BLASTX nr result
ID: Glycyrrhiza24_contig00009413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00009413
(1626 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containi... 523 0.0
ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycin... 499 0.0
ref|XP_003620888.1| Pentatricopeptide repeat-containing protein ... 472 e-179
ref|XP_003620812.1| Pentatricopeptide repeat-containing protein ... 435 e-161
ref|XP_003620907.1| Pentatricopeptide repeat-containing protein ... 433 e-160
>ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
[Glycine max]
Length = 452
Score = 523 bits (1346), Expect(2) = 0.0
Identities = 275/388 (70%), Positives = 311/388 (80%), Gaps = 10/388 (2%)
Frame = +3
Query: 15 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAPP- 191
MELKLH S+AS+ PR PFC YAVP+ S+ RRNGT SRST + PP
Sbjct: 1 MELKLHTSMASI---PR-AVFTHSSSSIPFCAYAVPNASR---RRNGTNNSRSTHKIPPL 53
Query: 192 ---------KLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYVV 344
KL+LD HQNQN P N DLV LCEEG L+QVLELMGQGA+ADY V
Sbjct: 54 CKGNLPNEQKLQLD---HQNQNAPLP---LNVDLVSLCEEGNLDQVLELMGQGAVADYRV 107
Query: 345 YLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKMP 524
YLALL LCE +RSLESGKRVH FLRRS+F R++ELSNRLIGMY KCGS+KDARRVFD++P
Sbjct: 108 YLALLNLCEHTRSLESGKRVHEFLRRSTFRRDVELSNRLIGMYCKCGSVKDARRVFDQIP 167
Query: 525 ERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEGF 704
ERNISSWHLMI GY NGLG DGLLVF+QMKQ G + PDGETF LVLAACA+ EAVEEGF
Sbjct: 168 ERNISSWHLMIGGYAANGLGCDGLLVFQQMKQAG-VPPDGETFELVLAACAQAEAVEEGF 226
Query: 705 LHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFARM 884
LHFESMKE+GIVP MEHYL VINILG +GQLNEAEEFIEK+PIE +GVE W++L NFA+
Sbjct: 227 LHFESMKEHGIVPSMEHYLEVINILGNTGQLNEAEEFIEKIPIE-LGVEAWESLRNFAQK 285
Query: 885 HGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYREDG 1064
HGD DLED A+E+LT LDPSKA ADKLP PPRK+QS +NMLEEKNRVT+YRY++PY+E+
Sbjct: 286 HGDLDLEDHAEEVLTCLDPSKAVADKLPPPPRKKQSDMNMLEEKNRVTEYRYSIPYKEEA 345
Query: 1065 NEKLKGLNGQMREAGYVPDTRYVLHDID 1148
+EKL GL+GQMREAGYVPDTRYVLHDID
Sbjct: 346 HEKLGGLSGQMREAGYVPDTRYVLHDID 373
Score = 184 bits (467), Expect(2) = 0.0
Identities = 86/86 (100%), Positives = 86/86 (100%)
Frame = +1
Query: 1210 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 1389
YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV
Sbjct: 367 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 426
Query: 1390 GRELIVRDNKRFHHFKDGKCSCGDYW 1467
GRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 427 GRELIVRDNKRFHHFKDGKCSCGDYW 452
>ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 499 bits (1284), Expect(2) = 0.0
Identities = 265/388 (68%), Positives = 302/388 (77%), Gaps = 10/388 (2%)
Frame = +3
Query: 15 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAPP- 191
MELKL AS+AS+ PR PFCTY VPD S+ RRNG SRST + P
Sbjct: 1 MELKLRASMASI---PR-AVFTNSSSFVPFCTYTVPDASR---RRNGNTGSRSTHKITPL 53
Query: 192 ---------KLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYVV 344
KLKLD HQNQN N DLV LCEEG L+QVLELMGQGA+ADY V
Sbjct: 54 RKEKHPNEQKLKLD---HQNQNP------LNVDLVALCEEGNLDQVLELMGQGAVADYRV 104
Query: 345 YLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKMP 524
YLALL LCE +RSLESGKRVH LRRS+F ++ELSNRLIGMY KCGS+K+ARRVFD+M
Sbjct: 105 YLALLNLCEHTRSLESGKRVHEILRRSAFRGDVELSNRLIGMYCKCGSVKNARRVFDQML 164
Query: 525 ERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEGF 704
