BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009762
         (1601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   714   0.0  
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   706   0.0  
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   699   0.0  
emb|CBI16283.3| unnamed protein product [Vitis vinifera]              638   e-180
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   638   e-180

>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 420

 Score =  714 bits (1842), Expect = 0.0
 Identities = 343/385 (89%), Positives = 359/385 (93%)
 Frame = +3

Query: 3    SWESLQEDESGLLRPIDTTAIQHAQYXXXXXXXXXXXXXXXIQKGLIRYLYIVVDLSKAA 182
            SWE+LQEDESGLLRPIDTTAI HAQY               IQKGLIRYLYIVVDLSKAA
Sbjct: 36   SWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAA 95

Query: 183  ADTDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGTAHCWTDLGGSPESHIKAL 362
            ++ DFRPSRMAV+GKQVEAFIREFFDQNPLSHVGLVTIKDG AHC T+LGGSPESHIKAL
Sbjct: 96   SERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELGGSPESHIKAL 155

Query: 363  MGKLECSGDASLQNALELVLENLKQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSK 542
            MGKLECSGDASLQNALELVL  L QIPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSK
Sbjct: 156  MGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSK 215

Query: 543  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKM 722
            IRCSVIGLAAEMF+CKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYAT+NLIKM
Sbjct: 216  IRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKM 275

Query: 723  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYH 902
            GFPQR+AEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECR+CGLTLISSPHLARSYH
Sbjct: 276  GFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYH 335

Query: 903  HLFPIVPFDEVSPSSQNDPSHNFPNTCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDI 1082
            HLFPIV FDEV+PSSQND +H+FPNTCFGCQQSLLSQGNKPGLSV CPKCKQQFCLDCDI
Sbjct: 336  HLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDI 395

Query: 1083 YIHESLHNCPGCESFRHSKSVTAAQ 1157
            Y+HESLHNCPGCES RHSKSVTA+Q
Sbjct: 396  YVHESLHNCPGCESSRHSKSVTASQ 420


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  706 bits (1822), Expect = 0.0
 Identities = 343/389 (88%), Positives = 356/389 (91%), Gaps = 4/389 (1%)
 Frame = +3

Query: 3    SWESLQEDESGLLRPIDTTAIQHAQYXXXXXXXXXXXXXXXIQKGLIRYLYIVVDLSKAA 182
            SWESLQEDESGLLRPIDTTAI HAQY               IQKGLIRYLYIVVDLSKAA
Sbjct: 38   SWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLIRYLYIVVDLSKAA 97

Query: 183  ADTDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGTAHCWTDLGGSPESHIKAL 362
            ++ DFRPSRMAVI KQVE FIREFFDQNPLSHVGLVT KDG A+C TDLGGSPESHIKAL
Sbjct: 98   SERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLTDLGGSPESHIKAL 157

Query: 363  MGKLECSGDASLQNALELVLENLKQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSK 542
            MGKLECSGDASLQNALELV  NL QIPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSK
Sbjct: 158  MGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSK 217

Query: 543  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKM 722
            IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEH+PPPPAIAEYAT+NLIKM
Sbjct: 218  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPPAIAEYATANLIKM 277

Query: 723  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYH 902
            GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECR+CGLTLISSPHLARSYH
Sbjct: 278  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYH 337

Query: 903  HLFPIVPFDEVSPSSQNDPSHNFPNTCFGCQQSLLSQ----GNKPGLSVTCPKCKQQFCL 1070
            HLFPIVPF E+SPSSQNDP+H+FPNTCFGCQQSLLSQ    GNK  LSV+CPKCKQQFCL
Sbjct: 338  HLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAELSVSCPKCKQQFCL 397

Query: 1071 DCDIYIHESLHNCPGCESFRHSKSVTAAQ 1157
            DCD+YIHESLHNCPGCESFRHSKSVT AQ
Sbjct: 398  DCDMYIHESLHNCPGCESFRHSKSVTIAQ 426


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 419

 Score =  699 bits (1805), Expect = 0.0
 Identities = 338/385 (87%), Positives = 355/385 (92%)
 Frame = +3

Query: 3    SWESLQEDESGLLRPIDTTAIQHAQYXXXXXXXXXXXXXXXIQKGLIRYLYIVVDLSKAA 182
            SWE+LQEDESGLLRPIDTTAI HAQY               IQKGLIRYLYIVVDLSKAA
Sbjct: 36   SWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAA 95

Query: 183  ADTDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGTAHCWTDLGGSPESHIKAL 362
            ++ DFRPSRM V+GKQVEAFIREFFDQNPLSHVGLVTIKDG AHC T+LGGSPESHIKAL
Sbjct: 96   SERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELGGSPESHIKAL 155

Query: 363  MGKLECSGDASLQNALELVLENLKQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSK 542
            MGKLECSGDASLQNALELVL  L QIPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSK
Sbjct: 156  MGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSK 215

