BLASTX nr result
ID: Glycyrrhiza24_contig00009630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00009630
(375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ... 220 1e-55
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi... 216 2e-54
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 168 5e-40
ref|XP_002517120.1| pentatricopeptide repeat-containing protein,... 161 6e-38
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar... 149 3e-34
>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 726
Score = 220 bits (560), Expect = 1e-55
Identities = 103/124 (83%), Positives = 117/124 (94%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
+M+SS ++PD+VILCTVLSACGHAGNLSYGR IHEF+KDNG A+ SHLQTAL+NMY NCG
Sbjct: 212 DMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCG 271
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDLVCWSAMISGYAE 16
AMDLAR++YD LSSKHL+VSTAMLSG+AKLGMV+DAR IFDQMIE+DLVCWSAMISGYAE
Sbjct: 272 AMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAE 331
Query: 15 SDQP 4
SDQP
Sbjct: 332 SDQP 335
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/108 (29%), Positives = 59/108 (54%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM PD + + +V+SAC H G L+ IH ++ +G + AL++MY CG
Sbjct: 344 EMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCG 403
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDL 52
+ ARE+++ + K+++ ++M++ FA G A +F +M E ++
Sbjct: 404 NLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNI 451
>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 216 bits (549), Expect = 2e-54
Identities = 101/124 (81%), Positives = 115/124 (92%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EMK+SG EPDA+ILCTVLSAC HAGNLSYG+AIH+FIKDNG +GSH+QT+LVNMY NCG
Sbjct: 207 EMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCG 266
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDLVCWSAMISGYAE 16
AM LARE+YD+L SKH+VVSTAMLSG+AKLGMV+DAR IFD+M+EKDLVCWSAMISGYAE
Sbjct: 267 AMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAE 326
Query: 15 SDQP 4
S QP
Sbjct: 327 SYQP 330
Score = 68.2 bits (165), Expect = 7e-10
Identities = 32/108 (29%), Positives = 61/108 (56%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM+ + PD + + +V+SAC + G L + IH + NG + AL++MY CG
Sbjct: 339 EMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCG 398
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDL 52
+ ARE+++ + K+++ ++M++ FA G A +F +M E+++
Sbjct: 399 NLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNI 446
>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
protein product [Vitis vinifera]
Length = 727
Score = 168 bits (425), Expect = 5e-40
Identities = 75/124 (60%), Positives = 103/124 (83%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EMK+ VEPD ++L TVLSACG AGNLSYG+ IH+FI +N + + HLQ+ALV MY +CG
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDLVCWSAMISGYAE 16
+MDLA ++++++ K+LV STAM++G++KLG + +AR +F+QM++KDLVCWSAMISGYAE
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332
Query: 15 SDQP 4
SD P
Sbjct: 333 SDSP 336
Score = 82.0 bits (201), Expect = 5e-14
Identities = 38/108 (35%), Positives = 64/108 (59%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM+S G++PD V + +V++AC H G L + IH F+ NG + AL+ MY CG
Sbjct: 345 EMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCG 404
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDL 52
+++ AR ++D++ K+++ T M+S FA G A F QM ++++
Sbjct: 405 SLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = -1
Query: 372 MKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCGA 193
M++ G+ D +L A +L G IH G +QT LV MY CG
Sbjct: 113 MRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGR 172
Query: 192 MDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQM----IEKDLVCWSAMIS 28
+ AR M+D++ + +V + M+ G+ + G+ DA ++F++M +E D + S ++S
Sbjct: 173 IAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLS 231
>ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543755|gb|EEF45283.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 477
Score = 161 bits (407), Expect = 6e-38
Identities = 70/124 (56%), Positives = 98/124 (79%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM+SS VEPD ++L T++SAC A NL YG+ +H+ I +N AL HL++ L+++Y CG
Sbjct: 215 EMRSSNVEPDKMVLSTIISACARAKNLGYGKEVHDLIIENNFALDPHLESGLISLYAGCG 274
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDLVCWSAMISGYAE 16
MD+A+E++ +SS++LVVST M+SG+ K+G + DAR+IF+QM EKDL+CWS MISGYAE
Sbjct: 275 CMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWSIMISGYAE 334
Query: 15 SDQP 4
SDQP
Sbjct: 335 SDQP 338
Score = 80.9 bits (198), Expect = 1e-13
Identities = 37/108 (34%), Positives = 64/108 (59%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM+ G+EPD V + +V+SAC H G L + IH F+ NG + AL++MY CG
Sbjct: 347 EMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVDKNGFGKALSVNNALIDMYAKCG 406
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDL 52
++ AR +++++ ++++ T+M++ FA G A F QM E+++
Sbjct: 407 CLEAARAVFEKMQIRNVISWTSMINAFAIHGDANSALNYFHQMKEENV 454
>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein
[Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 722
Score = 149 bits (375), Expect = 3e-34
Identities = 69/124 (55%), Positives = 92/124 (74%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EMK S V PD +ILC ++SACG GN+ Y RAI+EF+ +N + + +HL TALV MY G
Sbjct: 202 EMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDLVCWSAMISGYAE 16
MD+ARE + ++S ++L VSTAM+SG++K G + DA+VIFDQ +KDLVCW+ MIS Y E
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 15 SDQP 4
SD P
Sbjct: 322 SDYP 325
Score = 73.9 bits (180), Expect = 1e-11
Identities = 34/108 (31%), Positives = 65/108 (60%)
Frame = -1
Query: 375 EMKSSGVEPDAVILCTVLSACGHAGNLSYGRAIHEFIKDNGLALGSHLQTALVNMYVNCG 196
EM SG++PD V + +V+SAC + G L + +H I NGL + AL+NMY CG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 195 AMDLAREMYDELSSKHLVVSTAMLSGFAKLGMVRDARVIFDQMIEKDL 52
+D R++++++ +++V ++M++ + G DA +F +M ++++
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441