BLASTX nr result

ID: Glycyrrhiza24_contig00009524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009524
         (1696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592082.1| Polypyrimidine tract-binding protein-like pr...   774   0.0  
ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding prot...   766   0.0  
ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding prot...   749   0.0  
ref|XP_003592083.1| Polypyrimidine tract-binding protein-like pr...   749   0.0  
ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding prot...   747   0.0  

>ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
            truncatula] gi|355481130|gb|AES62333.1| Polypyrimidine
            tract-binding protein-like protein [Medicago truncatula]
            gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
          Length = 443

 Score =  774 bits (1998), Expect = 0.0
 Identities = 379/420 (90%), Positives = 400/420 (95%)
 Frame = +1

Query: 1    QLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQFYANVQPSIRGRNVYVQFSSHQEL 180
            QLFQPFGVITKLVMLRAKNQAL+QMQDVPSAVSAL FY N QPSIRGRNVYVQFSSHQEL
Sbjct: 24   QLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALHFYGNTQPSIRGRNVYVQFSSHQEL 83

Query: 181  TTVDQSQGRGEEPNRILLVTIHHMLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 360
            TT+DQSQGRG+EPNRILLVTIHH+LYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ
Sbjct: 84   TTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 143

Query: 361  YQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 540
            YQS+QS++TAR+ALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR
Sbjct: 144  YQSQQSSITARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 203

Query: 541  PSQPGYGDAGNMYAVPGSGPRAVGFPQMSNXXXXXXXFGGGLPPGITGTNDRCTVLVSNL 720
            P Q GYGDAGNMY V GSGPR VG+PQM N       FGGGLPPGITGTNDRCT+LVSNL
Sbjct: 204  PPQLGYGDAGNMYGVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPGITGTNDRCTLLVSNL 263

Query: 721  NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKQL 900
            NPDRIDEDKLFNLFS+YGNIVRIKLLRNKPDHAL+QMGDGFQAELAVHFLKGAMLF K+L
Sbjct: 264  NPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALIQMGDGFQAELAVHFLKGAMLFDKRL 323

Query: 901  EVNFSKHPSITQGADTHEYSNSSLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDITEEEIV 1080
            EVNFSKHP+ITQGADTH+YSNS+LNRFNRNAAKNYRYCCSPTK+IHLSTLPQDITE+EIV
Sbjct: 324  EVNFSKHPNITQGADTHDYSNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEDEIV 383

Query: 1081 GLLEEHGTIVNSKVFEMNGKKQALVHFETEEQATEALVCKHATSLAGSVIRISYSQLQSI 1260
             LLEEHGTIVNSKVFEMNGKKQ LV FETE+QATEALVCKHATSL+GSVIRISYSQLQ+I
Sbjct: 384  TLLEEHGTIVNSKVFEMNGKKQGLVQFETEDQATEALVCKHATSLSGSVIRISYSQLQNI 443


>ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            [Glycine max]
          Length = 443

 Score =  766 bits (1978), Expect = 0.0
 Identities = 377/420 (89%), Positives = 398/420 (94%)
 Frame = +1

Query: 1    QLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQFYANVQPSIRGRNVYVQFSSHQEL 180
            QLFQPFGVITKLVMLRAKNQAL+QMQDVPSAV+ALQFYANVQPSIRGRNVYVQFSSHQEL
Sbjct: 24   QLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQFYANVQPSIRGRNVYVQFSSHQEL 83

Query: 181  TTVDQSQGRGEEPNRILLVTIHHMLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 360
            TT+DQSQGRG+EPNRILLVT+HHMLYP+TVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ
Sbjct: 84   TTMDQSQGRGDEPNRILLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 143

Query: 361  YQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 540
            YQSRQSAV ARS LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR
Sbjct: 144  YQSRQSAVAARSTLQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 203

Query: 541  PSQPGYGDAGNMYAVPGSGPRAVGFPQMSNXXXXXXXFGGGLPPGITGTNDRCTVLVSNL 720
            PSQPGYGDAGNMYA  GSG RAVGFPQM+N       FGGGLPPGITGTNDRCTVLVSNL
Sbjct: 204  PSQPGYGDAGNMYAAQGSGARAVGFPQMANAAAIAAAFGGGLPPGITGTNDRCTVLVSNL 263