Query: 543  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKM 722
            IRCSVIGLAAEMF+CKHLC+ETGGTYSVALDESHFKELILEHAPPPPAIAEY+T+NLIKM
Sbjct: 216  IRCSVIGLAAEMFVCKHLCEETGGTYSVALDESHFKELILEHAPPPPAIAEYSTANLIKM 275

Query: 723  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYH 902
            GFPQR+AEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECR+CGLTLISSPHLARSYH
Sbjct: 276  GFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYH 335

Query: 903  HLFPIVPFDEVSPSSQNDPSHNFPNTCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDI 1082
            HLFPIV FDEV+P SQ D S +FPNTCFGCQQSLLSQGNKPGLSV CPKCKQQFCLDCDI
Sbjct: 336  HLFPIVMFDEVTP-SQKDSSRSFPNTCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDI 394

Query: 1083 YIHESLHNCPGCESFRHSKSVTAAQ 1157
            Y+HESLHNCPGCES RHSKSVTA+Q
Sbjct: 395  YVHESLHNCPGCESSRHSKSVTASQ 419


>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  638 bits (1645), Expect = e-180
 Identities = 302/385 (78%), Positives = 331/385 (85%)
 Frame = +3

Query: 3    SWESLQEDESGLLRPIDTTAIQHAQYXXXXXXXXXXXXXXXIQKGLIRYLYIVVDLSKAA 182
            SWESLQEDESGLLRPID   I HAQY               IQKGLIRYLYIVVDLS+AA
Sbjct: 109  SWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAA 168

Query: 183  ADTDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGTAHCWTDLGGSPESHIKAL 362
            ++ DF+PSRMAV+ K +EAFIREFFDQNPLS +GLVTIKDG A C TDLGGSP+SH+KAL
Sbjct: 169  SEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKAL 228

Query: 363  MGKLECSGDASLQNALELVLENLKQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSK 542
            MGKLECSGD+SLQNAL+LV   L QIPSYGHREVLILYSALSTCDPGD+M+TIQECKKSK
Sbjct: 229  MGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSK 288

Query: 543  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKM 722
            IRCSVIGL+AE+FIC+HLCQETGG+YSVALDESHFKEL+LEHAPPPPAIAE+A +NLIKM
Sbjct: 289  IRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKM 348

Query: 723  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYH 902
            GFPQRAAEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECRICGLTL+SSPHLARSYH
Sbjct: 349  GFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYH 408

Query: 903  HLFPIVPFDEVSPSSQNDPSHNFPNTCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDI 1082
            HLFPI PFDEVS S  N+P       CFGCQ+SLL  GNKP L V CPKCKQ FCLDCDI
Sbjct: 409  HLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDI 468

Query: 1083 YIHESLHNCPGCESFRHSKSVTAAQ 1157
            YIHESLHNCPGCESFRHSK V+  +
Sbjct: 469  YIHESLHNCPGCESFRHSKIVSVTE 493


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  638 bits (1645), Expect = e-180
 Identities = 302/385 (78%), Positives = 331/385 (85%)
 Frame = +3

Query: 3    SWESLQEDESGLLRPIDTTAIQHAQYXXXXXXXXXXXXXXXIQKGLIRYLYIVVDLSKAA 182
            SWESLQEDESGLLRPID   I HAQY               IQKGLIRYLYIVVDLS+AA
Sbjct: 48   SWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAA 107

Query: 183  ADTDFRPSRMAVIGKQVEAFIREFFDQNPLSHVGLVTIKDGTAHCWTDLGGSPESHIKAL 362
            ++ DF+PSRMAV+ K +EAFIREFFDQNPLS +GLVTIKDG A C TDLGGSP+SH+KAL
Sbjct: 108  SEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKAL 167

Query: 363  MGKLECSGDASLQNALELVLENLKQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSK 542
            MGKLECSGD+SLQNAL+LV   L QIPSYGHREVLILYSALSTCDPGD+M+TIQECKKSK
Sbjct: 168  MGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSK 227

Query: 543  IRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKM 722
            IRCSVIGL+AE+FIC+HLCQETGG+YSVALDESHFKEL+LEHAPPPPAIAE+A +NLIKM
Sbjct: 228  IRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKM 287

Query: 723  GFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYH 902
            GFPQRAAEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECRICGLTL+SSPHLARSYH
Sbjct: 288  GFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYH 347

Query: 903  HLFPIVPFDEVSPSSQNDPSHNFPNTCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDI 1082
            HLFPI PFDEVS S  N+P       CFGCQ+SLL  GNKP L V CPKCKQ FCLDCDI
Sbjct: 348  HLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDI 407

Query: 1083 YIHESLHNCPGCESFRHSKSVTAAQ 1157
            YIHESLHNCPGCESFRHSK V+  +
Sbjct: 408  YIHESLHNCPGCESFRHSKIVSVTE 432