BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009477
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...    95   7e-18
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...    89   4e-16
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ...    85   5e-15
ref|XP_003595020.1| DNA-directed RNA polymerase I subunit rpa49 ...    85   5e-15
ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 ...    85   5e-15

>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/65 (64%), Positives = 54/65 (83%)
 Frame = -3

Query: 197 DNPHKTPPIIGYFPSGFDPVKSSPNCSTGFQLYRHKNMTKRLQLVVSPAGSPVEFVGTSY 18
           ++P+KTPP++GYFPSGFDPVK+     + FQ+YRH++M KRL+LVV P  S VEFVGTSY
Sbjct: 45  EHPNKTPPVVGYFPSGFDPVKNHGGGPSNFQVYRHRSMPKRLELVVRPPRSSVEFVGTSY 104

Query: 17  SGEAA 3
           +GEAA
Sbjct: 105 AGEAA 109


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 412

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = -3

Query: 194 NPHKTPPIIGYFPSGFDPVKSSPNCSTGFQLYRHKNMTKRLQLVVSPAGSPVEFVGTSYS 15
           NP K PP +GYF SGFDPVKSS   ST  Q+YR+K M KR +LVVSPAGS VEFVGTSY 
Sbjct: 24  NPTKMPPFVGYFTSGFDPVKSSSG-STDVQVYRNKVMHKRTELVVSPAGSLVEFVGTSYE 82

Query: 14  GEAA 3
           GEAA
Sbjct: 83  GEAA 86


>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484106|gb|AES65309.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 411

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/63 (69%), Positives = 48/63 (76%)
 Frame = -3

Query: 194 NPHKTPPIIGYFPSGFDPVKSSPNCSTGFQLYRHKNMTKRLQLVVSPAGSPVEFVGTSYS 15
           +P K PP IGYF SGFDPVKSS    T  Q+YR+K M KR +LVVSPAGS VEFVGTSY 
Sbjct: 24  DPSKMPPFIGYFTSGFDPVKSSSG--TDVQVYRNKVMHKRTELVVSPAGSSVEFVGTSYE 81

Query: 14  GEA 6
           GEA
Sbjct: 82  GEA 84


>ref|XP_003595020.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484068|gb|AES65271.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 419

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/63 (69%), Positives = 48/63 (76%)
 Frame = -3

Query: 194 NPHKTPPIIGYFPSGFDPVKSSPNCSTGFQLYRHKNMTKRLQLVVSPAGSPVEFVGTSYS 15
           +P K PP IGYF SGFDPVKSS    T  Q+YR+K M KR +LVVSPAGS VEFVGTSY 
Sbjct: 37  DPSKMPPFIGYFTSGFDPVKSSSG--TDVQVYRNKVMHKRTELVVSPAGSSVEFVGTSYE 94

Query: 14  GEA 6
           GEA
Sbjct: 95  GEA 97


>ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|217073572|gb|ACJ85146.1| unknown [Medicago
           truncatula] gi|355484105|gb|AES65308.1| DNA-directed RNA
           polymerase I subunit rpa49 [Medicago truncatula]
           gi|388522465|gb|AFK49294.1| unknown [Medicago
           truncatula]
          Length = 428

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/63 (69%), Positives = 48/63 (76%)
 Frame = -3

Query: 194 NPHKTPPIIGYFPSGFDPVKSSPNCSTGFQLYRHKNMTKRLQLVVSPAGSPVEFVGTSYS 15
           +P K PP IGYF SGFDPVKSS    T  Q+YR+K M KR +LVVSPAGS VEFVGTSY 
Sbjct: 41  DPSKMPPFIGYFTSGFDPVKSSSG--TDVQVYRNKVMHKRTELVVSPAGSSVEFVGTSYE 98

Query: 14  GEA 6
           GEA
Sbjct: 99  GEA 101