BLASTX nr result

ID: Glycyrrhiza24_contig00009737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009737
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [G...    78   6e-13
ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [G...    74   2e-11
ref|XP_002531259.1| RNA binding protein, putative [Ricinus commu...    73   2e-11
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...    72   4e-11
emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]    72   4e-11

>ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
          Length = 111

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -1

Query: 392 QVQKVRTLNVKGKLKHRGGSFVAKPDYKKAYVTLKKPISFSHDLYPSHVTANANEDNMRN 213
           +V+KVRTLN+KGK K   GS VAKPDYKKAYVTLKKP+SFS D Y    T    ED  + 
Sbjct: 48  EVEKVRTLNMKGKKKRYAGSLVAKPDYKKAYVTLKKPLSFSQDPYHFRSTV---EDKKKE 104

Query: 212 KVLANQC 192
           K+L   C
Sbjct: 105 KMLTTHC 111


>ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
          Length = 113

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/63 (60%), Positives = 45/63 (71%)
 Frame = -1

Query: 392 QVQKVRTLNVKGKLKHRGGSFVAKPDYKKAYVTLKKPISFSHDLYPSHVTANANEDNMRN 213
           +V+KVRTLN+KGK K   GS VAKPDYKKAYVTLKKP+SFS + YP   T    ED  + 
Sbjct: 49  EVEKVRTLNMKGKKKRYAGSLVAKPDYKKAYVTLKKPLSFSQNPYPFGSTV---EDKKKE 105

Query: 212 KVL 204
            +L
Sbjct: 106 NML 108


>ref|XP_002531259.1| RNA binding protein, putative [Ricinus communis]
           gi|223529144|gb|EEF31123.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 174

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = -1

Query: 392 QVQKVRTLNVKGKLKHRGGSFVAKPDYKKAYVTLKKPISFSHDLYPSHVTANANE 228
           +V KVRTLN++GK K RGG   AKPDYKKAY+TLK P+S S DLYP  + A   E
Sbjct: 55  EVDKVRTLNMEGKKKKRGGFLAAKPDYKKAYITLKNPLSISPDLYPVRIIAEDKE 109


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -1

Query: 392 QVQKVRTLNVKGKLKHRGGSFVAKPDYKKAYVTLKKPISFSHDLYP 255
           +V+KVRTLN++GK K RGG  +AKPDYKKAY+TLK P+S S DLYP
Sbjct: 55  EVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYP 100


>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -1

Query: 392 QVQKVRTLNVKGKLKHRGGSFVAKPDYKKAYVTLKKPISFSHDLYP 255
           +V+KVRTLN++GK K RGG  +AKPDYKKAY+TLK P+S S DLYP
Sbjct: 364 EVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYP 409


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