BLASTX nr result

ID: Glycyrrhiza24_contig00009691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009691
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...   173   1e-41
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   163   1e-38
gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]          162   2e-38
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    162   3e-38

>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  173 bits (439), Expect = 1e-41
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = -1

Query: 231 GGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTT 52
           GG MGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYE+CNSDHPLHNWTT
Sbjct: 41  GGRMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNWTT 100

Query: 51  GAGRDVVPLNVTRNYYF 1
           GAGRDVVPLNVTR+YYF
Sbjct: 101 GAGRDVVPLNVTRHYYF 117


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  163 bits (413), Expect = 1e-38
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = -1

Query: 231 GGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTT 52
           G NMGW +N NYT WA+GKHFYNGDWLFFVYDRNQMN+LEVNKTDYESCNSDHPLHNWT 
Sbjct: 37  GSNMGWTSNVNYTIWAQGKHFYNGDWLFFVYDRNQMNILEVNKTDYESCNSDHPLHNWTR 96

Query: 51  GAGRDVVPLNVTRNYYF 1
           GAGRDVVPLNVTRNYYF
Sbjct: 97  GAGRDVVPLNVTRNYYF 113


>gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]
          Length = 175

 Score =  162 bits (411), Expect = 2e-38
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = -1

Query: 231 GGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTT 52
           GG +GW TN NYT WA+GKHFYNGDWL+FVYDRNQMNVLEVNKTDYESCN+DHPLHNWTT
Sbjct: 34  GGGIGWTTNVNYTVWARGKHFYNGDWLYFVYDRNQMNVLEVNKTDYESCNADHPLHNWTT 93

Query: 51  GAGRDVVPLNVTRNYYF 1
           GAGRDVVPLNVTR+YYF
Sbjct: 94  GAGRDVVPLNVTRHYYF 110


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  162 bits (409), Expect = 3e-38
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = -1

Query: 231 GGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTT 52
           GGN GW+TN NYT WAK KHFYNGDWLFFVYDRNQMNVLEVN+T+YESCNSDHPLHNWTT
Sbjct: 19  GGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYESCNSDHPLHNWTT 78

Query: 51  GAGRDVVPLNVTRNYYF 1
           GAGRDVVPLNVTR YYF
Sbjct: 79  GAGRDVVPLNVTRKYYF 95


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  162 bits (409), Expect = 3e-38
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = -1

Query: 231 GGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTT 52
           GGN GW+TN NYT WAK KHFYNGDWLFFVYDRNQMNVLEVN+T+YESCNSDHPLHNWTT
Sbjct: 31  GGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYESCNSDHPLHNWTT 90

Query: 51  GAGRDVVPLNVTRNYYF 1
           GAGRDVVPLNVTR YYF
Sbjct: 91  GAGRDVVPLNVTRKYYF 107


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