+RN+++WHLMI GYT NGLG DGLLVF+QMKQ + PDGETF LVLAAC++ EAVEEGF
Sbjct: 165 DRNMATWHLMIGGYTSNGLGCDGLLVFQQMKQ-AELPPDGETFELVLAACSQAEAVEEGF 223
Query: 705 LHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFARM 884
LHFESMKEYGIVP MEHYL VINI+G +GQL EAEEFIE +PIE +GVE W++L FAR+
Sbjct: 224 LHFESMKEYGIVPSMEHYLEVINIMGNAGQLKEAEEFIENVPIE-LGVEAWESLRKFARI 282
Query: 885 HGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYREDG 1064
HGD DLED A+ELLT DPSKA ADKLPTPPRK+QS +NMLEEKNR T+YRY++PY+E+
Sbjct: 283 HGDLDLEDCAEELLTRFDPSKAIADKLPTPPRKKQSDVNMLEEKNRATEYRYSIPYKEED 342
Query: 1065 NEKLKGLNGQMREAGYVPDTRYVLHDID 1148
NEKL GL+GQMREAGYVPDTRYVLHDID
Sbjct: 343 NEKLGGLSGQMREAGYVPDTRYVLHDID 370
Score = 184 bits (467), Expect(2) = 0.0
Identities = 86/86 (100%), Positives = 86/86 (100%)
Frame = +1
Query: 1210 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 1389
YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV
Sbjct: 364 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 423
Query: 1390 GRELIVRDNKRFHHFKDGKCSCGDYW 1467
GRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 424 GRELIVRDNKRFHHFKDGKCSCGDYW 449
>ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 446
Score = 472 bits (1214), Expect(2) = e-179
Identities = 248/389 (63%), Positives = 289/389 (74%), Gaps = 11/389 (2%)
Frame = +3
Query: 15 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 188
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 189 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 341
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQAPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 342 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 521
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDKM
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKM 160
Query: 522 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 701
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQG-VVPDEETFALVLAVCALVDGVEEG 219
Query: 702 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 881
+ FESMKEYGIVPGMEHYL V+NI GC+G+L+EA EFIE MPIE GVE+W+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIE-AGVELWETLRNFAR 278
Query: 882 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1061
+HGD + ED A ELLTVLDPSKA ADK+P P RK+QSAINMLEEKNRV++YR N+PY+E+
Sbjct: 279 IHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEE 338
Query: 1062 GNEKLKGLNGQMREAGYVPDTRYVLHDID 1148
G+ KL+GL GQMREAGYVPDTRYVLHDID
Sbjct: 339 GDVKLRGLTGQMREAGYVPDTRYVLHDID 367
Score = 184 bits (467), Expect(2) = e-179
Identities = 86/86 (100%), Positives = 86/86 (100%)
Frame = +1
Query: 1210 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 1389
YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV
Sbjct: 361 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 420
Query: 1390 GRELIVRDNKRFHHFKDGKCSCGDYW 1467
GRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 GRELIVRDNKRFHHFKDGKCSCGDYW 446
>ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 468
Score = 435 bits (1119), Expect(2) = e-161
Identities = 238/389 (61%), Positives = 276/389 (70%), Gaps = 11/389 (2%)
Frame = +3
Query: 15 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 188
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 189 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 341
