BLASTX nr result

ID: Glycyrrhiza24_contig00009495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009495
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84802.1| unknown [Medicago truncatula]                           61   1e-07
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    58   7e-07
ref|XP_002520726.1| potassium channel regulatory factor, putativ...    58   9e-07
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    57   2e-06
ref|XP_002307588.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>gb|ACJ84802.1| unknown [Medicago truncatula]
          Length = 268

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/59 (57%), Positives = 37/59 (62%)
 Frame = +1

Query: 88  MDLLKQELLKKRQSLAEETGGKRVFKRSXXXXXXXXXXXXXXXXXXXAKSHKRQSSSSD 264
           MDLLKQELLKKRQSLAEETGGK+ FKRS                   AKS KR S++SD
Sbjct: 1   MDLLKQELLKKRQSLAEETGGKKFFKRSEIQQKQIQKLREEEKRELEAKSKKRNSTTSD 59


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = +1

Query: 88  MDLLKQELLKKRQSLAEETGGKRVFKRSXXXXXXXXXXXXXXXXXXXAKSHKRQSSSSD 264
           MDLLKQELLKKRQSLA++TGGK+ FKRS                   AKS KR ++SSD
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAKSQKRLATSSD 59


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
           gi|223540111|gb|EEF41688.1| potassium channel regulatory
           factor, putative [Ricinus communis]
          Length = 417

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/59 (57%), Positives = 39/59 (66%)
 Frame = +1

Query: 88  MDLLKQELLKKRQSLAEETGGKRVFKRSXXXXXXXXXXXXXXXXXXXAKSHKRQSSSSD 264
           MDLLKQELLKKRQSLA++TGGKRVFKRS                   AK+ KRQSSS++
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKQELEAKA-KRQSSSTE 58


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = +1

Query: 88  MDLLKQELLKKRQSLAEETGGKRVFKRSXXXXXXXXXXXXXXXXXXXAKSHKRQSSSSD 264
           MDLLKQELLKKRQSLA++TGGK+ FKRS                   AKS KR ++SSD
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLRQQEKRELEAKSLKRLATSSD 59


>ref|XP_002307588.1| predicted protein [Populus trichocarpa] gi|222857037|gb|EEE94584.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/58 (56%), Positives = 37/58 (63%)
 Frame = +1

Query: 88  MDLLKQELLKKRQSLAEETGGKRVFKRSXXXXXXXXXXXXXXXXXXXAKSHKRQSSSS 261
           MDLLKQELLKKRQ+LA++TGGK+ FKRS                   AKS KRQSSSS
Sbjct: 1   MDLLKQELLKKRQTLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAKS-KRQSSSS 57


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