BLASTX nr result
ID: Glycyrrhiza24_contig00009714
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00009714 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like... 209 2e-52 ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like... 209 2e-52 ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like... 204 6e-51 ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like... 200 1e-49 ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like... 196 1e-48 >ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 209 bits (532), Expect = 2e-52 Identities = 111/127 (87%), Positives = 112/127 (88%) Frame = -3 Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485 Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24 TQDKSGAKRVDLLRGQK+DKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545 Query: 23 FSDMVAE 3 FSDMVAE Sbjct: 546 FSDMVAE 552 >ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 209 bits (532), Expect = 2e-52 Identities = 111/127 (87%), Positives = 112/127 (88%) Frame = -3 Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 426 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 485 Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24 TQDKSGAKRVDLLRGQK+DKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED Sbjct: 486 VGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 545 Query: 23 FSDMVAE 3 FSDMVAE Sbjct: 546 FSDMVAE 552 >ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 577 Score = 204 bits (519), Expect = 6e-51 Identities = 108/127 (85%), Positives = 111/127 (87%) Frame = -3 Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPE+PLYQVLEEKEEKIAP Sbjct: 427 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKIAPGTLLGTTHTYV 486 Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24 TQDKSGAKRVDLLRGQKSDKVDVTL PEEL+AMENVLPAKYEEAREEEKLR+QRED Sbjct: 487 VNTGTQDKSGAKRVDLLRGQKSDKVDVTLLPEELDAMENVLPAKYEEAREEEKLRNQRED 546 Query: 23 FSDMVAE 3 FSDMVAE Sbjct: 547 FSDMVAE 553 >ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] gi|449515207|ref|XP_004164641.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] Length = 580 Score = 200 bits (508), Expect = 1e-49 Identities = 104/126 (82%), Positives = 110/126 (87%) Frame = -3 Query: 380 GIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXXX 201 GI+SVDS SSTPTGVETPDVIDLRKQQRKEP+RPLYQVLEEKEE++AP Sbjct: 432 GIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPGTLLGTSHTYVI 491 Query: 200 XXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQREDF 21 TQDK+GAKRVDLLRGQKSDKVDVTL+PEELEAMENVLPAKYEEAREEEKLRSQREDF Sbjct: 492 SGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDF 551 Query: 20 SDMVAE 3 SDMVAE Sbjct: 552 SDMVAE 557 >ref|XP_002270799.2| PREDICTED: splicing factor 3B subunit 2-like, partial [Vitis vinifera] Length = 279 Score = 196 bits (499), Expect = 1e-48 Identities = 104/127 (81%), Positives = 108/127 (85%) Frame = -3 Query: 383 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPXXXXXXXXXXX 204 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAP Sbjct: 130 AGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYQVLEEKEEKIAPGTLLGTTHTYV 189 Query: 203 XXXXTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRSQRED 24 TQDK+ AKRVDLLRGQK+DKVDVTLQPEELE +ENV+ AKYEEAREEEK RSQRED Sbjct: 190 VNTGTQDKTAAKRVDLLRGQKTDKVDVTLQPEELEVLENVVAAKYEEAREEEKQRSQRED 249 Query: 23 FSDMVAE 3 FSDMVAE Sbjct: 250 FSDMVAE 256