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQTPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 342 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 521
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDKM
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKM 160
Query: 522 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 701
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQG-VVPDEETFALVLAVCALVDGVEEG 219
Query: 702 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 881
+ FESMKEYGIVPGMEHYL V+NI GC+G L+EA+EFIE MPIE GV+VW+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVVNIFGCAGPLDEAQEFIENMPIE-AGVDVWETLRNFAR 278
Query: 882 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1061
++GD + EDRAK LLTV DPSKA ADK+P P RK+QSAINMLEEKNRV++YR
Sbjct: 279 IYGDLEREDRAK-LLTVRDPSKAAADKMPLPQRKKQSAINMLEEKNRVSEYRC------- 330
Query: 1062 GNEKLKGLNGQMREAGYVPDTRYVLHDID 1148
L GQ+REAGYVPDTRYVLHDID
Sbjct: 331 -------LTGQIREAGYVPDTRYVLHDID 352
Score = 160 bits (404), Expect(2) = e-161
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1210 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 1389
YVLHDIDEEEKEKAL+YHSERLAIAYGLISTPPRT LRIIKNLRICGDCHNAIK MSKIV
Sbjct: 346 YVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIV 405
Query: 1390 GRELIVRDNKRFHHFKDGKCSCGDY 1464
G +LIVRDNKRFHHFKDGKC+ Y
Sbjct: 406 GMKLIVRDNKRFHHFKDGKCAISMY 430
>ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 468
Score = 433 bits (1113), Expect(2) = e-160
Identities = 238/389 (61%), Positives = 275/389 (70%), Gaps = 11/389 (2%)
Frame = +3
Query: 15 MELKLHASIASVVSLPRKGXXXXXXXXTPFCTYAVPDTSKLHPRRNGTIYSRSTQRAP-- 188
MELKL AS+AS S TPFCTYA+ + LHPR+NGT SR T R
Sbjct: 1 MELKLQASMASSSS-----------SSTPFCTYAIHHATNLHPRQNGTNNSRFTPRKTQP 49
Query: 189 ---------PKLKLDERVHQNQNTPFAETSKNADLVGLCEEGKLNQVLELMGQGAIADYV 341
PKL + HQ++N FA +EG +NQVLELMGQGA ADY
Sbjct: 50 LRMGNPSIQPKLNHHQAPHQHKNVNFAH---------FLQEGNVNQVLELMGQGAFADYS 100
Query: 342 VYLALLKLCEDSRSLESGKRVHGFLRRSSFGREIELSNRLIGMYGKCGSMKDARRVFDKM 521
+L+LLKLCED +SLE GKRVH FLRRS FG +EL NRLIG+Y KCGS+KDAR+VFDKM
Sbjct: 101 DFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKM 160
Query: 522 PERNISSWHLMISGYTENGLGDDGLLVFKQMKQEGTIAPDGETFALVLAACARVEAVEEG 701
P+RN+ S +LMI GY NGLG DGLLVFKQM+Q+G + PD ETFALVLA CA V+ VEEG
Sbjct: 161 PDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQG-VVPDEETFALVLAVCALVDGVEEG 219
Query: 702 FLHFESMKEYGIVPGMEHYLRVINILGCSGQLNEAEEFIEKMPIEVVGVEVWQALGNFAR 881
+ FESMKEYGIVPGMEHYL V NI GC+G L+EA+EFIE MPIE GV+VW+ L NFAR
Sbjct: 220 LMQFESMKEYGIVPGMEHYLGVDNIFGCAGPLDEAQEFIENMPIE-AGVDVWETLRNFAR 278
Query: 882 MHGDFDLEDRAKELLTVLDPSKATADKLPTPPRKEQSAINMLEEKNRVTDYRYNVPYRED 1061
++GD + EDRAK LLTV DPSKA ADK+P P RK+QSAINMLEEKNRV++YR
Sbjct: 279 IYGDLEREDRAK-LLTVRDPSKAAADKMPLPQRKKQSAINMLEEKNRVSEYRC------- 330
Query: 1062 GNEKLKGLNGQMREAGYVPDTRYVLHDID 1148
L GQ+REAGYVPDTRYVLHDID
Sbjct: 331 -------LTGQIREAGYVPDTRYVLHDID 352
Score = 160 bits (404), Expect(2) = e-160
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = +1
Query: 1210 YVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIV 1389
YVLHDIDEEEKEKAL+YHSERLAIAYGLISTPPRT LRIIKNLRICGDCHNAIK MSKIV
Sbjct: 346 YVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIV 405
Query: 1390 GRELIVRDNKRFHHFKDGKCSCGDY 1464
G +LIVRDNKRFHHFKDGKC+ Y
Sbjct: 406 GMKLIVRDNKRFHHFKDGKCAISMY 430