BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00009457
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   275   5e-72
gb|AFK41205.1| unknown [Lotus japonicus]                              235   6e-60
ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 ...   232   6e-59
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ...   226   4e-57
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...   224   1e-56

>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score =  275 bits (704), Expect = 5e-72
 Identities = 144/231 (62%), Positives = 170/231 (73%)
 Frame = +3

Query: 6   KKKKKMDTPPELIQVQAKVQVVHENPHKTPPIIGYFPSGFDPVKSSRNGSTGFQLYRHKN 185
           KKK+     P+  Q++ +V+VV E+P+KTPP++GYFPSGFDPVK+   G + FQ+YRH++
Sbjct: 22  KKKEVEVVQPQSEQIEVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGPSNFQVYRHRS 81

Query: 186 MTKRLQLVVSPAGSPVEFVGTSYSSEAAAGHRAMYALGVFDKEAQTLKVVPIAANKIFRL 365
           M KRL+LVV P  S VEFVGTSY+ EAAA HRA YALGV DKEA TLKVVPIA NKIFRL
Sbjct: 82  MPKRLELVVRPPRSSVEFVGTSYAGEAAARHRAKYALGVLDKEAGTLKVVPIAGNKIFRL 141

Query: 366 DPKVKALEAADKEPAISTMEEMTPQQKAVKVRETTAIFGTXXXXXXXXXXXXXRQDDDLD 545
           +PKVK + A + EPA ST+EEMT QQ   K  ETT+I+GT             RQD+D D
Sbjct: 142 EPKVKGVGAFENEPANSTLEEMTQQQ---KFAETTSIWGTKKDIEKAKKKLALRQDEDPD 198

Query: 546 SQKNLDXXXXXXXXXXXALESTESHVSRNIPPYDASATTPQEAYVLDKIIL 698
           SQ+NLD           ALESTESHVSRNIPPYDASATTPQEAY+LDKIIL
Sbjct: 199 SQRNLDVKMKSVTVNKKALESTESHVSRNIPPYDASATTPQEAYILDKIIL 249


>gb|AFK41205.1| unknown [Lotus japonicus]
          Length = 347

 Score =  235 bits (600), Expect = 6e-60
 Identities = 123/170 (72%), Positives = 135/170 (79%)
 Frame = +3

Query: 186 MTKRLQLVVSPAGSPVEFVGTSYSSEAAAGHRAMYALGVFDKEAQTLKVVPIAANKIFRL 365
           MTKRLQLVVSPAG+PVEFVGTSY+ EAAAGHRAMYALGVFDK+AQTLKVVPIAANKIFRL
Sbjct: 1   MTKRLQLVVSPAGAPVEFVGTSYTGEAAAGHRAMYALGVFDKKAQTLKVVPIAANKIFRL 60

Query: 366 DPKVKALEAADKEPAISTMEEMTPQQKAVKVRETTAIFGTXXXXXXXXXXXXXRQDDDLD 545
           +PKVKALEA DKEPAIST+EE+TP   A+K R+TTA+ GT             RQ DD +
Sbjct: 61  EPKVKALEALDKEPAISTVEELTPADSALKQRQTTAMLGTKRDIERNRRKDALRQGDDPE 120

Query: 546 SQKNLDXXXXXXXXXXXALESTESHVSRNIPPYDASATTPQEAYVLDKII 695
           SQKNL            ALESTE HVSRN+PPYDASATTPQEAY+LDKII
Sbjct: 121 SQKNLGEKVKDVAVNKEALESTEVHVSRNLPPYDASATTPQEAYILDKII 170


>ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|217073572|gb|ACJ85146.1| unknown [Medicago
           truncatula] gi|355484105|gb|AES65308.1| DNA-directed RNA
           polymerase I subunit rpa49 [Medicago truncatula]
           gi|388522465|gb|AFK49294.1| unknown [Medicago
           truncatula]
          Length = 428

 Score =  232 bits (591), Expect = 6e-59
 Identities = 131/237 (55%), Positives = 158/237 (66%), Gaps = 5/237 (2%)
 Frame = +3

Query: 3   TKKKKKMDTPPELIQ--VQAKVQVVHENPHKTPPIIGYFPSGFDPVKSSRNGSTGFQLYR 176
           TKKK   + PPE +   VQAK++VV  +P K PP IGYF SGFDPVKSS    T  Q+YR
Sbjct: 14  TKKKMVTEPPPEPVHEPVQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSS--SGTDVQVYR 71

