BLASTX nr result

ID: Glycyrrhiza24_contig00009714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009714
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   209   2e-52
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   209   2e-52
ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   204   6e-51
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   200   1e-49
ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like...   196   1e-48

>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  209 bits (532), Expect = 2e-52
 Identities = 111/127 (87%), Positives = 112/127 (88%)
 Frame = -3

Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485

Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24
               TQDKSGAKRVDLLRGQK+DKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED
Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545

Query: 23  FSDMVAE 3
           FSDMVAE
Sbjct: 546 FSDMVAE 552


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  209 bits (532), Expect = 2e-52
 Identities = 111/127 (87%), Positives = 112/127 (88%)
 Frame = -3

Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485

Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24
               TQDKSGAKRVDLLRGQK+DKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED
Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545

Query: 23  FSDMVAE 3
           FSDMVAE
Sbjct: 546 FSDMVAE 552


>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  204 bits (519), Expect = 6e-51
 Identities = 108/127 (85%), Positives = 111/127 (87%)
 Frame = -3

Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPE+PLYQVLEEKEEKIAP           
Sbjct: 427 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKIAPGTLLGTTHTYV 486

Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24
               TQDKSGAKRVDLLRGQKSDKVDVTL PEEL+AMENVLPAKYEEAREEEKLR+QRED
Sbjct: 487 VNTGTQDKSGAKRVDLLRGQKSDKVDVTLLPEELDAMENVLPAKYEEAREEEKLRNQRED 546

Query: 23  FSDMVAE 3
           FSDMVAE
Sbjct: 547 FSDMVAE 553


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  200 bits (508), Expect = 1e-49
 Identities = 104/126 (82%), Positives = 110/126 (87%)
 Frame = -3

Query: 380 GIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXXX 201
           GI+SVDS SSTPTGVETPDVIDLRKQQRKEP+RPLYQVLEEKEE++AP            
Sbjct: 432 GIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPGTLLGTSHTYVI 491

Query: 200 XXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQREDF 21
              TQDK+GAKRVDLLRGQKSDKVDVTL+PEELEAMENVLPAKYEEAREEEKLRSQREDF
Sbjct: 492 SGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDF 551

Query: 20  SDMVAE 3
           SDMVAE
Sbjct: 552 SDMVAE 557


>ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like, partial [Vitis
           vinifera]
          Length = 279

 Score =  196 bits (499), Expect = 1e-48
 Identities = 104/127 (81%), Positives = 108/127 (85%)
 Frame = -3

Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204
           AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP           
Sbjct: 130 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 189

Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24
               TQDK+ AKRVDLLRGQK+DKVDVTLQPEELE +ENV+ AKYEEAREEEK RSQRED
Sbjct: 190 VNTGTQDKTAAKRVDLLRGQKTDKVDVTLQPEELEVLENVVAAKYEEAREEEKQRSQRED 249

Query: 23  FSDMVAE 3
           FSDMVAE
Sbjct: 250 FSDMVAE 256


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