Query: 721  NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKQL 900
            NPDRIDEDKLFNLFSIYGNI+RIKLLRNKPDHAL+QMGDGFQA+LAVHFL+GAMLF K+L
Sbjct: 264  NPDRIDEDKLFNLFSIYGNIMRIKLLRNKPDHALIQMGDGFQAKLAVHFLRGAMLFEKRL 323

Query: 901  EVNFSKHPSITQGADTHEYSNSSLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDITEEEIV 1080
            EVNFSKHP IT GADTHEY +S+LNRFNRNAAKNYRYCC PTK+IHLSTLP DITEEEIV
Sbjct: 324  EVNFSKHPKITPGADTHEYISSNLNRFNRNAAKNYRYCCPPTKMIHLSTLPLDITEEEIV 383

Query: 1081 GLLEEHGTIVNSKVFEMNGKKQALVHFETEEQATEALVCKHATSLAGSVIRISYSQLQSI 1260
             L+EEHG IVNSKVFEMNGKKQALV FE EEQATEALVCKHA++L+GSVIRIS+SQLQ+I
Sbjct: 384  SLVEEHGIIVNSKVFEMNGKKQALVQFENEEQATEALVCKHASTLSGSVIRISFSQLQNI 443


>ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            [Glycine max]
          Length = 439

 Score =  749 bits (1933), Expect = 0.0
 Identities = 371/420 (88%), Positives = 395/420 (94%)
 Frame = +1

Query: 1    QLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQFYANVQPSIRGRNVYVQFSSHQEL 180
            QLFQPFGVITKLVMLRAKNQALLQMQD+PSAV+ALQFYANVQPSIRGRNVYVQFSSHQEL
Sbjct: 24   QLFQPFGVITKLVMLRAKNQALLQMQDIPSAVNALQFYANVQPSIRGRNVYVQFSSHQEL 83

Query: 181  TTVDQSQGRGEEPNRILLVTIHHMLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 360
            TT+DQ+Q R +EPNRILLVT+HHMLYPIT DVL+QVFSPHG VEKIVTFQKSAGFQALIQ
Sbjct: 84   TTMDQNQAREDEPNRILLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQ 143

Query: 361  YQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 540
            YQSRQSAVTARS LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR
Sbjct: 144  YQSRQSAVTARSTLQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 203

Query: 541  PSQPGYGDAGNMYAVPGSGPRAVGFPQMSNXXXXXXXFGGGLPPGITGTNDRCTVLVSNL 720
             SQPGYGDAG M+    SG RA GF QM+N       FGGGLPPGITGTN+RCTVLV+NL
Sbjct: 204  SSQPGYGDAGGMH----SGARAGGFSQMANAAAIAAAFGGGLPPGITGTNERCTVLVANL 259

Query: 721  NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKQL 900
            NPDRIDEDK+FNLFSIYGNIVRIKLLRNKPDHAL+QMGDGFQAELAVHFLKGAMLFGK+L
Sbjct: 260  NPDRIDEDKMFNLFSIYGNIVRIKLLRNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRL 319

Query: 901  EVNFSKHPSITQGADTHEYSNSSLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDITEEEIV 1080
            EVN+SKH +ITQGADTHEY+NS+LNRFNRNAAKNYRYCCSPTK+IHLSTLPQDITEEEIV
Sbjct: 320  EVNYSKHANITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIV 379

Query: 1081 GLLEEHGTIVNSKVFEMNGKKQALVHFETEEQATEALVCKHATSLAGSVIRISYSQLQSI 1260
             LLEEHGTIVNSKVFEMNGKKQALV FETEEQATEALVCKHA+ L+GSV+RIS+SQLQ+I
Sbjct: 380  SLLEEHGTIVNSKVFEMNGKKQALVQFETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


>ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
            truncatula] gi|355481131|gb|AES62334.1| Polypyrimidine
            tract-binding protein-like protein [Medicago truncatula]
          Length = 407

 Score =  749 bits (1933), Expect = 0.0
 Identities = 366/407 (89%), Positives = 387/407 (95%)
 Frame = +1

Query: 40   MLRAKNQALLQMQDVPSAVSALQFYANVQPSIRGRNVYVQFSSHQELTTVDQSQGRGEEP 219
            MLRAKNQAL+QMQDVPSAVSAL FY N QPSIRGRNVYVQFSSHQELTT+DQSQGRG+EP
Sbjct: 1    MLRAKNQALIQMQDVPSAVSALHFYGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEP 60