Query: 177 HKNMTKRLQLVVSPAGSPVEFVGTSYSSEAAAGHR--AMYALGVFDKEAQTLKVVPIAAN 350
           +K M KR +LVVSPAGS VEFVGTSY  EA A  R  A Y LGVFDKE+QTLK+VPI  N
Sbjct: 72  NKVMHKRTELVVSPAGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGN 131

Query: 351 KIFRLDPKVKALEAADKEPA-ISTMEEMTPQQKAVKVRETTAIFGTXXXXXXXXXXXXXR 527
           KIFRL+P+VK +E  +  P  I  +EEMT +Q A K R T A  GT             R
Sbjct: 132 KIFRLEPRVKGVEYKEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMR 191

Query: 528 QDDDLDSQKNLDXXXXXXXXXXXALESTESHVSRNIPPYDASATTPQEAYVLDKIIL 698
            D++ +++KNLD           AL +TE+HV+R+IPPY++SATTPQEAYVLDKIIL
Sbjct: 192 GDEEPEAKKNLDEKMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIIL 248


>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484106|gb|AES65309.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 411

 Score =  226 bits (575), Expect = 4e-57
 Identities = 127/230 (55%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
 Frame = +3

Query: 24  DTPPELIQ--VQAKVQVVHENPHKTPPIIGYFPSGFDPVKSSRNGSTGFQLYRHKNMTKR 197
           + PPE +   VQAK++VV  +P K PP IGYF SGFDPVKSS    T  Q+YR+K M KR
Sbjct: 4   EPPPEPVHEPVQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSS--SGTDVQVYRNKVMHKR 61

Query: 198 LQLVVSPAGSPVEFVGTSYSSEAAAGHR--AMYALGVFDKEAQTLKVVPIAANKIFRLDP 371
            +LVVSPAGS VEFVGTSY  EA A  R  A Y LGVFDKE+QTLK+VPI  NKIFRL+P
Sbjct: 62  TELVVSPAGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEP 121

Query: 372 KVKALEAADKEPA-ISTMEEMTPQQKAVKVRETTAIFGTXXXXXXXXXXXXXRQDDDLDS 548
           +VK +E  +  P  I  +EEMT +Q A K R T A  GT             R D++ ++
Sbjct: 122 RVKGVEYKEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMRGDEEPEA 181

Query: 549 QKNLDXXXXXXXXXXXALESTESHVSRNIPPYDASATTPQEAYVLDKIIL 698
           +KNLD           AL +TE+HV+R+IPPY++SATTPQEAYVLDKIIL
Sbjct: 182 KKNLDEKMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIIL 231


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 412

 Score =  224 bits (572), Expect = 1e-56
 Identities = 129/233 (55%), Positives = 158/233 (67%), Gaps = 7/233 (3%)
 Frame = +3

Query: 21  MDT--PPELIQ--VQAKVQVVHENPHKTPPIIGYFPSGFDPVKSSRNGSTGFQLYRHKNM 188
           MDT  PPE +   VQAK++VV  NP K PP +GYF SGFDPVKSS +GST  Q+YR+K M
Sbjct: 1   MDTEPPPEPVHETVQAKIEVVSSNPTKMPPFVGYFTSGFDPVKSS-SGSTDVQVYRNKVM 59

Query: 189 TKRLQLVVSPAGSPVEFVGTSYSSEAAAGHR--AMYALGVFDKEAQTLKVVPIAANKIFR 362
            KR +LVVSPAGS VEFVGTSY  EAAA  R  A Y LGVFDKE+QTLK+VPI  NKIFR
Sbjct: 60  HKRTELVVSPAGSLVEFVGTSYEGEAAAVARNPATYMLGVFDKESQTLKIVPIGGNKIFR 119

Query: 363 LDPKVKALEAADKEPAISTM-EEMTPQQKAVKVRETTAIFGTXXXXXXXXXXXXXRQDDD 539
           L+P+VK +E  +  P  + M EE+T +Q   K R+  A  GT               D++
Sbjct: 120 LEPRVKGVEYKEPTPTPTKMVEELTAEQWTEKKRKADAALGTKKSKQMLIWLDEMTADEE 179

Query: 540 LDSQKNLDXXXXXXXXXXXALESTESHVSRNIPPYDASATTPQEAYVLDKIIL 698
            +++KNLD           AL +TE+HV+R+IPPY++SATTPQEAYVLDKIIL
Sbjct: 180 PEAKKNLDEKMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIIL 232