BLASTX nr result

ID: Glycyrrhiza24_contig00009564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009564
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34387.1| unnamed protein product [Thellungiella halophila]      61   1e-07
ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus c...    60   2e-07
ref|XP_004173627.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    59   3e-07
ref|XP_001764368.1| predicted protein [Physcomitrella patens sub...    56   3e-06
ref|XP_001782987.1| predicted protein [Physcomitrella patens sub...    55   5e-06

>dbj|BAJ34387.1| unnamed protein product [Thellungiella halophila]
          Length = 474

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/107 (35%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   HHHHHQRQNFPLFQLLEKKE--DQEXXXXXXXXXXXXXXXXXXXXXXXEQQDQYXXXXXX 174
           H HHH R  FP FQLL K++  DQ+                       + Q         
Sbjct: 18  HLHHHHRPTFP-FQLLGKRDPDDQQQQQPSPSSSSLFSLHQHQQLSQSQSQQPQPQQKTT 76

Query: 175 XXXXXXXXXXXXQQQLLITTSDKKPPPKRATAKDRHTKVDGRGRRIR 315
                       + Q  +  + KKPP KRA+ KDRHTKVDGRGRRIR
Sbjct: 77  QPTQKELQTTTQEDQSAVAAAAKKPPLKRASTKDRHTKVDGRGRRIR 123


>ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus communis]
           gi|223538290|gb|EEF39897.1| hypothetical protein
           RCOM_0835810 [Ricinus communis]
          Length = 420

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/99 (39%), Positives = 47/99 (47%)
 Frame = +1

Query: 19  RQNFPLFQLLEKKEDQEXXXXXXXXXXXXXXXXXXXXXXXEQQDQYXXXXXXXXXXXXXX 198
           R NFPL QLLEKK++QE                         Q+Q               
Sbjct: 12  RPNFPL-QLLEKKQEQE-------------------------QEQQQHQQQLPDHHLLQQ 45

Query: 199 XXXXQQQLLITTSDKKPPPKRATAKDRHTKVDGRGRRIR 315
               QQ +  ++S KKPPPKR + KDRHTKV+GRGRRIR
Sbjct: 46  QQQQQQLISSSSSSKKPPPKRTSTKDRHTKVEGRGRRIR 84


>ref|XP_004173627.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP15-like
           [Cucumis sativus]
          Length = 367

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/103 (39%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
 Frame = +1

Query: 16  QRQNFPLFQLLEKKEDQEXXXXXXXXXXXXXXXXXXXXXXXEQQDQYXXXXXXXXXXXXX 195
           +R NFPL QLLEKK+++E                       E+Q Q+             
Sbjct: 10  RRPNFPL-QLLEKKKEEE-----------------------EEQQQHPCSSSANNGGTKT 45

Query: 196 XXXXX---QQQLLITTSDKKPPPKRATAKDRHTKVDGRGRRIR 315
                      L  ++S KKPPPKRAT KDRHTKVDGRGRRIR
Sbjct: 46  TTTITTTPNSNLQSSSSPKKPPPKRATTKDRHTKVDGRGRRIR 88


>ref|XP_001764368.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684520|gb|EDQ70922.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 666

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 211 QQQLLITTSDKKPPPKRATAKDRHTKVDGRGRRIR 315
           QQQL      KKPPPKR + KDRHTKVDGRGRRIR
Sbjct: 218 QQQLAPAAPAKKPPPKRTSTKDRHTKVDGRGRRIR 252


>ref|XP_001782987.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665504|gb|EDQ52186.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 358

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = +1

Query: 211 QQQLLITTSDKKPPPKRATAKDRHTKVDGRGRRIR 315
           QQQ   T   KKPPPKR + KDRHTKVDGRGRRIR
Sbjct: 35  QQQQTPTPPAKKPPPKRTSTKDRHTKVDGRGRRIR 69


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