Query: 220  NRILLVTIHHMLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVTARSA 399
            NRILLVTIHH+LYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQS+QS++TAR+A
Sbjct: 61   NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTA 120

Query: 400  LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDAGNMY 579
            LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRP Q GYGDAGNMY
Sbjct: 121  LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMY 180

Query: 580  AVPGSGPRAVGFPQMSNXXXXXXXFGGGLPPGITGTNDRCTVLVSNLNPDRIDEDKLFNL 759
             V GSGPR VG+PQM N       FGGGLPPGITGTNDRCT+LVSNLNPDRIDEDKLFNL
Sbjct: 181  GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPDRIDEDKLFNL 240

Query: 760  FSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKQLEVNFSKHPSITQG 939
            FS+YGNIVRIKLLRNKPDHAL+QMGDGFQAELAVHFLKGAMLF K+LEVNFSKHP+ITQG
Sbjct: 241  FSLYGNIVRIKLLRNKPDHALIQMGDGFQAELAVHFLKGAMLFDKRLEVNFSKHPNITQG 300

Query: 940  ADTHEYSNSSLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDITEEEIVGLLEEHGTIVNSK 1119
            ADTH+YSNS+LNRFNRNAAKNYRYCCSPTK+IHLSTLPQDITE+EIV LLEEHGTIVNSK
Sbjct: 301  ADTHDYSNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDITEDEIVTLLEEHGTIVNSK 360

Query: 1120 VFEMNGKKQALVHFETEEQATEALVCKHATSLAGSVIRISYSQLQSI 1260
            VFEMNGKKQ LV FETE+QATEALVCKHATSL+GSVIRISYSQLQ+I
Sbjct: 361  VFEMNGKKQGLVQFETEDQATEALVCKHATSLSGSVIRISYSQLQNI 407


>ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
            [Glycine max]
          Length = 439

 Score =  747 bits (1929), Expect = 0.0
 Identities = 370/420 (88%), Positives = 393/420 (93%)
 Frame = +1

Query: 1    QLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQFYANVQPSIRGRNVYVQFSSHQEL 180
            QLFQPFGVITKLVMLRAKNQALLQMQD+PSAV+ALQFYANVQPSIRGRNVYVQFSSHQEL
Sbjct: 24   QLFQPFGVITKLVMLRAKNQALLQMQDIPSAVNALQFYANVQPSIRGRNVYVQFSSHQEL 83

Query: 181  TTVDQSQGRGEEPNRILLVTIHHMLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQ 360
            TT+DQ+Q R +EPNRILLVT+HHMLYPIT DVL+QVFSPHG VEKIVTFQKSAGFQALIQ
Sbjct: 84   TTMDQNQAREDEPNRILLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQ 143

Query: 361  YQSRQSAVTARSALQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 540
            YQSRQSAVTARS LQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR
Sbjct: 144  YQSRQSAVTARSTLQGRNIYDGCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGR 203

Query: 541  PSQPGYGDAGNMYAVPGSGPRAVGFPQMSNXXXXXXXFGGGLPPGITGTNDRCTVLVSNL 720
             SQPGYGDA  MY    SG RA GF QM+N       FGGGLPPGITGTN+RCTVLV+NL
Sbjct: 204  SSQPGYGDAAGMY----SGARAGGFSQMANAAAIAAAFGGGLPPGITGTNERCTVLVANL 259

Query: 721  NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKQL 900
            NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHAL+QMGDGFQAELAVHFLKGAMLFGK+L
Sbjct: 260  NPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRL 319

Query: 901  EVNFSKHPSITQGADTHEYSNSSLNRFNRNAAKNYRYCCSPTKIIHLSTLPQDITEEEIV 1080
            EVN+SKH +ITQGADTHEY NS+LNRFNRNAAKNYRYCCSPTK++HLSTLPQDITEEE+V
Sbjct: 320  EVNYSKHANITQGADTHEYVNSNLNRFNRNAAKNYRYCCSPTKMVHLSTLPQDITEEEVV 379

Query: 1081 GLLEEHGTIVNSKVFEMNGKKQALVHFETEEQATEALVCKHATSLAGSVIRISYSQLQSI 1260
             LLEEHGTIVNSKVFEMNGKKQALV FETEEQATEALVCKHA+ L+GSV+RIS+SQLQ+I
Sbjct: 380  SLLEEHGTIVNSKVFEMNGKKQALVQFETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


Top