGGDQIRVDFFRSQPTKRDPL 148
            KFGK+++FKF RDRNTA VE++ L+DA++A+++MNGKR+GG+Q+RVDF RSQP +RD  
Sbjct: 121 SKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIGGEQLRVDFLRSQPMRRDQW 180

Query: 147 VD----YGQFQG-------------RPQHSQPS-MGRDGQPSKVLWIGFPPSFQIDEQML 22
            D    +GQ Q              RP H+Q S + RDG PSKVLWIG+PPS QIDEQML
Sbjct: 181 PDTRDGHGQLQARNMGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQML 240

Query: 21  HNAMILF 1
           HNAMILF
Sbjct: 241 HNAMILF 247


Top